Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 2.7e-166 588.6 298 100.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 3.0e-149 531.9 301 89.0
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 7.5e-148 527.3 305 86.9
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.4e-146 522.3 299 87.3
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 5.4e-146 521.2 298 86.6
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.2e-145 520.0 300 87.3
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.3e-144 515.8 306 85.3
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.0e-144 515.4 308 85.7
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 8.6e-144 513.8 310 84.2
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 8.6e-144 513.8 305 85.6
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 5.6e-143 511.1 298 87.6
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 9.5e-143 510.4 306 83.7
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 2.8e-142 508.8 304 84.2
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 4.7e-142 508.1 295 87.5
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 8.0e-142 507.3 296 87.2
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 1.0e-141 506.9 297 87.5
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.0e-141 506.9 297 86.9
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.3e-141 505.8 305 85.2
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 5.2e-141 504.6 295 86.1
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 1.2e-140 503.4 298 86.2
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 1.5e-140 503.1 295 85.4
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.0e-140 502.7 303 83.8
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 2.0e-140 502.7 302 84.8
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 2.6e-140 502.3 296 85.5
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 3.4e-140 501.9 297 86.5
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 4.4e-140 501.5 295 85.4
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 4.4e-140 501.5 298 85.6
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 5.8e-140 501.1 295 84.1
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 5.8e-140 501.1 289 86.5
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 5.8e-140 501.1 304 83.9
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 7.5e-140 500.7 298 83.9
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 7.5e-140 500.7 298 85.9
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 9.8e-140 500.4 299 83.6
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 9.8e-140 500.4 296 85.1
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 1.3e-139 500.0 298 85.6
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 1.3e-139 500.0 296 85.1
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 2.2e-139 499.2 295 85.1
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 2.2e-139 499.2 298 84.6
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 3.7e-139 498.4 297 86.5
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 4.9e-139 498.0 287 86.4
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 4.9e-139 498.0 309 83.2
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 6.4e-139 497.7 287 86.1
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 6.4e-139 497.7 287 86.1
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 6.4e-139 497.7 287 86.1
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 6.4e-139 497.7 299 86.0
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 8.3e-139 497.3 301 84.4
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.1e-138 496.9 301 85.0
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.4e-138 496.5 295 85.1
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 1.9e-138 496.1 291 84.5
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.9e-138 496.1 295 84.4
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 1.9e-138 496.1 308 84.1
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 2.4e-138 495.7 298 82.9
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 2.4e-138 495.7 288 85.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.2e-138 495.4 282 87.9
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 5.4e-138 494.6 303 84.2
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 9.2e-138 493.8 281 88.3
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.6e-137 493.0 296 83.4
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 1.6e-137 493.0 304 82.9
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.6e-137 493.0 302 84.4
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.6e-137 493.0 291 84.5
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 2.0e-137 492.7 297 82.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.0e-137 492.7 282 87.6
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 2.7e-137 492.3 291 86.6
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.5e-137 491.9 296 83.8
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 3.5e-137 491.9 290 85.2
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 3.5e-137 491.9 303 83.8
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.6e-137 491.5 296 84.8
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 6.0e-137 491.1 299 83.6
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.0e-136 490.3 299 83.6
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.0e-136 490.3 299 82.9
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.0e-136 490.3 304 82.2
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 2.3e-136 489.2 304 82.2
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 3.0e-136 488.8 289 85.5
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.9e-136 488.4 291 84.9
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 3.9e-136 488.4 300 83.7
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 5.0e-136 488.0 290 84.8
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 6.6e-136 487.6 295 84.4
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.1e-135 486.9 283 85.9
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.1e-135 486.9 308 81.2
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.9e-135 486.1 300 82.7
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.9e-135 486.1 286 85.3
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 4.3e-135 485.0 298 82.9
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 4.3e-135 485.0 289 84.8
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.6e-135 484.6 286 85.0
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 7.3e-135 484.2 280 85.4
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 7.3e-135 484.2 298 82.9
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 9.5e-135 483.8 289 83.7
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.2e-134 483.4 295 83.4
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.2e-134 483.4 296 82.4
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.6e-134 483.0 299 82.3
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.6e-134 483.0 298 83.2
