Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 0.0e+00 1472.6 759 100.0
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 9.2e-243 844.0 760 61.6
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 4.4e-237 825.1 782 60.7
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 7.6e-237 824.3 691 63.7
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 1.4e-222 776.9 798 55.4
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 9.6e-216 754.2 756 58.6
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 3.1e-214 749.2 708 58.6
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 3.4e-213 745.7 703 58.6
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 2.9e-212 742.7 759 56.9
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 3.8e-212 742.3 719 57.0
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 3.2e-211 739.2 759 56.5
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 4.2e-211 738.8 763 55.8
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 5.5e-211 738.4 760 55.8
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 1.2e-210 737.3 765 56.3
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 3.0e-209 732.6 760 56.6
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 5.1e-209 731.9 759 55.6
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 1.4e-206 723.8 756 55.2
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 1.4e-206 723.8 719 55.5
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 2.5e-203 713.0 769 53.6
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 3.2e-203 712.6 721 55.5
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 9.3e-203 711.1 760 53.9
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 1.2e-202 710.7 756 52.8
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 2.1e-202 709.9 769 53.4
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 2.1e-202 709.9 715 56.9
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 2.7e-202 709.5 813 53.0
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 4.6e-202 708.8 706 56.2
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 7.9e-202 708.0 768 55.6
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 9.7e-200 701.0 763 53.3
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 2.2e-199 699.9 720 54.3
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 3.7e-199 699.1 762 52.6
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 8.2e-199 698.0 638 58.9
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 3.1e-198 696.0 709 55.6
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 4.5e-197 692.2 766 53.5
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 5.5e-195 685.3 764 53.9
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 1.0e-193 681.0 765 52.0
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.8e-193 680.2 796 50.9
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 8.8e-193 677.9 580 61.9
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 9.7e-192 674.5 762 51.7
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 2.2e-191 673.3 671 55.0
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 1.4e-190 670.6 724 53.7
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 3.1e-190 669.5 725 54.3
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 9.1e-190 667.9 762 51.8
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 1.7e-188 663.7 595 60.2
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 3.8e-188 662.5 769 51.5
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 5.0e-188 662.1 722 53.6
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 1.2e-186 657.5 761 50.9
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 1.0e-185 654.4 671 55.9
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 3.9e-185 652.5 759 50.9
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 1.5e-184 650.6 759 51.8
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 8.2e-183 644.8 761 51.1
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 9.1e-182 641.3 757 50.5
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 9.1e-182 641.3 768 51.7
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 1.2e-181 641.0 691 52.7
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 1.2e-181 641.0 766 50.1
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 1.5e-181 640.6 759 49.9
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 2.6e-181 639.8 692 54.6
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 1.9e-179 633.6 691 52.5
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 3.2e-179 632.9 693 52.8
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 1.6e-178 630.6 760 50.7
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 6.1e-178 628.6 684 53.1
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.0e-177 627.9 723 50.9
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 2.3e-177 626.7 756 51.2
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 9.7e-176 621.3 575 57.2
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 3.7e-175 619.4 767 49.5
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 2.0e-173 613.6 757 49.9
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 6.5e-172 608.6 684 52.3
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 6.7e-169 598.6 716 50.3
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 4.4e-168 595.9 766 48.8
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 1.7e-167 594.0 761 48.9
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 7.7e-165 585.1 622 53.1
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 8.5e-164 581.6 768 46.6
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 1.5e-163 580.9 765 48.6
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 3.2e-163 579.7 759 46.5
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 5.5e-163 578.9 776 45.6
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 4.7e-162 575.9 661 50.5
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 4.0e-161 572.8 493 60.4
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 5.2e-161 572.4 774 45.5
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 3.4e-160 569.7 772 46.1
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 1.7e-159 567.4 627 49.9
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 1.1e-158 564.7 756 47.1
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 3.1e-158 563.1 638 50.5
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 1.3e-156 557.8 745 45.9
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 5.0e-156 555.8 818 44.3
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 6.6e-156 555.4 763 45.2
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 3.3e-155 553.1 770 46.2
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 3.6e-154 549.7 769 45.0
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 4.4e-152 542.7 780 44.5
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 2.0e-149 533.9 775 44.3
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 5.0e-148 529.3 751 45.8
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 8.6e-148 528.5 756 45.2
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 8.6e-148 528.5 756 45.2
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 4.0e-145 519.6 524 55.5
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 2.1e-133 480.7 802 39.8
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 4.6e-133 479.6 435 59.3
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 1.8e-129 467.6 707 45.0
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 7.1e-126 455.7 470 55.1
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 1.2e-125 454.9 656 44.1
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 3.5e-125 453.4 550 47.8
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 6.0e-125 452.6 728 39.3
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 1.1e-107 395.2 784 36.5
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 5.6e-107 392.9 717 36.7
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 3.0e-100 370.5 580 42.8
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 1.0e-95 355.5 518 44.4
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 5.1e-92 343.2 523 40.9
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 3.8e-79 300.4 750 31.1
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 1.3e-71 275.4 613 33.4
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 4.2e-62 243.8 360 43.9
Psat2g052360 Pisum sativum HOM05D006071 ORTHO05D007462 2.8e-58 231.1 444 38.1
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 1.2e-56 225.7 338 44.1
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 8.8e-52 209.5 258 49.2
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.5e-43 182.2 187 57.8
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 2.3e-39 168.3 220 46.8
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 3.6e-37 161.0 715 23.6
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 1.8e-36 158.7 225 48.0
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 2.0e-32 145.2 253 42.7
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 4.3e-30 137.5 144 56.9
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 1.2e-29 136.0 625 24.2
Sc07g0003760 Simmondsia chinensis HOM05D006071 ORTHO05D007462 7.5e-27 126.7 142 48.6
Psat2g087520 Pisum sativum HOM05D006071 ORTHO05D007462 9.8e-27 126.3 144 52.8
Actinidia09845 Actinidia chinensis HOM05D006071 ORTHO05D007462 3.3e-22 111.3 107 53.3
Psat0s2046g0120 Pisum sativum HOM05D006071 ORTHO05D007462 4.7e-21 107.5 94 55.3
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 7.1e-17 93.6 122 46.7
Actinidia09844 Actinidia chinensis HOM05D006071 ORTHO05D007462 7.8e-16 90.1 75 62.7
Cre16.g681251 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 8.4e-10 70.1 171 28.1
CDE05G2071 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 2.7e-08 65.1 77 55.8
Atru.chr6.2688 Acer truncatum HOM05D006071 ORTHO05D007462 1.0e-07 63.2 62 58.1
Cpa.g.sc70.72 Carica papaya HOM05D006071 ORTHO05D007462 5.6e-06 57.4 83 38.6


User provided reference genes

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