Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 6.2e-204 714.1 425 100.0
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 5.9e-146 521.5 315 82.5
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.7e-145 520.0 318 83.3
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.6e-143 513.5 314 83.1
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 3.0e-142 509.2 362 72.1
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 8.8e-142 507.7 315 79.4
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 1.5e-141 506.9 316 79.1
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 5.7e-141 505.0 346 74.9
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 9.7e-141 504.2 311 79.7
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.2e-140 503.1 315 79.7
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 6.3e-140 501.5 356 75.8
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.4e-139 500.4 312 79.5
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 5.3e-139 498.4 351 73.2
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 5.9e-138 495.0 319 77.1
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.3e-137 493.8 319 76.8
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.7e-137 493.4 319 77.1
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 2.2e-137 493.0 321 76.9
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 8.5e-137 491.1 317 75.1
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.1e-136 490.7 308 79.9
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.4e-136 490.3 355 70.4
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 4.2e-136 488.8 318 78.0
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 4.2e-136 488.8 314 78.0
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 5.5e-136 488.4 330 73.9
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 5.5e-136 488.4 318 79.2
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 2.7e-135 486.1 317 76.7
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 1.0e-134 484.2 350 71.1
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 2.3e-134 483.0 314 77.4
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 3.9e-134 482.3 326 76.4
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 5.2e-134 481.9 318 75.5
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 5.2e-134 481.9 318 75.5
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 6.7e-134 481.5 315 77.5
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 1.1e-133 480.7 308 79.5
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.1e-133 480.7 354 72.6
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 1.5e-133 480.3 314 77.1
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 2.0e-133 479.9 321 76.9
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.0e-133 479.9 318 75.2
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 3.3e-133 479.2 319 76.5
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 3.3e-133 479.2 351 69.5
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 4.4e-133 478.8 313 78.0
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 5.7e-133 478.4 311 75.6
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 9.7e-133 477.6 315 77.1
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 9.7e-133 477.6 328 76.5
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 9.7e-133 477.6 386 65.8
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 1.3e-132 477.2 336 73.8
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 1.3e-132 477.2 316 79.1
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.7e-132 476.9 319 76.5
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 2.8e-132 476.1 313 77.3
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 2.8e-132 476.1 312 77.6
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.8e-132 475.3 314 77.4
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 6.3e-132 474.9 314 77.1
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 5.3e-131 471.9 344 70.3
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 5.3e-131 471.9 312 76.3
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 9.1e-131 471.1 316 75.3
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.2e-130 470.7 312 76.0
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 7.7e-130 468.0 308 77.9
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.0e-129 467.6 348 70.4
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 8.5e-129 464.5 356 68.5
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.1e-128 464.2 355 70.4
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.1e-128 464.2 316 73.4
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.5e-128 463.8 318 77.0
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 3.2e-128 462.6 316 77.8
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.6e-127 460.3 316 73.7
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.7e-127 459.5 321 73.8
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 4.7e-127 458.8 317 71.9
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 4.7e-127 458.8 318 71.1
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 1.8e-126 456.8 335 71.9
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 2.3e-126 456.4 314 71.0
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 2.3e-126 456.4 314 71.0
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 3.0e-126 456.1 356 68.8
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 5.2e-126 455.3 314 71.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 5.2e-126 455.3 308 74.7
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.2e-125 454.1 313 71.6
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 5.7e-125 451.8 314 70.7
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 7.5e-125 451.4 309 73.8
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 2.2e-124 449.9 318 70.8
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.2e-124 449.9 345 71.9
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 4.8e-124 448.7 316 70.9
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.1e-123 447.6 320 70.3
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 1.4e-123 447.2 332 68.1
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.1e-123 445.7 334 72.8
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 9.1e-123 444.5 320 70.9
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 1.2e-122 444.1 316 70.9
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 1.7e-121 440.3 392 61.0
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.2e-117 427.6 315 67.9
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 2.6e-117 426.4 316 68.4
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 1.3e-116 424.1 322 67.7
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 8.3e-108 394.8 556 44.8
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 2.0e-106 390.2 302 64.9
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 2.8e-103 379.8 299 63.9
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 6.1e-103 378.6 260 73.8
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.0e-102 377.9 308 61.4
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 1.4e-102 377.5 262 70.6
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.1e-96 357.8 280 67.9
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 5.6e-96 355.5 230 78.3
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 9.5e-88 328.2 290 58.6
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 2.1e-87 327.0 261 68.2
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.1e-86 323.2 224 71.9
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 4.0e-70 269.6 191 72.8
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 6.9e-70 268.9 311 52.4
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.8e-63 246.9 185 69.7
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 3.5e-58 229.9 141 78.0
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 2.1e-50 204.1 154 63.6
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.3e-49 201.4 180 59.4
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 3.0e-41 173.7 262 38.2
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.3e-31 141.7 193 48.7
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.2e-27 127.1 69 84.1
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 4.7e-26 123.2 120 62.5
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 5.1e-25 119.8 96 66.7
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 6.7e-25 119.4 96 68.8
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.3e-23 115.2 87 67.8
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 2.4e-22 110.9 118 58.5
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.5e-19 101.7 62 80.6
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.5e-19 101.7 62 80.6
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.5e-19 101.7 55 81.8
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.9e-19 101.3 61 78.7
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 6.7e-17 92.8 62 75.8
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 4.4e-16 90.1 50 80.0
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 3.7e-15 87.0 50 78.0
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 7.0e-14 82.8 119 37.0
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 7.0e-14 82.8 67 67.2
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 1.6e-13 81.6 42 90.5
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 3.8e-12 77.0 57 64.9


User provided reference genes

Program Settings