Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1087 Trochodendron aralioides HOM05D000566 ORTHO05D000686 3.0e-143 511.9 276 100.0
TAR629G1141 Trochodendron aralioides HOM05D000566 ORTHO05D000686 1.1e-41 174.5 230 48.7
TAR622G1185 Trochodendron aralioides HOM05D000566 ORTHO05D000686 2.0e-38 163.7 233 47.2
Nn4g23703 Nelumbo nucifera HOM05D000566 ORTHO05D000686 9.4e-36 154.8 208 47.6
Nn3g17695 Nelumbo nucifera HOM05D000566 ORTHO05D000686 1.4e-34 151.0 226 44.7
TWI79G0728 Tripterygium wilfordii HOM05D000566 ORTHO05D000686 1.4e-31 141.0 226 43.4
MBI16_g33827_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D000686 5.3e-31 139.0 224 46.4
CiPaw.16G002400 Carya illinoinensis HOM05D000566 ORTHO05D000686 9.1e-31 138.3 218 42.2
GSVIVG01011966001 Vitis vinifera HOM05D000566 ORTHO05D000686 1.2e-30 137.9 220 43.6
Cfa018643 Carpinus fangiana HOM05D000566 ORTHO05D000686 2.0e-30 137.1 220 43.6
Haze_17426 Corylus avellana HOM05D000566 ORTHO05D000686 1.7e-29 134.0 220 42.3
Prupe.1G304200 Prunus persica HOM05D000566 ORTHO05D000686 2.2e-29 133.7 226 40.3
TWI31G0005 Tripterygium wilfordii HOM05D000566 ORTHO05D000686 2.2e-29 133.7 226 41.2
Aqoxy3G03895 Aquilegia oxysepala HOM05D000566 ORTHO05D000686 3.8e-29 132.9 221 43.9
Duzib251G0123 Durio zibethinus HOM05D000566 ORTHO05D000686 6.5e-29 132.1 220 40.0
Hma1.2p1_0406F.1_g145970 Hydrangea macrophylla HOM05D000566 ORTHO05D000686 8.5e-29 131.7 221 41.6
QL01p001020 Quercus lobata HOM05D000566 ORTHO05D000686 3.2e-28 129.8 210 44.3
Lj2g0021669 Lotus japonicus HOM05D000566 ORTHO05D000686 4.7e-27 125.9 241 40.2
PSO478G1853 Papaver somniferum HOM05D000566 ORTHO05D000686 6.1e-27 125.6 217 43.3
Thecc.02G362400 Theobroma cacao HOM05D000566 ORTHO05D000686 6.1e-27 125.6 236 38.6
CSS0023752 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D000686 8.0e-27 125.2 228 42.1
AUR62039739 Chenopodium quinoa HOM05D000566 ORTHO05D000686 1.0e-26 124.8 239 39.3
Glyma.20G185300 Glycine max HOM05D000566 ORTHO05D000686 1.0e-26 124.8 232 40.9
PSO017G4102 Papaver somniferum HOM05D000566 ORTHO05D000686 1.0e-26 124.8 217 43.3
MD13G1047800 Malus domestica HOM05D000566 ORTHO05D000686 1.8e-26 124.0 243 38.3
ClCG05G023080 Citrullus lanatus HOM05D000566 ORTHO05D000686 5.2e-26 122.5 220 40.5
Potri.010G130800 Populus trichocarpa HOM05D000566 ORTHO05D000686 5.2e-26 122.5 221 41.2
Sed0021770 Sechium edule HOM05D000566 ORTHO05D000686 5.2e-26 122.5 220 40.5
Manes.06G073200 Manihot esculenta HOM05D000566 ORTHO05D000686 6.7e-26 122.1 220 40.9
Glyma.01G089300 Glycine max HOM05D000566 ORTHO05D000686 8.8e-26 121.7 222 40.5
Atru.chr11.1373 Acer truncatum HOM05D000566 ORTHO05D000686 1.1e-25 121.3 211 43.1
