Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1417 Trochodendron aralioides HOM05D008433 ORTHO05D009918 1.7e-112 409.5 223 100.0
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 2.5e-23 113.2 159 41.5
MBI12_g42093_MAGBIO Magnolia biondii HOM05D008433 ORTHO05D009918 1.3e-16 90.9 177 41.8
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 1.6e-14 84.0 142 40.1
CSS0049417 Camellia sinensis var. sinensis HOM05D008433 ORTHO05D009918 3.7e-14 82.8 164 40.9
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 6.2e-14 82.0 126 41.3
Hma1.2p1_1697F.1_g298100 Hydrangea macrophylla HOM05D008433 ORTHO05D009918 2.0e-12 77.0 166 40.4
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 2.6e-12 76.6 170 32.4
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 3.8e-11 72.8 150 30.7
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 4.9e-11 72.4 93 44.1
Ah.05g179030 Amaranthus hybridus HOM05D008433 ORTHO05D009918 8.4e-11 71.6 132 35.6
FAN03G0231 Fragaria x ananassa HOM05D013717 ORTHO05D009918 1.4e-10 70.9 184 34.8
Nn1g00412 Nelumbo nucifera HOM05D033573 ORTHO05D009918 1.4e-10 70.9 135 40.7
CDE06G1173 Ceratophyllum demersum HOM05D051512 ORTHO05D009918 2.5e-10 70.1 149 36.2
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 2.5e-10 70.1 111 38.7
Actinidia28092 Actinidia chinensis HOM05D013717 ORTHO05D009918 5.5e-10 68.9 167 34.1
FAN10G3359 Fragaria x ananassa HOM05D013717 ORTHO05D009918 1.6e-09 67.4 183 35.0
BcaB06g29468 Brassica carinata HOM05D008433 ORTHO05D009918 4.6e-09 65.9 143 35.0
FAN01G0488 Fragaria x ananassa HOM05D013717 ORTHO05D009918 6.0e-09 65.5 183 33.3
FAN10G3789 Fragaria x ananassa HOM05D013717 ORTHO05D009918 7.9e-09 65.1 183 34.4
TPR.G22611 Trifolium pratense HOM05D008433 ORTHO05D009918 7.9e-09 65.1 116 37.1
Nitab4.5_0003094g0050 Nicotiana tabacum HOM05D018587 ORTHO05D009918 1.0e-08 64.7 147 35.4
RcHm_v2.0_Chr1g0360901 Rosa chinensis HOM05D013717 ORTHO05D009918 1.0e-08 64.7 82 41.5
BcaC02g07009 Brassica carinata HOM05D008433 ORTHO05D009918 1.8e-08 63.9 142 34.5
FAN06G2608 Fragaria x ananassa HOM05D013717 ORTHO05D009918 2.3e-08 63.5 178 31.5
Nitab4.5_0002053g0010 Nicotiana tabacum HOM05D018587 ORTHO05D009918 2.3e-08 63.5 131 37.4
Rhsim01G0179000 Rhododendron simsii HOM05D008433 ORTHO05D009918 3.0e-08 63.2 195 34.4
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 3.9e-08 62.8 136 31.6
Manes.05G017500 Manihot esculenta HOM05D008433 ORTHO05D009918 5.1e-08 62.4 139 35.3
Ciclev10023317m.g Citrus clementina HOM05D008433 ORTHO05D009918 1.1e-07 61.2 133 44.4
Oeu015062.1 Olea europaea HOM05D008433 ORTHO05D009918 1.1e-07 61.2 108 38.9
TWI14G1180 Tripterygium wilfordii HOM05D008433 ORTHO05D009918 1.1e-07 61.2 126 35.7
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 1.5e-07 60.8 177 32.8
MSTRG.20921 Avicennia marina HOM05D008433 ORTHO05D009918 1.9e-07 60.5 159 32.1
Aa31LG1G28120 Aethionema arabicum HOM05D008433 ORTHO05D009918 2.5e-07 60.1 94 39.4
CANSAT56G3323 Cannabis sativa HOM05D013717 ORTHO05D009918 5.7e-07 58.9 146 31.5
BcaNung03892 Brassica carinata HOM05D008433 ORTHO05D009918 7.4e-07 58.5 143 32.2
Sabra02G0135500 Salix brachista HOM05D008433 ORTHO05D009918 7.4e-07 58.5 94 38.3
Glyma.19G259100 Glycine max HOM05D008433 ORTHO05D009918 9.6e-07 58.2 80 48.8
PGR031G3198 Punica granatum HOM05D008433 ORTHO05D009918 9.6e-07 58.2 72 40.3
Potri.002G178100 Populus trichocarpa HOM05D008433 ORTHO05D009918 1.3e-06 57.8 108 33.3
Psat3g000840 Pisum sativum HOM05D008433 ORTHO05D009918 1.6e-06 57.4 79 53.2
Gohir.A11G100200 Gossypium hirsutum HOM05D008433 ORTHO05D009918 2.1e-06 57.0 104 34.6
Gohir.D11G104900 Gossypium hirsutum HOM05D008433 ORTHO05D009918 2.1e-06 57.0 104 34.6
Gorai.007G112200 Gossypium raimondii HOM05D008433 ORTHO05D009918 2.1e-06 57.0 104 34.6
Oeu046652.1 Olea europaea HOM05D008433 ORTHO05D009918 2.1e-06 57.0 142 33.1
VMungo1309G0842 Vigna mungo HOM05D008433 ORTHO05D009918 2.8e-06 56.6 81 43.2
Thhalv10001667m.g Eutrema salsugineum HOM05D008433 ORTHO05D009918 4.8e-06 55.8 100 37.0
Peaxi162Scf00087g00044 Petunia axillaris HOM05D018587 ORTHO05D009918 4.8e-06 55.8 79 43.0
CDE04G3055 Ceratophyllum demersum HOM05D051512 ORTHO05D009918 6.3e-06 55.5 91 39.6
Phvul.009G257200 Phaseolus vulgaris HOM05D008433 ORTHO05D009918 8.2e-06 55.1 75 37.3


User provided reference genes

Program Settings