Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 5.3e-268 927.2 484 100.0
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 3.1e-143 512.7 484 60.3
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.0e-133 481.1 485 57.3
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 6.5e-133 478.4 485 56.5
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.0e-122 444.5 430 58.4
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 1.7e-117 427.2 410 58.5
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 5.5e-116 422.2 411 57.2
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 3.6e-115 419.5 488 51.8
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 6.3e-112 408.7 486 52.3
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 5.3e-111 405.6 511 48.7
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.6e-110 404.1 493 50.9
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 2.9e-109 399.8 436 53.2
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 1.4e-106 391.0 384 59.4
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 1.2e-105 387.9 490 49.6
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 2.0e-105 387.1 490 49.8
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 3.4e-105 386.3 487 49.3
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 9.8e-105 384.8 501 49.3
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 2.2e-104 383.6 487 50.1
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 7.7e-102 375.2 489 49.7
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 6.6e-101 372.1 404 55.2
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.9e-100 370.5 500 49.2
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 3.6e-99 366.3 365 58.1
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 4.7e-99 365.9 496 47.8
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 1.0e-98 364.8 489 47.6
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 1.4e-98 364.4 414 51.7
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 1.4e-98 364.4 518 49.0
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 3.0e-98 363.2 524 47.1
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 9.8e-97 358.2 507 46.5
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.7e-96 357.5 396 53.8
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 2.2e-96 357.1 490 48.6
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 2.2e-96 357.1 406 51.7
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 2.8e-96 356.7 486 47.7
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 3.7e-96 356.3 392 53.6
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 8.3e-96 355.1 373 56.8
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 1.4e-95 354.4 405 52.6
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 1.8e-95 354.0 417 52.0
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 5.4e-95 352.4 485 46.6
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 1.6e-94 350.9 402 53.7
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 4.5e-94 349.4 487 46.8
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.3e-93 347.8 403 53.1
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 1.7e-93 347.4 479 45.9
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 2.9e-93 346.7 382 53.7
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 8.6e-93 345.1 547 43.7
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 1.1e-92 344.7 412 50.5
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 1.5e-92 344.4 408 51.5
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 3.3e-92 343.2 395 52.2
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 5.6e-92 342.4 480 45.8
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 1.6e-91 340.9 324 58.6
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 6.1e-91 339.0 375 52.8
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 3.1e-90 336.7 419 50.1
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 8.9e-90 335.1 385 51.2
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 1.5e-89 334.3 426 49.5
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 1.5e-89 334.3 480 45.6
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 4.4e-89 332.8 401 48.9
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.4e-89 332.8 505 44.4
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.9e-88 330.1 430 49.8
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 3.7e-88 329.7 392 50.8
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 4.9e-88 329.3 490 44.5
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 1.1e-87 328.2 392 51.0
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 1.9e-87 327.4 492 48.0
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 9.2e-87 325.1 373 50.7
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.5e-84 317.8 246 64.2
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 2.8e-83 313.5 345 55.7
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 4.7e-83 312.8 367 49.9
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 3.4e-81 306.6 217 69.6
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 4.4e-81 306.2 365 49.3
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 5.8e-81 305.8 250 62.4
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 9.8e-81 305.1 375 50.1
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 6.4e-80 302.4 487 42.1
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 8.3e-80 302.0 541 39.6
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 2.4e-79 300.4 374 47.6
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.2e-79 300.1 515 42.3
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 7.0e-79 298.9 356 47.2
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 9.2e-79 298.5 391 47.1
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 9.2e-79 298.5 391 47.1
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 1.2e-78 298.1 365 48.8
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.6e-78 297.7 364 48.9
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 2.7e-78 297.0 328 51.8
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 1.0e-77 295.0 372 47.8
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 1.0e-77 295.0 256 62.5
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.3e-77 294.7 360 50.6
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 2.3e-77 293.9 372 47.3
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 1.9e-76 290.8 332 49.1
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 3.3e-76 290.0 386 46.1
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 3.3e-76 290.0 242 59.9
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 4.3e-76 289.7 383 46.2
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.2e-75 288.1 382 46.6
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 4.7e-75 286.2 289 55.7
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 5.2e-74 282.7 330 51.2
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 5.2e-74 282.7 403 42.9
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 9.9e-73 278.5 144 95.8
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.0e-69 268.5 397 44.1
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 1.3e-69 268.1 364 48.1
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 3.3e-68 263.5 390 45.4
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 9.9e-65 251.9 266 52.3
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 8.4e-64 248.8 377 43.8
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.1e-59 234.2 409 42.5
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 2.8e-59 233.8 381 38.8
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 3.1e-58 230.3 165 69.1
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.0e-53 215.3 333 36.9
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 1.3e-51 208.4 176 53.4
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 2.1e-51 207.6 392 34.9
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 2.4e-50 204.1 407 34.4
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.5e-49 201.4 241 44.8
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.6e-46 191.4 121 71.9
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 3.3e-44 183.7 256 44.5
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.8e-43 180.6 122 69.7
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 3.2e-39 167.2 218 47.2
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 4.9e-32 143.3 210 45.7
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 1.6e-30 138.3 244 41.4
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 6.1e-30 136.3 115 60.9
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 1.7e-24 118.2 155 39.4
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 1.2e-22 112.1 190 34.7
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 8.8e-21 105.9 241 38.6
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 3.3e-20 104.0 81 60.5
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 9.7e-20 102.4 98 55.1
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 2.2e-19 101.3 105 42.9
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 4.8e-19 100.1 177 37.9
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 7.2e-07 59.7 135 30.4
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 8.0e-06 56.2 94 35.1


User provided reference genes

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