Phvul.003G026100 Phaseolus vulgaris HOM05D000566 ORTHO05D000686 1.5e-25 120.9 219 41.1
Cc11_g10710 Coffea canephora HOM05D000566 ORTHO05D000686 2.0e-25 120.6 224 40.6
Gohir.D12G174300 Gossypium hirsutum HOM05D000566 ORTHO05D000686 2.0e-25 120.6 233 38.6
Gorai.008G187000 Gossypium raimondii HOM05D000566 ORTHO05D000686 2.0e-25 120.6 233 38.6
AUR62036291 Chenopodium quinoa HOM05D000566 ORTHO05D000686 3.3e-25 119.8 222 40.5
Gohir.A12G171900 Gossypium hirsutum HOM05D000566 ORTHO05D000686 1.3e-24 117.9 233 38.2
Oeu044620.1 Olea europaea HOM05D000566 ORTHO05D000686 1.3e-24 117.9 220 40.9
Sed0020395 Sechium edule HOM05D000566 ORTHO05D000686 1.3e-24 117.9 220 39.1
FvH4_4g28201 Fragaria vesca HOM05D000566 ORTHO05D000686 1.7e-24 117.5 216 38.9
FAN17G1282 Fragaria x ananassa HOM05D000566 ORTHO05D000686 1.7e-24 117.5 216 38.9
MBI10_g08550_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D000686 1.7e-24 117.5 245 41.6
vmacro10522 Vaccinium macrocarpon HOM05D000566 ORTHO05D000686 1.7e-24 117.5 228 39.5
FAN22G1085 Fragaria x ananassa HOM05D000566 ORTHO05D000686 2.2e-24 117.1 216 38.9
FAN12G0120 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.7e-24 116.3 216 38.4
Glyma.02G101100 Glycine max HOM05D000566 ORTHO05D000686 6.3e-24 115.5 221 39.8
Rhsim09G0113200 Rhododendron simsii HOM05D000566 ORTHO05D000686 8.2e-24 115.2 235 38.7
CsaV3_5G033910 Cucumis sativus L. HOM05D000566 ORTHO05D000686 1.1e-23 114.8 223 39.0
Sc04g0006780 Simmondsia chinensis HOM05D000566 ORTHO05D000686 1.1e-23 114.8 219 40.6
ATR0053G016 Amborella trichopoda HOM05D000566 ORTHO05D000686 1.8e-23 114.0 232 40.9
Ciclev10030626m.g Citrus clementina HOM05D000566 ORTHO05D000686 1.8e-23 114.0 219 38.8
EL10Ac5g11774 Beta vulgaris HOM05D000566 ORTHO05D000686 2.4e-23 113.6 216 39.8
COL.COLO4_07858 Corchorus olitorius HOM05D000566 ORTHO05D000686 2.4e-23 113.6 201 39.3
RcHm_v2.0_Chr4g0435971 Rosa chinensis HOM05D000566 ORTHO05D000686 2.4e-23 113.6 220 37.3
Sabra08G0087300 Salix brachista HOM05D000566 ORTHO05D000686 5.3e-23 112.5 237 38.0
VMungo1215G0552 Vigna mungo HOM05D000566 ORTHO05D000686 5.3e-23 112.5 220 38.6
Hund05772 Selenicereus undatus HOM05D000566 ORTHO05D000686 1.2e-22 111.3 221 40.3
CANSAT64G1342 Cannabis sativa HOM05D000566 ORTHO05D000686 2.0e-22 110.5 209 38.8
Lj3A1020T61 Lonicera japonica HOM05D000566 ORTHO05D000686 3.5e-22 109.8 222 39.6
Medtr5g053270 Medicago truncatula HOM05D000566 ORTHO05D000686 3.5e-22 109.8 229 37.6
Sabra10G0099700 Salix brachista HOM05D000566 ORTHO05D000686 3.5e-22 109.8 221 38.0
HPP92_021355 Vanilla planifolia HOM05D000566 ORTHO05D000686 4.5e-22 109.4 232 36.2