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 2.8e-134 482.3 282 84.8
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 2.8e-134 482.3 281 84.0
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 4.7e-134 481.5 289 83.7
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 8.1e-134 480.7 284 85.2
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.8e-133 479.6 291 83.5
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.8e-133 479.6 279 84.9
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 5.2e-133 478.0 302 82.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 6.8e-133 477.6 294 82.3
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 8.9e-133 477.2 266 89.5
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 1.5e-132 476.5 293 81.6
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.5e-132 476.5 297 81.5
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 9.8e-132 473.8 297 82.8
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 8.3e-131 470.7 291 79.7
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.9e-130 469.5 284 84.2
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 5.4e-130 468.0 287 82.6
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 9.2e-130 467.2 304 78.3
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 3.5e-129 465.3 300 78.7
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 3.0e-128 462.2 313 78.6
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.1e-127 460.3 291 80.1
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.5e-127 459.9 326 74.2
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.9e-127 459.5 272 85.3
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 9.5e-127 457.2 291 80.1
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 9.5e-127 457.2 288 82.3
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 8.1e-126 454.1 296 78.4
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 4.0e-125 451.8 273 83.5
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 1.5e-124 449.9 305 78.7
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 2.0e-124 449.5 389 65.3
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 5.8e-124 448.0 288 79.5
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.3e-123 446.8 291 76.3
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.3e-120 436.8 280 80.0
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 5.1e-120 434.9 260 83.5
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 4.7e-118 428.3 258 84.1
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.4e-117 426.0 287 76.7
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.4e-117 426.0 277 79.4
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 3.4e-116 422.2 221 93.2
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 2.9e-115 419.1 221 92.3
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.5e-111 406.8 218 90.8
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.5e-111 406.8 218 90.8
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.9e-111 406.4 290 70.0
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 4.0e-109 398.7 250 76.0
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 8.4e-107 391.0 273 70.0
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 5.4e-106 388.3 251 74.5
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.3e-106 387.5 307 69.1
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 3.0e-104 382.5 200 93.0
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 5.8e-100 368.2 252 69.0
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 7.6e-100 367.9 218 84.9
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 7.9e-97 357.8 215 84.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 4.9e-91 338.6 182 92.3
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.9e-90 336.7 208 81.7
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 3.2e-90 335.9 182 89.6
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 3.2e-82 309.3 174 87.9
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 9.3e-82 307.8 191 82.7
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 6.7e-80 301.6 221 74.7
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 6.1e-73 278.5 152 89.5
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.0e-67 258.8 194 67.5
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 7.4e-63 245.0 146 82.2
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 4.1e-61 239.2 209 64.1
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.5e-50 204.1 242 50.0
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 4.2e-50 202.6 119 79.0
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 8.8e-48 194.9 158 65.8
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 4.4e-47 192.6 136 74.3
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 5.0e-43 179.1 177 58.2
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 8.5e-43 178.3 105 80.0
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 4.9e-38 162.5 86 88.4
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 3.1e-37 159.8 96 78.1
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 4.4e-31 139.4 305 32.8
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.7e-30 137.5 83 80.7
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.0e-27 128.3 196 44.4
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 8.6e-27 125.2 170 43.5
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 4.3e-26 122.9 94 72.3
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 9.5e-26 121.7 66 89.4
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 9.5e-26 121.7 66 89.4
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 5.6e-18 95.9 158 41.8
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 2.8e-17 93.6 53 83.0
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-16 90.9 85 56.5
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 7.5e-15 85.5 79 57.0
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.1e-13 81.6 89 58.4
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.1e-13 81.6 89 58.4
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 1.1e-13 81.6 79 59.5
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 1.9e-13 80.9 96 51.0
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.0e-11 75.1 71 60.6
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 1.7e-11 74.3 107 43.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.5e-10 70.5 110 40.0
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 1.8e-08 64.3 57 54.4
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.2e-08 62.8 43 74.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 6.8e-08 62.4 42 76.2
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 8.9e-08 62.0 34 82.4
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 7.6e-07 58.9 61 59.0
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 9.9e-07 58.5 38 73.7
Solyc04g079010.1 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.9e-06 56.2 40 62.5


User provided reference genes

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