Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.0e-119 433.3 212 100.0
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 5.0e-45 185.3 98 91.8
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.2e-40 169.9 95 88.4
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 2.9e-37 159.5 140 61.4
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 3.0e-34 149.4 94 77.7
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 6.7e-34 148.3 95 75.8
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.5e-33 147.1 94 77.7
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 5.7e-33 145.2 94 74.5
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 7.5e-33 144.8 94 74.5
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 1.7e-32 143.7 121 61.2
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 1.7e-32 143.7 117 65.0
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.7e-32 142.5 136 56.6
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 4.8e-32 142.1 95 70.5
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.1e-31 141.0 136 57.4
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 1.1e-31 141.0 171 46.8
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.4e-31 140.6 109 65.1
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 2.4e-31 139.8 94 69.1
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 3.1e-31 139.4 108 63.0
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 3.1e-31 139.4 94 73.4
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 4.1e-31 139.0 94 73.4
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 7.0e-31 138.3 136 56.6
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 7.0e-31 138.3 136 56.6
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 7.0e-31 138.3 95 72.6
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 9.1e-31 137.9 110 60.0
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.2e-30 137.5 94 70.2
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 1.6e-30 137.1 136 54.4
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.6e-30 137.1 116 56.9
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.0e-30 136.7 96 69.8
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 2.0e-30 136.7 94 70.2
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.0e-30 136.7 141 53.2
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 2.7e-30 136.3 119 61.3
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.7e-30 136.3 162 49.4
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.5e-30 136.0 109 64.2
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 3.5e-30 136.0 139 50.4
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 4.5e-30 135.6 93 72.0
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.5e-30 135.6 125 56.0
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.5e-30 135.6 125 56.0
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 5.9e-30 135.2 124 55.6
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 5.9e-30 135.2 130 51.5
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 7.7e-30 134.8 159 46.5
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.0e-29 134.4 170 42.9
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 1.0e-29 134.4 130 56.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.3e-29 134.0 84 77.4
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.3e-29 134.0 221 41.2
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 1.3e-29 134.0 94 69.1
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 1.3e-29 134.0 116 58.6
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 1.7e-29 133.7 107 63.6
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.7e-29 133.7 94 69.1
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 2.2e-29 133.3 161 43.5
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 2.9e-29 132.9 116 55.2
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 3.8e-29 132.5 102 64.7
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 5.0e-29 132.1 201 43.8
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 5.0e-29 132.1 94 69.1
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 5.0e-29 132.1 114 59.6
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 6.5e-29 131.7 95 67.4
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 6.5e-29 131.7 224 41.1
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 6.5e-29 131.7 107 62.6
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.1e-28 131.0 93 69.9
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.5e-28 130.6 94 67.0
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 1.5e-28 130.6 102 63.7
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 2.5e-28 129.8 102 63.7
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 5.5e-28 128.6 94 64.9
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 5.5e-28 128.6 94 64.9
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 5.5e-28 128.6 94 64.9
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 5.5e-28 128.6 94 64.9
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 7.2e-28 128.3 85 72.9
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 7.2e-28 128.3 116 53.4
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 9.4e-28 127.9 95 68.4
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.2e-27 127.5 85 69.4
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 2.1e-27 126.7 94 63.8
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 2.1e-27 126.7 87 69.0
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 2.7e-27 126.3 94 63.8
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 2.7e-27 126.3 102 63.7
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 3.6e-27 125.9 95 63.2
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 4.7e-27 125.6 124 51.6
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 6.1e-27 125.2 114 55.3
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.3e-26 123.2 123 54.5
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 2.3e-26 123.2 116 51.7
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 2.3e-26 123.2 116 54.3
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 3.0e-26 122.9 95 65.3
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 3.0e-26 122.9 95 61.1
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 5.2e-26 122.1 95 63.2
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 5.2e-26 122.1 95 61.1
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 6.8e-26 121.7 129 51.2
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 8.8e-26 121.3 95 62.1
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 8.8e-26 121.3 163 44.2
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 8.8e-26 121.3 115 53.9
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 8.8e-26 121.3 115 53.0
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 1.5e-25 120.6 103 58.3
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 2.0e-25 120.2 117 51.3
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 2.0e-25 120.2 114 51.8
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 2.6e-25 119.8 128 50.0
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 3.4e-25 119.4 117 48.7
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 7.5e-25 118.2 136 48.5
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 9.8e-25 117.9 94 62.8
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.3e-24 117.5 114 53.5
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 1.3e-24 117.5 94 61.7
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.7e-24 117.1 94 56.4
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.7e-24 117.1 87 69.0
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.7e-24 117.1 87 69.0
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.7e-24 117.1 87 69.0
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.2e-24 116.7 95 65.3
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.4e-23 113.2 135 50.4
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.1e-23 112.8 95 60.0
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.1e-23 112.8 95 60.0
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 4.1e-23 112.5 116 47.4
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 5.4e-23 112.1 96 63.5
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 5.4e-23 112.1 95 57.9
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 5.4e-23 112.1 108 56.5
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 7.0e-23 111.7 94 59.6
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 2.0e-22 110.2 129 48.1
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 4.5e-22 109.0 94 57.4
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.7e-21 107.1 104 58.7
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 8.5e-21 104.8 119 47.9
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.5e-20 104.0 152 41.4
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.5e-20 104.0 84 57.1
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 5.5e-20 102.1 144 43.1
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.5e-20 102.1 114 48.2
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 3.6e-19 99.4 106 49.1
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 3.0e-18 96.3 116 46.6
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 5.2e-18 95.5 115 49.6
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 5.2e-18 95.5 114 46.5
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 5.2e-18 95.5 94 53.2
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 2.6e-17 93.2 95 51.6
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 9.8e-17 91.3 74 59.5
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 9.8e-17 91.3 137 39.4
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 4.9e-16 89.0 114 44.7
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.2e-14 84.3 94 43.6
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.2e-14 84.3 94 43.6
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.6e-14 84.0 95 46.3
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.0e-13 81.3 95 50.5
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.3e-13 80.9 89 39.3
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 2.3e-13 80.1 110 39.1
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 4.3e-12 75.9 76 48.7
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 2.3e-10 70.1 54 64.8
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 1.2e-09 67.8 65 58.5
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.2e-09 67.8 55 65.5
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 2.6e-09 66.6 119 37.0
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 2.9e-08 63.2 92 41.3
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 4.1e-07 59.3 77 39.0
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 5.4e-07 58.9 106 34.9
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 2.0e-06 57.0 107 36.4


User provided reference genes

Program Settings