Ca_26577_v3 Cicer arietinum L. HOM05D000566 ORTHO05D000686 5.9e-22 109.0 221 37.6
Phvul.007G101700 Phaseolus vulgaris HOM05D000566 ORTHO05D000686 1.0e-21 108.2 233 37.3
MELO3C012209.2 Cucumis melo HOM05D000566 ORTHO05D000686 1.7e-21 107.5 223 37.7
Lalb_Chr02g0151811 Lupinus albus HOM05D000566 ORTHO05D000686 1.7e-21 107.5 224 40.6
Oeu024101.1 Olea europaea HOM05D000566 ORTHO05D000686 1.7e-21 107.5 222 38.7
Eucgr.B03060 Eucalyptus grandis HOM05D000566 ORTHO05D000686 2.9e-21 106.7 225 37.8
VMungo0720G2337 Vigna mungo HOM05D000566 ORTHO05D000686 5.0e-21 105.9 232 37.9
DCAR_023691 Daucus carota HOM05D000566 ORTHO05D000686 6.5e-21 105.5 219 36.5
CDE06G1661 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 1.5e-20 104.4 217 33.2
Dinv16515 Davidia involucrata HOM05D000566 ORTHO05D000686 1.9e-20 104.0 227 36.1
unitig_22.g6548 Utricularia gibba HOM05D000566 ORTHO05D000686 4.2e-20 102.8 230 36.1
PGR119G2528 Punica granatum HOM05D000566 ORTHO05D000686 5.5e-20 102.4 233 36.5
THA.LOC104805241 Tarenaya hassleriana HOM05D000566 ORTHO05D000686 7.2e-20 102.1 245 36.3
Actinidia14844 Actinidia chinensis HOM05D000566 ORTHO05D000686 3.6e-19 99.8 144 47.2
Nitab4.5_0005803g0040 Nicotiana tabacum HOM05D000566 ORTHO05D000686 8.0e-19 98.6 209 37.8
Nitab4.5_0004705g0020 Nicotiana tabacum HOM05D000566 ORTHO05D000686 1.0e-18 98.2 209 37.3
Lalb_Chr04g0254981 Lupinus albus HOM05D000566 ORTHO05D000686 3.0e-18 96.7 225 34.2
SalBow8G5562 Salvia bowleyana HOM05D000566 ORTHO05D000686 3.0e-18 96.7 231 36.4
arahy.Tifrunner.gnm1.ann1.LT4L2L Arachis hypogaea HOM05D000566 ORTHO05D000686 6.7e-18 95.5 234 33.8
Peaxi162Scf00367g00736 Petunia axillaris HOM05D000566 ORTHO05D000686 6.7e-18 95.5 218 35.8
Psat0s629g0240 Pisum sativum HOM05D000566 ORTHO05D000686 8.8e-18 95.1 224 33.5
Migut.L01102 Erythranthe guttata HOM05D000566 ORTHO05D000686 1.5e-17 94.4 236 34.3
TPR.G2702 Trifolium pratense HOM05D000566 ORTHO05D000686 1.5e-17 94.4 220 37.3
PGSC0003DMG400000805 Solanum tuberosum HOM05D000566 ORTHO05D000686 3.3e-17 93.2 216 36.1
ECA233G4730 Erigeron canadensis HOM05D000566 ORTHO05D000686 4.4e-17 92.8 222 36.0
BcaC06g33969 Brassica carinata HOM05D000566 ORTHO05D000686 1.3e-16 91.3 237 35.0
C07p34550 Brassica napus HOM05D000566 ORTHO05D000686 1.3e-16 91.3 237 35.0
BolC7t43987H Brassica oleracea HOM05D000566 ORTHO05D000686 1.3e-16 91.3 237 35.0
Aa31LG2G6620 Aethionema arabicum HOM05D000566 ORTHO05D000686 1.7e-16 90.9 243 32.9
arahy.Tifrunner.gnm1.ann1.P4R1Y8 Arachis hypogaea HOM05D000566 ORTHO05D000686 1.7e-16 90.9 227 34.8
arahy.Tifrunner.gnm1.ann1.83566S Arachis hypogaea HOM05D000566 ORTHO05D000686 2.2e-16 90.5 227 34.8
