Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 4.2e-125 451.4 241 100.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.7e-94 349.7 200 87.0
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.7e-94 349.7 199 86.4
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 5.0e-94 348.2 198 86.4
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 6.6e-94 347.8 203 86.2
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 1.9e-93 346.3 200 86.0
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.3e-93 345.5 196 86.7
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 9.5e-93 344.0 199 85.4
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.2e-92 343.6 196 84.7
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.6e-92 343.2 199 84.9
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.6e-92 343.2 193 88.6
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 3.6e-92 342.0 199 83.4
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.2e-92 341.3 196 83.7
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 6.2e-92 341.3 197 84.8
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.4e-91 340.1 198 83.8
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 1.4e-91 340.1 197 84.3
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.1e-91 339.0 200 84.0
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.1e-91 339.0 200 84.0
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 3.1e-91 339.0 196 82.7
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 3.1e-91 339.0 198 83.3
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 3.1e-91 339.0 197 84.8
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 5.2e-91 338.2 200 83.0
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 5.2e-91 338.2 198 84.3
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 6.8e-91 337.8 197 82.7
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 6.8e-91 337.8 199 84.9
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 6.8e-91 337.8 200 82.0
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 6.8e-91 337.8 194 85.6
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 3.4e-90 335.5 197 83.8
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 3.4e-90 335.5 199 81.4
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 3.4e-90 335.5 199 81.4
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 4.4e-90 335.1 196 82.7
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 7.5e-90 334.3 199 82.9
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 9.8e-90 334.0 196 82.1
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 9.8e-90 334.0 196 82.1
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.7e-89 333.2 199 81.9
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 2.2e-89 332.8 208 80.3
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.9e-89 332.4 188 87.8
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 3.7e-89 332.0 199 82.4
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 8.3e-89 330.9 204 80.9
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.1e-88 330.5 194 82.5
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.4e-88 330.1 204 82.4
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 2.4e-88 329.3 204 80.4
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 7.1e-88 327.8 188 85.6
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 9.2e-88 327.4 200 80.0
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.6e-87 326.6 204 79.9
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 3.5e-87 325.5 198 81.8
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 4.6e-87 325.1 207 79.7
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 6.0e-87 324.7 189 87.3
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.0e-87 324.7 204 79.4
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 1.0e-86 323.9 201 79.1
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.3e-86 323.6 210 77.6
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.3e-86 323.6 210 77.6
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.7e-86 323.2 204 82.4
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 2.3e-86 322.8 209 76.1
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 1.5e-85 320.1 205 77.1
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.9e-85 319.7 211 77.3
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 2.5e-85 319.3 188 83.0
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 5.6e-85 318.2 194 80.4
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 7.3e-85 317.8 198 80.8
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 1.2e-84 317.0 198 79.3
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 4.7e-84 315.1 211 76.8
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.2e-84 314.7 211 76.3
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.8e-83 313.2 198 79.3
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 8.9e-83 310.8 205 78.0
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 7.6e-82 307.8 208 76.0
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.6e-82 307.8 208 76.0
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.9e-80 303.1 199 71.9
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.9e-80 303.1 196 75.5
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.1e-80 302.0 199 72.9
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 5.4e-80 301.6 193 80.3
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 5.4e-80 301.6 193 80.3
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 4.6e-79 298.5 216 72.2
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 5.6e-77 291.6 196 75.0
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.1e-75 287.3 215 70.7
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 3.1e-75 285.8 215 70.7
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 5.8e-74 281.6 203 69.0
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 8.4e-73 277.7 201 70.6
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.6e-71 273.5 204 67.2
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.6e-71 271.9 193 75.1
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 6.0e-71 271.6 204 65.7
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 7.8e-71 271.2 203 69.0
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 3.0e-70 269.2 203 65.5
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 5.8e-66 255.0 194 68.0
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 4.9e-65 251.9 142 85.9
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 1.3e-62 243.8 213 62.0
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 3.0e-62 242.7 139 85.6
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.1e-61 240.7 191 64.9
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 8.1e-60 234.6 152 73.0
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 7.6e-58 228.0 163 70.6
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 7.4e-53 211.5 188 64.4
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.2e-49 199.9 186 51.6
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.5e-45 186.4 188 51.6
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 5.7e-45 185.3 103 86.4
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 1.5e-42 177.2 208 49.0
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 3.4e-26 122.9 78 74.4
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.1e-19 101.3 121 52.1
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.9e-16 90.5 195 31.8
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 7.7e-10 68.6 57 57.9


User provided reference genes

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