Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 3.8e-123 444.9 231 100.0
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 4.7e-89 331.6 231 75.3
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 1.2e-87 327.0 230 75.7
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 2.0e-87 326.2 231 74.0
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 3.4e-87 325.5 231 74.5
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 7.5e-87 324.3 226 76.5
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 4.1e-85 318.5 231 74.0
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 2.0e-84 316.2 231 72.7
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 2.7e-84 315.8 231 73.2
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 1.0e-83 313.9 232 72.0
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 1.3e-83 313.5 215 74.9
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.1e-82 310.5 234 70.5
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 1.9e-82 309.7 231 71.4
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 3.3e-82 308.9 234 70.5
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 4.2e-82 308.5 231 71.0
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 4.2e-82 308.5 231 71.0
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 9.5e-82 307.4 233 69.1
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 2.1e-81 306.2 234 70.5
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 3.6e-81 305.4 234 70.1
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 4.7e-81 305.1 230 69.6
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 8.0e-81 304.3 231 70.1
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 8.0e-81 304.3 234 68.8
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 1.4e-80 303.5 232 71.6
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 1.4e-80 303.5 232 71.6
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 3.0e-80 302.4 221 72.9
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.0e-80 302.0 233 69.1
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 6.8e-80 301.2 226 70.8
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 6.8e-80 301.2 234 71.4
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.2e-79 300.4 229 70.3
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 2.6e-79 299.3 235 69.8
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 3.4e-79 298.9 234 70.9
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 4.4e-79 298.5 235 68.9
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 9.8e-79 297.4 215 72.6
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 1.7e-78 296.6 200 77.5
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 3.7e-78 295.4 231 68.4
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 4.9e-78 295.0 198 76.3
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 4.9e-78 295.0 235 68.9
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 6.3e-78 294.7 252 63.9
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 8.3e-78 294.3 230 67.8
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 8.3e-78 294.3 226 70.4
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 1.1e-77 293.9 231 67.1
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 2.4e-77 292.7 231 68.4
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 4.1e-77 292.0 233 66.1
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 4.1e-77 292.0 235 68.5
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 4.1e-77 292.0 226 69.0
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 5.4e-77 291.6 251 64.5
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 1.2e-76 290.4 251 64.1
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 1.6e-76 290.0 251 64.9
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 2.0e-76 289.7 250 64.8
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 2.0e-76 289.7 228 68.9
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 2.0e-76 289.7 227 69.6
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 2.0e-76 289.7 231 65.4
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 3.5e-76 288.9 224 68.8
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 7.8e-76 287.7 248 63.7
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 1.0e-75 287.3 235 67.2
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 1.0e-75 287.3 230 68.3
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 1.0e-75 287.3 236 67.4
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 1.0e-75 287.3 236 67.4
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 1.3e-75 287.0 229 65.1
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 1.3e-75 287.0 236 67.8
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.7e-75 286.6 246 64.6
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 1.7e-75 286.6 229 68.6
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 2.3e-75 286.2 251 62.9
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 2.9e-75 285.8 236 66.5
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 1.2e-73 280.4 234 64.1
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 1.2e-73 280.4 234 65.0
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 2.8e-73 279.3 238 64.7
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 5.2e-72 275.0 201 73.6
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 6.8e-72 274.6 239 65.3
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 8.9e-72 274.2 232 61.6
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 1.5e-71 273.5 239 65.3
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 2.6e-71 272.7 242 62.0
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 3.4e-71 272.3 240 63.3
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 4.4e-71 271.9 240 63.3
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 7.5e-71 271.2 244 61.9
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 7.5e-71 271.2 235 63.0
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 1.3e-70 270.4 198 73.7
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 2.4e-69 266.2 248 60.5
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 5.4e-69 265.0 234 61.5
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 7.0e-69 264.6 218 66.1
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 1.2e-68 263.8 261 56.3
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 1.6e-68 263.5 256 59.0
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 2.7e-68 262.7 248 59.3
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 6.0e-68 261.5 263 56.3
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 1.0e-67 260.8 232 62.9
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 1.9e-66 256.5 214 65.4
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 1.9e-66 256.5 199 67.8
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 2.5e-66 256.1 214 64.5
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 9.5e-66 254.2 236 61.0
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 4.4e-63 245.4 183 70.5
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 7.5e-63 244.6 181 72.4
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 1.1e-61 240.7 228 61.8
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 2.7e-60 236.1 195 63.6
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 1.3e-59 233.8 203 63.1
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.3e-59 233.8 157 73.9
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 2.4e-48 196.4 230 52.2
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 5.2e-48 195.3 223 52.9
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.1e-45 187.6 230 46.5
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 5.4e-45 185.3 154 61.7
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 3.0e-43 179.5 196 52.6
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 8.1e-41 171.4 159 57.9
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.5e-39 167.2 219 48.4
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 5.8e-39 165.2 155 55.5
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 4.9e-38 162.2 157 54.1
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 8.4e-38 161.4 208 45.7
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.2e-36 157.5 185 47.6
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 1.1e-34 151.0 112 68.8
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.4e-32 143.3 95 74.7
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 6.9e-32 141.7 109 69.7
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 1.5e-31 140.6 153 47.7
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 3.1e-24 116.3 151 47.7
CiPaw.01G076800 Carya illinoinensis HOM05D006960 ORTHO05D008699 2.6e-23 113.2 110 56.4
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 2.9e-22 109.8 157 44.6
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.8e-19 100.5 116 44.0
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 2.2e-14 83.6 217 30.0
Medtr5g015730 Medicago truncatula HOM05D006960 ORTHO05D008699 2.4e-08 63.5 40 77.5
Gorai.011G078500 Gossypium raimondii HOM05D006960 ORTHO05D008699 5.9e-07 58.9 60 53.3
Gorai.002G097600 Gossypium raimondii HOM05D006960 ORTHO05D018836 7.7e-07 58.5 60 55.0
Gohir.D08G121100 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.7e-06 57.4 60 53.3
Gohir.D10G162832 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.7e-06 57.4 60 53.3
Gohir.D05G312133 Gossypium hirsutum HOM05D006960 ORTHO05D008699 6.5e-06 55.5 60 51.7


User provided reference genes

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