Solyc05g009930.3 Solanum lycopersicum HOM05D000566 ORTHO05D000686 2.8e-16 90.1 218 33.9
Sopen05g005740 Solanum pennellii HOM05D000566 ORTHO05D000686 2.8e-16 90.1 216 35.2
arahy.Tifrunner.gnm1.ann1.KR3NZ5 Arachis hypogaea HOM05D000566 ORTHO05D000686 3.7e-16 89.7 249 32.5
Thhalv10003588m.g Eutrema salsugineum HOM05D000566 ORTHO05D000686 4.8e-16 89.4 155 40.6
A06p42600 Brassica napus HOM05D000566 ORTHO05D000686 6.3e-16 89.0 226 35.8
BraA06t27175Z Brassica rapa HOM05D000566 ORTHO05D000686 6.3e-16 89.0 226 35.8
BcaC06g31124 Brassica carinata HOM05D000566 ORTHO05D000686 8.3e-16 88.6 224 36.2
THA.LOC104825718 Tarenaya hassleriana HOM05D000566 ORTHO05D000686 8.3e-16 88.6 221 34.4
CAN.G184.78 Capsicum annuum HOM05D000566 ORTHO05D000686 3.1e-15 86.7 149 39.6
Medtr1g093850 Medicago truncatula HOM05D000566 ORTHO05D000686 3.1e-15 86.7 212 35.8
HanXRQChr12g0365341 Helianthus annuus HOM05D000566 ORTHO05D000686 4.1e-15 86.3 215 36.3
Psat6g181200 Pisum sativum HOM05D000566 ORTHO05D000686 5.3e-15 85.9 179 38.5
Ca_10522_v3 Cicer arietinum L. HOM05D000566 ORTHO05D000686 7.0e-15 85.5 223 32.7
AT3G25690 Arabidopsis thaliana HOM05D000566 ORTHO05D000686 9.1e-15 85.1 154 38.3
Sp2g14950 Schrenkiella parvula HOM05D000566 ORTHO05D000686 9.1e-15 85.1 232 31.9
TPR.G9795 Trifolium pratense HOM05D000566 ORTHO05D000686 9.1e-15 85.1 206 35.0
AL5G14230 Arabidopsis lyrata HOM05D000566 ORTHO05D000686 1.2e-14 84.7 154 38.3
Zm00001eb296680 Zea mays HOM05D000566 ORTHO05D000686 1.2e-14 84.7 226 35.8
Lsat_1_v5_gn_8_37441 Lactuca sativa HOM05D000566 ORTHO05D000686 2.7e-14 83.6 226 36.3
Carub.0005s0351 Capsella rubella HOM05D000566 ORTHO05D000686 5.9e-14 82.4 220 34.1
CARHR288550 Cardamine hirsuta HOM05D000566 ORTHO05D000686 1.7e-13 80.9 229 34.1
Actinidia16611 Actinidia chinensis HOM05D000566 ORTHO05D000686 1.2e-11 74.7 218 33.0
Os12g0105300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D000686 2.1e-11 73.9 210 31.4
CDE04G1197 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 1.8e-10 70.9 167 32.3
Os11g0105750 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D000686 3.0e-10 70.1 210 31.0
Lj6A767T64 Lonicera japonica HOM05D000566 ORTHO05D000686 1.5e-09 67.8 157 33.8
Zm00001eb344430 Zea mays HOM05D000566 ORTHO05D000686 1.5e-09 67.8 141 39.7
SEGI_11508 Sequoiadendron giganteum HOM05D000566 ORTHO05D000686 4.8e-08 62.8 185 30.3
TAR629G0177 Trochodendron aralioides HOM05D000566 ORTHO05D000686 1.4e-07 61.2 50 70.0
QL10p023104 Quercus lobata HOM05D000566 ORTHO05D000686 9.1e-07 58.5 278 28.1
CiPaw.15G125500 Carya illinoinensis HOM05D000566 ORTHO05D000686 2.7e-06 57.0 272 32.7


User provided reference genes

Program Settings