Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.5e-98 362.8 178 100.0
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 7.1e-45 184.5 127 70.9
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 3.5e-44 182.2 127 69.3
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 6.0e-44 181.4 127 70.1
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 6.7e-43 177.9 127 70.1
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 6.7e-43 177.9 127 69.3
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 8.7e-43 177.6 127 67.7
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 1.1e-42 177.2 119 72.3
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 1.5e-42 176.8 114 73.7
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.5e-42 176.8 127 69.3
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 9.6e-42 174.1 127 68.5
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 1.3e-41 173.7 127 67.7
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.3e-41 173.7 119 70.6
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 3.7e-41 172.2 111 73.9
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 6.2e-41 171.4 127 63.8
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 6.2e-41 171.4 119 69.7
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 6.2e-41 171.4 119 69.7
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 8.2e-41 171.0 127 65.4
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 1.1e-40 170.6 119 68.1
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 1.1e-40 170.6 119 70.6
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 1.1e-40 170.6 110 72.7
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.4e-40 170.2 127 66.1
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 1.8e-40 169.9 127 67.7
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.4e-40 169.5 127 66.1
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 3.1e-40 169.1 127 66.9
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 4.0e-40 168.7 127 64.6
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 4.0e-40 168.7 127 65.4
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 4.0e-40 168.7 127 65.4
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 5.3e-40 168.3 127 65.4
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 5.3e-40 168.3 119 68.1
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 6.9e-40 167.9 127 64.6
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 9.0e-40 167.5 127 63.8
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 1.2e-39 167.2 119 69.7
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 2.0e-39 166.4 119 65.5
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 2.0e-39 166.4 155 56.8
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.6e-39 166.0 126 65.9
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 3.4e-39 165.6 119 68.1
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 4.5e-39 165.2 127 62.2
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 7.6e-39 164.5 127 65.4
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 7.6e-39 164.5 119 68.9
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 7.6e-39 164.5 111 70.3
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 1.0e-38 164.1 127 63.8
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 1.3e-38 163.7 127 62.2
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 1.3e-38 163.7 127 62.2
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 1.7e-38 163.3 122 66.4
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 1.7e-38 163.3 127 64.6
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 2.2e-38 162.9 127 64.6
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.2e-38 162.9 127 64.6
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 2.2e-38 162.9 127 63.0
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 2.9e-38 162.5 122 68.0
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 2.9e-38 162.5 122 65.6
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 2.9e-38 162.5 120 64.2
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 6.5e-38 161.4 127 63.8
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 6.5e-38 161.4 127 61.4
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 6.5e-38 161.4 127 64.6
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 1.1e-37 160.6 123 64.2
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 1.1e-37 160.6 119 63.9
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 1.4e-37 160.2 110 68.2
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 1.4e-37 160.2 119 63.0
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 1.4e-37 160.2 141 58.2
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 1.9e-37 159.8 119 63.0
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 1.9e-37 159.8 127 59.8
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.9e-37 159.8 127 63.8
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 2.5e-37 159.5 122 64.8
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 3.2e-37 159.1 122 64.8
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 3.2e-37 159.1 119 65.5
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 3.2e-37 159.1 111 70.3
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 4.2e-37 158.7 119 65.5
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 4.2e-37 158.7 119 63.0
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 4.2e-37 158.7 112 66.1
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 5.5e-37 158.3 122 64.8
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 5.5e-37 158.3 119 65.5
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 5.5e-37 158.3 120 67.5
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 5.5e-37 158.3 127 61.4
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 7.1e-37 157.9 122 63.9
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 7.1e-37 157.9 127 62.2
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 9.3e-37 157.5 127 60.6
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 1.6e-36 156.8 111 65.8
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 1.6e-36 156.8 127 63.0
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 1.6e-36 156.8 122 63.9
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 2.7e-36 156.0 127 60.6
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 3.5e-36 155.6 119 64.7
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 3.5e-36 155.6 117 65.0
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 3.5e-36 155.6 119 62.2
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 1.0e-35 154.1 127 57.5
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.3e-35 153.7 122 63.1
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 2.3e-35 152.9 132 60.6
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.1e-35 151.8 130 59.2
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 1.1e-34 150.6 119 59.7
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 2.5e-34 149.4 151 53.0
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 7.4e-34 147.9 119 59.7
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 9.7e-34 147.5 121 62.0
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 2.2e-33 146.4 128 59.4
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 3.7e-33 145.6 119 58.8
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 5.3e-32 141.7 128 58.6
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 1.2e-31 140.6 107 65.4
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 3.4e-31 139.0 127 56.7
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 2.5e-29 132.9 75 80.0
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 7.2e-29 131.3 121 55.4
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 9.3e-29 131.0 148 49.3
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.6e-28 130.2 121 55.4
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 1.6e-28 130.2 111 55.0
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 1.0e-27 127.5 76 73.7
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 6.7e-27 124.8 119 52.9
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 1.5e-26 123.6 125 52.8
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 3.3e-26 122.5 76 72.4
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 5.7e-26 121.7 120 51.7
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 7.4e-26 121.3 119 48.7
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 3.7e-25 119.0 75 74.7
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 1.1e-24 117.5 70 72.9
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 1.4e-24 117.1 75 68.0
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 2.4e-24 116.3 119 48.7
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 1.2e-23 114.0 130 48.5
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 2.9e-22 109.4 102 55.9
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 2.9e-22 109.4 102 55.9
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 1.9e-21 106.7 74 67.6
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 4.2e-21 105.5 102 51.0
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 1.8e-19 100.1 64 78.1
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 7.4e-18 94.7 75 56.0
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 1.1e-16 90.9 75 54.7
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 5.3e-16 88.6 73 64.4
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 3.4e-15 85.9 124 44.4
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 2.7e-12 76.3 120 39.2
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 3.0e-11 72.8 65 60.0
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 5.2e-11 72.0 92 44.6
TAR511G0003 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.1e-10 70.9 65 56.9
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 6.3e-09 65.1 146 30.8
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 5.3e-08 62.0 158 28.5


User provided reference genes

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