Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1224 Trochodendron aralioides HOM05D005590 ORTHO05D043575 1.9e-91 339.3 193 100.0
TAR629G0528 Trochodendron aralioides HOM05D005590 ORTHO05D007084 3.2e-30 136.0 84 81.0
Aqoxy5G03486 Aquilegia oxysepala HOM05D005590 ORTHO05D007084 7.0e-30 134.8 84 79.8
PSO782G2635 Papaver somniferum HOM05D005590 ORTHO05D007084 7.0e-30 134.8 84 79.8
PSO063G4664 Papaver somniferum HOM05D005590 ORTHO05D007084 2.0e-29 133.3 84 78.6
Zm00001eb118150 Zea mays HOM05D005590 ORTHO05D007084 1.5e-27 127.1 84 72.6
Nn4g22391 Nelumbo nucifera HOM05D005590 ORTHO05D007084 2.5e-27 126.3 84 75.0
FvH4_4g24160 Fragaria vesca HOM05D005590 ORTHO05D007084 8.0e-26 121.3 84 71.4
Gohir.D04G181700 Gossypium hirsutum HOM05D005590 ORTHO05D007084 1.0e-25 120.9 84 71.4
Gorai.012G175100 Gossypium raimondii HOM05D005590 ORTHO05D007084 1.0e-25 120.9 84 71.4
Peaxi162Scf00128g00942 Petunia axillaris HOM05D005590 ORTHO05D007084 1.0e-25 120.9 84 70.2
Ca_16478_v3 Cicer arietinum L. HOM05D005590 ORTHO05D007084 1.4e-25 120.6 84 70.2
Thecc.02G275300 Theobroma cacao HOM05D005590 ORTHO05D007084 1.4e-25 120.6 84 75.0
QL03p054580 Quercus lobata HOM05D005590 ORTHO05D007084 2.3e-25 119.8 83 69.9
Gohir.A04G138800 Gossypium hirsutum HOM05D005590 ORTHO05D007084 4.0e-25 119.0 84 70.2
Medtr3g085640 Medicago truncatula HOM05D005590 ORTHO05D007084 4.0e-25 119.0 81 71.6
Potri.008G177900 Populus trichocarpa HOM05D005590 ORTHO05D007084 4.0e-25 119.0 84 71.4
Eucgr.B03469 Eucalyptus grandis HOM05D005590 ORTHO05D007084 5.2e-25 118.6 84 69.0
SalBow2G1962 Salvia bowleyana HOM05D005590 ORTHO05D007084 1.5e-24 117.1 84 69.0
GSVIVG01010360001 Vitis vinifera HOM05D005590 ORTHO05D007084 1.5e-24 117.1 84 69.0
Hma1.2p1_1954F.1_g308890 Hydrangea macrophylla HOM05D005590 ORTHO05D007084 2.0e-24 116.7 84 67.9
vmacro16128 Vaccinium macrocarpon HOM05D005590 ORTHO05D007084 2.0e-24 116.7 84 69.0
Actinidia33250 Actinidia chinensis HOM05D005590 ORTHO05D007084 2.6e-24 116.3 84 70.2
CDE08G0401 Ceratophyllum demersum HOM05D005590 ORTHO05D007084 2.6e-24 116.3 84 66.7
AUR62005583 Chenopodium quinoa HOM05D005590 ORTHO05D007084 2.6e-24 116.3 84 66.7
FAN12G4158 Fragaria x ananassa HOM05D005590 ORTHO05D007084 2.6e-24 116.3 74 78.4
Ciclev10030703m.g Citrus clementina HOM05D005590 ORTHO05D007084 3.4e-24 115.9 84 67.9
Duzib248G1471 Durio zibethinus HOM05D005590 ORTHO05D007084 3.4e-24 115.9 84 70.2
RcHm_v2.0_Chr4g0430931 Rosa chinensis HOM05D005590 ORTHO05D007084 3.4e-24 115.9 84 67.9
CANSAT01G0321 Cannabis sativa HOM05D005590 ORTHO05D007084 4.4e-24 115.5 84 65.5
CSS0021341 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 5.8e-24 115.2 84 69.0
Dinv10985 Davidia involucrata HOM05D005590 ORTHO05D007084 5.8e-24 115.2 84 69.0
Migut.K00707 Erythranthe guttata HOM05D005590 ORTHO05D007084 5.8e-24 115.2 84 66.7
FAN07G0306 Fragaria x ananassa HOM05D005590 ORTHO05D007084 5.8e-24 115.2 73 78.1
AUR62024147 Chenopodium quinoa HOM05D005590 ORTHO05D007084 7.5e-24 114.8 84 66.7
Glyma.11G248700 Glycine max HOM05D005590 ORTHO05D007084 7.5e-24 114.8 84 66.7
