Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 0.0e+00 1278.8 704 100.0
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 5.5e-141 505.8 615 52.0
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 6.8e-131 472.2 775 43.7
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 3.2e-112 410.2 375 58.9
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 3.3e-109 400.2 387 55.0
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 7.3e-101 372.5 836 39.8
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 4.7e-100 369.8 709 37.4
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.4e-96 357.5 394 50.0
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.8e-92 344.0 450 44.9
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 2.8e-92 344.0 460 43.9
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 8.9e-91 339.0 567 39.7
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 2.2e-89 334.3 377 48.8
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 8.7e-86 322.4 734 34.3
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 2.5e-85 320.9 408 46.3
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 4.3e-85 320.1 463 42.3
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 4.8e-84 316.6 734 33.5
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 1.1e-83 315.5 413 44.8
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 1.5e-82 311.6 405 45.2
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.3e-81 308.5 422 44.5
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 1.3e-81 308.5 594 37.4
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.8e-81 307.0 393 46.6
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 4.9e-81 306.6 826 33.3
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 8.4e-81 305.8 735 33.3
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 1.1e-80 305.4 594 39.2
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 9.3e-80 302.4 576 35.6
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 3.5e-79 300.4 831 30.9
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 4.6e-79 300.1 365 47.7
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 1.3e-78 298.5 558 37.6
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 8.1e-76 289.3 728 32.7
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 1.1e-75 288.9 369 45.0
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.1e-75 287.3 372 45.2
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 7.6e-74 282.7 520 39.8
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.9e-72 278.1 509 37.7
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-72 277.7 370 42.4
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.2e-72 276.9 372 44.1
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.6e-71 275.0 408 40.9
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 2.1e-71 274.6 708 38.3
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 3.5e-71 273.9 685 36.8
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 2.5e-69 267.7 436 39.9
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 4.3e-69 266.9 404 42.8
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 4.8e-68 263.5 446 38.8
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.1e-67 262.3 441 38.3
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 1.5e-66 258.5 390 43.8
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.5e-66 256.9 370 40.3
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 5.8e-66 256.5 513 41.7
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 1.0e-65 255.8 394 40.6
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 1.0e-65 255.8 258 53.9
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.3e-65 255.4 528 34.7
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 4.9e-65 253.4 279 50.5
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.9e-65 253.4 370 40.3
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 4.9e-65 253.4 388 40.7
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.5e-65 253.1 357 43.4
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 2.3e-62 244.6 391 40.2
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 5.7e-61 240.0 418 38.8
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 2.1e-60 238.0 649 32.2
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 2.8e-60 237.7 473 35.9
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 2.0e-58 231.5 304 46.1
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 2.5e-56 224.6 283 46.6
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 4.2e-56 223.8 262 47.3
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 2.7e-55 221.1 269 46.5
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 2.5e-53 214.5 290 44.1
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 9.7e-53 212.6 537 31.7
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.2e-52 211.5 342 40.1
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 1.4e-51 208.8 461 33.8
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 6.9e-51 206.5 285 43.2
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 5.9e-50 203.4 282 43.3
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 7.7e-50 203.0 480 32.7
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.6e-47 193.7 262 41.6
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 4.1e-43 180.6 209 46.4
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 2.6e-42 177.9 241 45.6
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 1.0e-41 176.0 424 29.5
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.4e-40 172.2 258 39.1
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-39 169.1 383 32.9
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 1.0e-38 166.0 191 47.1
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 1.8e-38 165.2 395 32.9
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.1e-37 162.5 243 39.1
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 1.1e-37 162.5 242 38.4
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 9.7e-37 159.5 227 40.5
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.7e-37 159.5 195 45.1
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 7.0e-35 153.3 132 56.8
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 1.7e-33 148.7 283 35.0
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 4.7e-31 140.6 273 37.4
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 5.2e-30 137.1 123 59.3
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 2.6e-29 134.8 246 37.4
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.5e-26 124.4 135 48.1
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.0e-25 122.9 218 34.4
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.8e-25 120.9 136 47.1
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.5e-25 120.2 113 53.1
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.5e-24 118.2 95 63.2
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.2e-24 117.9 136 45.6
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.2e-24 117.9 136 45.6
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.2e-24 117.5 105 55.2
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.6e-23 114.4 136 44.9
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.0e-22 112.8 70 75.7
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 5.7e-21 107.1 84 65.5
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 1.3e-20 105.9 117 47.9
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.2e-20 105.1 235 34.9
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.8e-20 104.8 133 42.9
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 3.7e-20 104.4 98 52.0
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 3.1e-19 101.3 200 35.0
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.1e-19 100.9 72 65.3
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 5.4e-19 100.5 84 59.5
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 9.1e-19 99.8 97 55.7
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 4.5e-18 97.4 97 54.6
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 6.5e-17 93.6 95 54.7
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 1.1e-16 92.8 134 43.3
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 2.5e-16 91.7 81 53.1
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.5e-16 91.7 100 49.0
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.2e-15 89.4 119 42.9
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 4.7e-15 87.4 75 54.7
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 4.7e-15 87.4 75 54.7
GSVIVG01019596001 Vitis vinifera HOM05D005777 ORTHO05D006854 4.7e-15 87.4 202 33.7
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 5.2e-14 84.0 70 57.1
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 5.2e-14 84.0 75 53.3
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 1.2e-13 82.8 70 58.6
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.5e-13 82.4 106 40.6
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-12 79.3 77 53.2
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 1.3e-12 79.3 75 50.7
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-12 77.8 75 49.3
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.6e-10 72.4 196 30.6
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 2.0e-10 72.0 65 53.8
HanXRQChr03g0083731 Helianthus annuus HOM05D005777 ORTHO05D006854 4.5e-10 70.9 97 41.2
PSO063G3570 Papaver somniferum HOM05D005777 ORTHO05D006854 1.3e-09 69.3 279 32.3
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 5.0e-09 67.4 113 39.8
Aqoxy5G04313 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 6.6e-09 67.0 286 32.9
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 1.2e-07 62.8 89 41.6
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.8e-07 61.6 35 77.1
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 6.8e-06 57.0 72 43.1


User provided reference genes

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