Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.4e-63 246.1 126 100.0
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.7e-37 159.5 118 72.0
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 9.9e-33 143.7 116 67.2
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.0e-29 133.7 117 65.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.7e-29 132.9 115 62.6
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.5e-28 129.8 117 59.0
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.9e-28 129.4 109 62.4
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 2.5e-28 129.0 109 61.5
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.2e-27 126.7 119 59.7
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.1e-27 125.9 118 56.8
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 2.8e-27 125.6 111 62.2
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 6.2e-27 124.4 86 70.9
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.4e-26 123.2 122 58.2
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.4e-26 123.2 129 56.6
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.8e-26 122.9 87 66.7
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.8e-26 122.9 83 73.5
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 2.4e-26 122.5 112 59.8
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 3.1e-26 122.1 80 72.5
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 4.0e-26 121.7 98 64.3
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 6.8e-26 120.9 110 58.2
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 8.9e-26 120.6 95 63.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 8.9e-26 120.6 111 56.8
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.5e-25 119.8 119 61.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.6e-25 119.0 93 63.4
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 2.6e-25 119.0 119 58.8
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 4.4e-25 118.2 113 60.2
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.3e-24 116.7 70 78.6
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.3e-24 116.7 70 78.6
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.3e-24 116.7 119 57.1
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.7e-24 116.3 80 75.0
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.7e-24 116.3 89 68.5
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 2.2e-24 115.9 118 56.8
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.2e-24 115.9 70 77.1
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 4.9e-24 114.8 69 76.8
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 8.4e-24 114.0 95 61.1
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 8.4e-24 114.0 74 71.6
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 8.4e-24 114.0 92 65.2
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 8.4e-24 114.0 78 71.8
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.4e-23 113.2 119 54.6
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.4e-23 113.2 67 80.6
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.9e-23 112.8 98 63.3
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.9e-23 112.8 95 65.3
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 2.4e-23 112.5 93 63.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.4e-23 112.5 115 52.2
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 2.4e-23 112.5 114 54.4
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 3.2e-23 112.1 115 52.2
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 3.2e-23 112.1 119 52.1
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 4.2e-23 111.7 85 64.7
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 5.4e-23 111.3 99 60.6
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 5.4e-23 111.3 87 63.2
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 7.1e-23 110.9 95 57.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 7.1e-23 110.9 126 54.0
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 9.3e-23 110.5 124 55.6
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 9.3e-23 110.5 90 63.3
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 9.3e-23 110.5 69 76.8
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.2e-22 110.2 93 60.2
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.2e-22 110.2 95 63.2
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.2e-22 110.2 70 74.3
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.6e-22 109.8 103 57.3
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.6e-22 109.8 103 57.3
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.7e-22 109.0 70 74.3
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.7e-22 109.0 116 57.8
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 2.7e-22 109.0 119 56.3
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 4.6e-22 108.2 88 63.6
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 6.0e-22 107.8 87 60.9
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 6.0e-22 107.8 87 60.9
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 6.0e-22 107.8 116 52.6
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 6.0e-22 107.8 66 78.8
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 6.0e-22 107.8 68 75.0
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 7.8e-22 107.5 119 49.6
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.0e-21 107.1 94 57.4
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.3e-21 106.7 126 53.2
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 2.3e-21 105.9 70 71.4
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.0e-21 105.5 115 53.9
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 3.9e-21 105.1 117 50.4
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 5.1e-21 104.8 121 49.6
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 5.1e-21 104.8 116 50.9
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 5.1e-21 104.8 119 49.6
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 6.6e-21 104.4 119 49.6
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 8.7e-21 104.0 108 50.9
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.5e-20 103.2 112 52.7
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 7.3e-20 100.9 88 61.4
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 8.1e-19 97.4 72 62.5
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.1e-18 97.1 72 62.5
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.1e-18 97.1 72 62.5
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.2e-17 93.6 65 69.2
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 4.4e-17 91.7 70 65.7
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 7.6e-17 90.9 64 67.2
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.4e-15 86.7 83 51.8
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.3e-13 80.1 87 51.7
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 3.0e-13 79.0 70 55.7
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 8.7e-13 77.4 87 48.3
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.1e-12 77.0 139 38.1
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 1.9e-12 76.3 47 74.5
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 9.6e-12 73.9 43 76.7
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.8e-11 72.4 174 33.3
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 9.0e-10 67.4 39 79.5
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 8.4e-08 60.8 39 69.2
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 6.0e-06 54.7 32 75.0


User provided reference genes

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