Lj6C823G8 Lonicera japonica HOM05D005590 ORTHO05D007084 7.5e-24 114.8 73 76.7
TWI36G0819 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 7.5e-24 114.8 84 66.7
TWI36G1126 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 7.5e-24 114.8 84 66.7
MSTRG.7987 Avicennia marina HOM05D005590 ORTHO05D007084 1.3e-23 114.0 84 66.7
Cfa009321 Carpinus fangiana HOM05D005590 ORTHO05D007084 1.3e-23 114.0 69 79.7
Cfa009349 Carpinus fangiana HOM05D005590 ORTHO05D043575 1.3e-23 114.0 74 75.7
CiPaw.05G113900 Carya illinoinensis HOM05D005590 ORTHO05D007084 1.3e-23 114.0 84 65.5
MELO3C011884.2 Cucumis melo HOM05D005590 ORTHO05D007084 1.3e-23 114.0 84 66.7
Oeu019045.1 Olea europaea HOM05D005590 ORTHO05D007084 1.3e-23 114.0 84 66.7
Prupe.1G232300 Prunus persica HOM05D005590 ORTHO05D007084 1.3e-23 114.0 84 67.9
ATR0686G208 Amborella trichopoda HOM05D005590 ORTHO05D007084 1.7e-23 113.6 84 65.5
EL10Ac6g13455 Beta vulgaris HOM05D005590 ORTHO05D007084 1.7e-23 113.6 84 63.1
CSS0010322 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 1.7e-23 113.6 84 67.9
Phvul.001G260000 Phaseolus vulgaris HOM05D005590 ORTHO05D007084 1.7e-23 113.6 84 66.7
SGA_v2.0_scaffold9G04769 Striga asiatica HOM05D005590 ORTHO05D007084 1.7e-23 113.6 84 65.5
Manes.13G016500 Manihot esculenta HOM05D005590 ORTHO05D007084 2.2e-23 113.2 84 66.7
unitig_22.g6410 Utricularia gibba HOM05D005590 ORTHO05D007084 2.2e-23 113.2 84 66.7
Haze_12376 Corylus avellana HOM05D005590 ORTHO05D007084 2.9e-23 112.8 74 75.7
CsaV3_5G030450 Cucumis sativus L. HOM05D005590 ORTHO05D007084 2.9e-23 112.8 84 66.7
Rhsim12G0104500 Rhododendron simsii HOM05D005590 ORTHO05D007084 2.9e-23 112.8 81 71.6
Lj6g0026097 Lotus japonicus HOM05D005590 ORTHO05D007084 3.7e-23 112.5 85 67.1
TPR.G21797 Trifolium pratense HOM05D005590 ORTHO05D007084 3.7e-23 112.5 84 65.5
Ah.03g133910 Amaranthus hybridus HOM05D005590 ORTHO05D007084 4.9e-23 112.1 84 63.1
Nitab4.5_0003209g0020 Nicotiana tabacum HOM05D005590 ORTHO05D007084 4.9e-23 112.1 74 74.3
arahy.Tifrunner.gnm1.ann1.T6FRZY Arachis hypogaea HOM05D005590 ORTHO05D007084 6.4e-23 111.7 84 65.5
CAN.G1178.7 Capsicum annuum HOM05D005590 ORTHO05D007084 6.4e-23 111.7 84 65.5
Lalb_Chr19g0126761 Lupinus albus HOM05D005590 ORTHO05D007084 8.3e-23 111.3 84 65.5
DCAR_031184 Daucus carota HOM05D005590 ORTHO05D007084 1.4e-22 110.5 84 64.3
Nitab4.5_0000240g0180 Nicotiana tabacum HOM05D005590 ORTHO05D007084 1.4e-22 110.5 74 73.0
Solyc05g014970.3 Solanum lycopersicum HOM05D005590 ORTHO05D007084 1.9e-22 110.2 84 64.3
arahy.Tifrunner.gnm1.ann1.F3MU0V Arachis hypogaea HOM05D005590 ORTHO05D007084 2.4e-22 109.8 84 64.3
BcaB05g24294 Brassica carinata HOM05D005590 ORTHO05D007084 2.4e-22 109.8 84 64.3
VMungo1383G1779 Vigna mungo HOM05D005590 ORTHO05D007084 2.4e-22 109.8 84 64.3
ECA234G4696 Erigeron canadensis HOM05D005590 ORTHO05D003891 3.2e-22 109.4 84 65.5
Cpa.g.sc43.29 Carica papaya HOM05D005590 ORTHO05D007084 5.4e-22 108.6 84 63.1
Sopen05g010060 Solanum pennellii HOM05D005590 ORTHO05D007084 5.4e-22 108.6 84 63.1
