Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 3.2e-210 734.9 399 100.0
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.1e-125 454.1 356 68.8
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.2e-119 434.1 399 59.6
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 2.4e-109 399.8 362 59.9
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 7.0e-109 398.3 367 60.2
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 3.0e-107 392.9 400 54.8
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 2.5e-106 389.8 409 54.8
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.2e-105 387.5 399 55.6
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 2.8e-105 386.3 402 54.7
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 6.2e-105 385.2 405 56.0
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 8.1e-105 384.8 400 59.0
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 5.2e-104 382.1 356 58.1
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.5e-103 380.6 354 59.0
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 2.0e-103 380.2 369 57.2
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 9.8e-103 377.9 404 56.2
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 4.1e-101 372.5 401 53.9
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 9.2e-101 371.3 364 57.1
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.2e-100 370.9 364 57.1
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.2e-100 370.9 401 54.1
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.1e-100 370.2 364 57.1
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 3.5e-100 369.4 408 55.6
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 6.0e-100 368.6 363 57.9
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 1.0e-99 367.9 458 48.3
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 3.0e-99 366.3 348 55.7
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 3.9e-99 365.9 404 52.7
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.5e-98 364.0 416 53.6
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 3.3e-98 362.8 356 55.6
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 3.6e-97 359.4 399 51.6
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 4.7e-97 359.0 346 57.8
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 4.4e-95 352.4 348 55.7
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 4.4e-95 352.4 420 51.0
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 1.7e-94 350.5 401 52.4
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.2e-94 350.1 359 53.8
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.7e-94 349.4 348 55.2
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.1e-93 347.8 339 54.9
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.9e-93 347.1 449 49.2
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.4e-93 346.7 348 55.2
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 9.2e-93 344.7 400 51.5
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 9.2e-93 344.7 359 55.7
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.2e-92 344.4 351 53.6
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 2.7e-92 343.2 353 54.1
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 2.3e-91 340.1 399 53.1
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 6.6e-91 338.6 347 53.6
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 8.6e-91 338.2 345 53.6
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 8.6e-91 338.2 399 52.9
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.5e-90 336.7 340 52.9
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.5e-90 336.7 340 52.9
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 3.3e-90 336.3 351 53.0
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 7.3e-90 335.1 402 50.7
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 2.8e-89 333.2 349 55.3
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 3.6e-89 332.8 398 49.7
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.4e-88 330.9 363 53.2
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 5.2e-88 328.9 348 52.0
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.4e-87 325.9 349 53.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 4.4e-87 325.9 402 52.0
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.3e-86 324.3 346 52.0
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.3e-86 324.3 360 52.2
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 8.4e-86 321.6 349 51.6
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 3.2e-85 319.7 353 52.1
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 4.6e-84 315.8 342 54.1
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 6.0e-84 315.5 347 53.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.0e-83 313.2 364 52.2
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 3.0e-83 313.2 394 48.2
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 1.5e-82 310.8 347 50.7
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 1.5e-82 310.8 401 46.9
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.9e-82 310.5 364 51.9
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 2.5e-82 310.1 374 48.4
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.3e-81 307.8 344 50.6
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 3.6e-81 306.2 346 52.9
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 2.4e-80 303.5 352 48.3
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 5.8e-79 298.9 363 48.2
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.4e-77 294.3 444 45.9
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 7.1e-77 292.0 345 48.4
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.2e-76 291.2 468 43.8
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 1.3e-73 281.2 315 50.8
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 1.6e-73 280.8 301 52.2
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 3.1e-72 276.6 396 47.2
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 3.1e-72 276.6 350 46.9
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 1.5e-71 274.2 368 46.2
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 2.0e-71 273.9 350 48.9
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 1.4e-69 267.7 301 52.8
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 1.9e-69 267.3 397 43.6
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 5.5e-69 265.8 345 45.5
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 7.1e-69 265.4 218 72.0
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.7e-68 263.5 327 48.9
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 1.0e-67 261.5 293 51.2
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.8e-67 260.8 304 52.6
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 2.3e-67 260.4 339 48.4
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 3.0e-67 260.0 306 49.3
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.1e-66 258.1 365 43.8
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 1.9e-66 257.3 348 47.1
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 3.3e-66 256.5 322 47.8
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.0e-64 249.6 356 44.1
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 1.0e-62 245.0 271 52.4
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 2.9e-62 243.4 414 40.6
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.9e-61 240.7 356 44.9
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 2.5e-61 240.4 351 40.5
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 5.5e-61 239.2 348 40.8
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 9.3e-61 238.4 371 42.6
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 9.3e-61 238.4 371 42.6
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 3.5e-60 236.5 267 50.6
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 3.5e-60 236.5 361 42.4
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 4.3e-58 229.6 369 43.9
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 7.4e-58 228.8 312 45.8
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 6.3e-57 225.7 355 44.2
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.8e-56 224.2 312 45.2
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 1.5e-55 221.1 304 47.7
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 5.5e-53 212.6 308 43.8
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 5.5e-53 212.6 308 43.8
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 5.5e-53 212.6 308 43.8
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 2.7e-52 210.3 383 39.4
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 4.3e-50 203.0 264 45.8
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.3e-49 201.4 308 42.2
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.3e-49 201.4 308 42.2
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 2.6e-47 193.7 432 36.3
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.8e-32 144.4 348 35.9
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 5.2e-27 126.3 156 47.4
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 5.5e-21 106.3 227 33.5
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 2.3e-19 100.9 353 26.9
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 3.0e-19 100.5 341 28.4
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 4.0e-19 100.1 336 28.3
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 4.4e-18 96.7 72 72.2
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 9.1e-16 89.0 70 60.0
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 1.0e-14 85.5 56 69.6
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 2.7e-12 77.4 97 45.4
Nn1g00689 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.3e-06 58.5 54 57.4


User provided reference genes

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