Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1350 Trochodendron aralioides HOM05D000098 ORTHO05D000546 1.6e-46 189.1 98 100.0
TAR636G2686 Trochodendron aralioides HOM05D000098 ORTHO05D000546 5.5e-31 137.5 100 76.0
QL02p031574 Quercus lobata HOM05D000098 ORTHO05D000546 4.1e-18 94.7 95 54.7
GSVIVG01019486001 Vitis vinifera HOM05D000098 ORTHO05D000546 1.2e-17 93.2 98 54.1
MD06G1100600 Malus domestica HOM05D000098 ORTHO05D000546 1.3e-16 89.7 100 53.0
Haze_08684 Corylus avellana HOM05D000098 ORTHO05D000546 1.9e-15 85.9 48 75.0
Hma1.2p1_0359F.1_g135440 Hydrangea macrophylla HOM05D000098 ORTHO05D000546 1.6e-14 82.8 97 48.5
MD14G1120500 Malus domestica HOM05D000098 ORTHO05D000546 2.1e-14 82.4 100 49.0
PSO063G5724 Papaver somniferum HOM05D000098 ORTHO05D000546 1.8e-13 79.3 94 50.0
PSO170G3903 Papaver somniferum HOM05D000098 ORTHO05D000546 2.3e-13 79.0 94 48.9
Nn1g01794 Nelumbo nucifera HOM05D000098 ORTHO05D000546 3.0e-13 78.6 45 75.6
CiPaw.12G085500 Carya illinoinensis HOM05D000332 ORTHO05D000546 4.0e-13 78.2 101 46.5
Prupe.5G114200 Prunus persica HOM05D000098 ORTHO05D000546 1.2e-12 76.6 109 42.2
Sed0026020 Sechium edule HOM05D000098 ORTHO05D000546 6.3e-11 70.9 104 42.3
MELO3C016312.2 Cucumis melo HOM05D000098 ORTHO05D000546 3.5e-09 65.1 50 54.0
CsaV3_4G006380 Cucumis sativus L. HOM05D000098 ORTHO05D000546 3.5e-09 65.1 50 54.0
ClCG07G014850 Citrullus lanatus HOM05D000098 ORTHO05D000546 2.2e-08 62.4 86 44.2
vmacro22740 Vaccinium macrocarpon HOM05D000098 ORTHO05D000546 2.2e-08 62.4 99 43.4
Eucgr.D01774 Eucalyptus grandis HOM05D000098 ORTHO05D000546 3.8e-08 61.6 45 62.2
MBI06_g22404_MAGBIO Magnolia biondii HOM05D000098 ORTHO05D000546 6.5e-08 60.8 42 59.5
Zm00001eb245440 Zea mays HOM05D000098 ORTHO05D000546 6.5e-08 60.8 36 66.7
Dinv38865 Davidia involucrata HOM05D000098 ORTHO05D000546 8.5e-08 60.5 42 54.8
CANSAT21G0211 Cannabis sativa HOM05D000098 ORTHO05D000546 1.1e-07 60.1 94 39.4
EL10Ac5g12874 Beta vulgaris HOM05D000332 ORTHO05D000546 1.5e-07 59.7 78 37.2
Os05g0570900 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D000546 1.9e-07 59.3 51 51.0
QL09p011024 Quercus lobata HOM05D000098 ORTHO05D000546 1.9e-07 59.3 97 39.2
RcHm_v2.0_Chr7g0195571 Rosa chinensis HOM05D000098 ORTHO05D000546 4.2e-07 58.2 107 36.4
Ah.07g197110 Amaranthus hybridus HOM05D000098 ORTHO05D000546 7.2e-07 57.4 44 50.0
TWI81G0145 Tripterygium wilfordii HOM05D000098 ORTHO05D000546 1.2e-06 56.6 39 56.4
CSS0009719 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000546 1.6e-06 56.2 42 57.1
CSS0010279 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000546 1.6e-06 56.2 42 57.1
CSS0011914 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000546 1.6e-06 56.2 44 56.8
PGR031G3269 Punica granatum HOM05D000332 ORTHO05D000546 2.7e-06 55.5 97 33.0
Actinidia15771 Actinidia chinensis HOM05D000098 ORTHO05D000546 3.6e-06 55.1 44 52.3
HPP92_007624 Vanilla planifolia HOM05D000098 ORTHO05D000546 3.6e-06 55.1 62 48.4
CiPaw.05G258200 Carya illinoinensis HOM05D000098 ORTHO05D000546 4.7e-06 54.7 96 38.5
AUR62010801 Chenopodium quinoa HOM05D000098 ORTHO05D000546 4.7e-06 54.7 97 36.1
Actinidia01748 Actinidia chinensis HOM05D000098 ORTHO05D000546 6.1e-06 54.3 44 52.3
FAN08G2724 Fragaria x ananassa HOM05D000098 ORTHO05D000546 6.1e-06 54.3 117 34.2
Haze_16552 Corylus avellana HOM05D000098 ORTHO05D000546 8.0e-06 53.9 53 45.3


User provided reference genes

Program Settings