Sed0016931 Sechium edule HOM05D005590 ORTHO05D007084 7.0e-22 108.2 84 64.3
AT1G67550 Arabidopsis thaliana HOM05D005590 ORTHO05D007084 9.2e-22 107.8 84 63.1
BcaC03g14846 Brassica carinata HOM05D005590 ORTHO05D007084 1.2e-21 107.5 84 63.1
Cc11_g16690 Coffea canephora HOM05D005590 ORTHO05D007084 1.2e-21 107.5 84 63.1
THA.LOC104807889 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 1.2e-21 107.5 84 61.9
THA.LOC104807890 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 1.2e-21 107.5 84 61.9
THA.LOC104808470 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 1.2e-21 107.5 84 61.9
Sp5g22560 Schrenkiella parvula HOM05D005590 ORTHO05D007084 2.0e-21 106.7 84 61.9
AL2G26220 Arabidopsis lyrata HOM05D005590 ORTHO05D007084 2.7e-21 106.3 84 63.1
Carub.0002s1389 Capsella rubella HOM05D005590 ORTHO05D007084 2.7e-21 106.3 84 63.1
Thhalv10018120m.g Eutrema salsugineum HOM05D005590 ORTHO05D007084 2.7e-21 106.3 84 61.9
Glyma.05G146000 Glycine max HOM05D005590 ORTHO05D007084 6.0e-21 105.1 81 64.2
COL.COLO4_12817 Corchorus olitorius HOM05D005590 ORTHO05D007084 7.8e-21 104.8 74 71.6
Lsat_1_v5_gn_4_2961 Lactuca sativa HOM05D005590 ORTHO05D007084 7.8e-21 104.8 74 70.3
MD13G1114900 Malus domestica HOM05D005590 ORTHO05D007084 1.0e-20 104.4 74 71.6
PGR102G0567 Punica granatum HOM05D005590 ORTHO05D007084 1.0e-20 104.4 84 61.9
A02p14320 Brassica napus HOM05D005590 ORTHO05D007084 2.3e-20 103.2 75 68.0
BolC2t08460H Brassica oleracea HOM05D005590 ORTHO05D007084 3.0e-20 102.8 75 68.0
BraA02t06492Z Brassica rapa HOM05D005590 ORTHO05D007084 3.0e-20 102.8 75 68.0
SEGI_40048 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 3.0e-20 102.8 84 59.5
CARHR060120 Cardamine hirsuta HOM05D005590 ORTHO05D007084 5.0e-20 102.1 84 60.7
MD13G1114500 Malus domestica HOM05D005590 ORTHO05D007084 6.6e-20 101.7 72 70.8
AagrBONN_evm.TU.Sc2ySwM_344.1264 Anthoceros agrestis HOM05D005590 ORTHO05D007084 7.3e-19 98.2 84 56.0
SMO117G0108 Selaginella moellendorffii HOM05D005590 ORTHO05D007084 2.8e-18 96.3 84 56.0
Hund25444 Selenicereus undatus HOM05D005590 ORTHO05D007084 2.8e-18 96.3 74 63.5
Pp3c24_5050 Physcomitrium patens HOM05D005590 ORTHO05D007084 6.2e-18 95.1 108 50.0
CBR_g46753 Chara braunii HOM05D005590 ORTHO05D007084 2.6e-16 89.7 85 52.9
Mapoly0026s0042 Marchantia polymorpha HOM05D005590 ORTHO05D007084 2.6e-16 89.7 81 51.9
TAR629G2861 Trochodendron aralioides HOM05D000069 ORTHO05D000060 4.4e-16 89.0 45 97.8
Sed0012865 Sechium edule HOM05D005590 ORTHO05D007084 6.4e-15 85.1 84 53.6
MCO04G019 Micromonas commoda HOM05D005590 ORTHO05D007084 3.2e-14 82.8 80 52.5
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 4.1e-14 82.4 76 52.6
Sabra08G0135700 Salix brachista HOM05D005590 ORTHO05D007084 2.1e-13 80.1 59 67.8
ClCG11G013850 Citrullus lanatus HOM05D005590 ORTHO05D007084 3.0e-12 76.3 53 69.8
Aa31sc48G50 Aethionema arabicum HOM05D005590 ORTHO05D007084 1.8e-09 67.0 54 61.1
SHI17942 Sapria himalayana HOM05D000084 ORTHO05D002602 5.2e-09 65.5 49 63.3


User provided reference genes

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