Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1035 Trochodendron aralioides HOM05D000020 ORTHO05D416061 1.3e-60 236.1 114 100.0
TAR627G0430 Trochodendron aralioides HOM05D000020 ORTHO05D001240 7.4e-11 70.9 47 76.6
TAR629G1827 Trochodendron aralioides HOM05D000020 ORTHO05D001240 8.1e-10 67.4 66 59.1
Nn4g26502 Nelumbo nucifera HOM05D000020 ORTHO05D001240 1.5e-08 63.2 36 80.6
GSVIVG01014068001 Vitis vinifera HOM05D000020 ORTHO05D001240 2.6e-08 62.4 47 66.0
Hma1.2p1_0713F.1_g207780 Hydrangea macrophylla HOM05D000020 ORTHO05D001240 3.4e-08 62.0 35 80.0
MBI10_g36390_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D001240 7.6e-08 60.8 36 77.8
Gohir.D05G336500 Gossypium hirsutum HOM05D000020 ORTHO05D001240 9.9e-08 60.5 70 51.4
Thecc.07G140400 Theobroma cacao HOM05D000020 ORTHO05D001240 9.9e-08 60.5 36 75.0
CSS0018710 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D001240 1.3e-07 60.1 35 77.1
Eucgr.F01381 Eucalyptus grandis HOM05D000020 ORTHO05D001240 1.3e-07 60.1 50 62.0
Gorai.009G360300 Gossypium raimondii HOM05D000020 ORTHO05D001240 1.3e-07 60.1 70 50.0
Duzib213G0344 Durio zibethinus HOM05D000020 ORTHO05D001240 1.7e-07 59.7 36 75.0
Hund10380 Selenicereus undatus HOM05D000020 ORTHO05D001240 1.7e-07 59.7 50 70.0
Ca_03416_v3 Cicer arietinum L. HOM05D000020 ORTHO05D001240 2.9e-07 58.9 49 61.2
Ca_29739_v3 Cicer arietinum L. HOM05D000020 ORTHO05D001240 2.9e-07 58.9 49 61.2
Gohir.A01G045400 Gossypium hirsutum HOM05D000020 ORTHO05D001240 2.9e-07 58.9 36 72.2
Gohir.A01G145590 Gossypium hirsutum HOM05D000020 ORTHO05D001240 2.9e-07 58.9 36 72.2
Gorai.002G044300 Gossypium raimondii HOM05D000020 ORTHO05D001240 2.9e-07 58.9 36 72.2
Nn3g20647 Nelumbo nucifera HOM05D000020 ORTHO05D001240 2.9e-07 58.9 39 76.9
Glyma.13G262400 Glycine max HOM05D000020 ORTHO05D001240 3.8e-07 58.5 49 61.2
Gohir.A04G046100 Gossypium hirsutum HOM05D000020 ORTHO05D001240 4.9e-07 58.2 36 69.4
Ciclev10022921m.g Citrus clementina HOM05D000020 ORTHO05D001240 1.1e-06 57.0 36 69.4
Lj3g0020764 Lotus japonicus HOM05D000020 ORTHO05D001240 1.1e-06 57.0 51 56.9
Prupe.4G153400 Prunus persica HOM05D000020 ORTHO05D001240 1.1e-06 57.0 46 60.9
Os01g0243700 Oryza sativa ssp. japonica HOM05D000020 ORTHO05D001240 1.4e-06 56.6 55 54.5
COL.COLO4_17447 Corchorus olitorius HOM05D000020 ORTHO05D001240 2.4e-06 55.8 47 57.4
Dinv05248 Davidia involucrata HOM05D000020 ORTHO05D001240 2.4e-06 55.8 46 58.7
Haze_08465 Corylus avellana HOM05D000020 ORTHO05D001240 4.2e-06 55.1 53 56.6
Glyma.15G243000 Glycine max HOM05D000020 ORTHO05D001240 4.2e-06 55.1 49 57.1
Peaxi162Scf00573g00058 Petunia axillaris HOM05D000020 ORTHO05D001240 4.2e-06 55.1 35 74.3
CAN.G904.28 Capsicum annuum HOM05D000020 ORTHO05D001240 5.5e-06 54.7 35 74.3
Cc05_g10520 Coffea canephora HOM05D000020 ORTHO05D001240 7.1e-06 54.3 45 60.0
EL10Ac4g08455 Beta vulgaris HOM05D000020 ORTHO05D001240 9.3e-06 53.9 36 66.7
EL10Ac4g08477 Beta vulgaris HOM05D000020 ORTHO05D001240 9.3e-06 53.9 36 66.7
Nitab4.5_0009310g0010 Nicotiana tabacum HOM05D000020 ORTHO05D001240 9.3e-06 53.9 35 71.4


User provided reference genes

Program Settings