Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0715 Trochodendron aralioides HOM05D005459 ORTHO05D006751 9.4e-139 496.9 257 100.0
Dinv28337 Davidia involucrata HOM05D005459 ORTHO05D006751 4.4e-88 328.6 236 72.0
GSVIVG01028720001 Vitis vinifera HOM05D005459 ORTHO05D006751 1.4e-86 323.6 249 66.7
Nn3g17990 Nelumbo nucifera HOM05D005459 ORTHO05D006751 7.8e-85 317.8 267 62.5
MBI06_g32757_MAGBIO Magnolia biondii HOM05D005459 ORTHO05D006751 1.0e-84 317.4 240 67.9
vmacro10106 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 2.8e-82 309.3 236 69.9
CSS0021725 Camellia sinensis var. sinensis HOM05D005459 ORTHO05D006751 2.0e-80 303.1 261 64.4
Aqoxy7G00148 Aquilegia oxysepala HOM05D005459 ORTHO05D006751 3.7e-79 298.9 239 65.3
Rhsim09G0203700 Rhododendron simsii HOM05D005459 ORTHO05D006751 9.2e-78 294.3 239 66.9
Cpa.g.sc3.50 Carica papaya HOM05D005459 ORTHO05D006751 3.0e-76 289.3 239 65.3
Ciclev10007115m.g Citrus clementina HOM05D005459 ORTHO05D006751 6.6e-76 288.1 236 62.3
Haze_00111 Corylus avellana HOM05D005459 ORTHO05D006751 6.6e-76 288.1 235 62.6
Thecc.03G192700 Theobroma cacao HOM05D005459 ORTHO05D006751 2.5e-75 286.2 236 61.9
PSO384G0956 Papaver somniferum HOM05D005459 ORTHO05D006751 2.1e-74 283.1 252 62.3
Lj3C911T3 Lonicera japonica HOM05D005459 ORTHO05D006751 2.8e-74 282.7 245 60.4
QL09p010988 Quercus lobata HOM05D005459 ORTHO05D006751 6.2e-74 281.6 236 61.4
TWI39G1077 Tripterygium wilfordii HOM05D005459 ORTHO05D006751 8.1e-74 281.2 253 60.5
Duzib084G0355 Durio zibethinus HOM05D005459 ORTHO05D006751 3.1e-73 279.3 238 61.3
COL.COLO4_35657 Corchorus olitorius HOM05D005459 ORTHO05D006751 5.2e-73 278.5 237 59.5
Cfa016362 Carpinus fangiana HOM05D005459 ORTHO05D006751 6.8e-73 278.1 246 60.6
Manes.06G157100 Manihot esculenta HOM05D005459 ORTHO05D006751 8.9e-73 277.7 236 61.4
Hma1.2p1_0327F.1_g126730 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 1.5e-72 276.9 245 59.6
Gohir.D12G253700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 2.6e-72 276.2 236 60.2
PSO135G0062 Papaver somniferum HOM05D005459 ORTHO05D006751 4.4e-72 275.4 251 60.6
CANSAT64G0927 Cannabis sativa HOM05D005459 ORTHO05D006751 7.6e-72 274.6 237 60.8
Gorai.008G270800 Gossypium raimondii HOM05D005459 ORTHO05D006751 7.6e-72 274.6 236 59.7
Gohir.D12G252700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 1.3e-71 273.9 236 59.7
Potri.015G022400 Populus trichocarpa HOM05D005459 ORTHO05D006751 1.7e-71 273.5 237 61.6
Prupe.2G307100 Prunus persica HOM05D005459 ORTHO05D006751 1.9e-70 270.0 237 59.5
HanXRQChr14g0462841 Helianthus annuus HOM05D005459 ORTHO05D006751 2.4e-70 269.6 243 60.1
MD07G1285000 Malus domestica HOM05D005459 ORTHO05D006751 5.1e-68 261.9 237 57.8
Medtr1g028510 Medicago truncatula HOM05D005459 ORTHO05D006751 1.9e-67 260.0 235 58.3
Lalb_Chr10g0091331 Lupinus albus HOM05D005459 ORTHO05D006751 3.3e-67 259.2 237 58.6
Nitab4.5_0004934g0010 Nicotiana tabacum HOM05D005459 ORTHO05D006751 5.6e-67 258.5 251 56.6
FAN10G1104 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.6e-66 256.9 236 57.2
FAN10G1158 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.6e-66 256.9 236 57.2
PGR142G2821 Punica granatum HOM05D005459 ORTHO05D006751 2.8e-66 256.1 236 57.2
FvH4_7g31010 Fragaria vesca HOM05D005459 ORTHO05D006751 3.6e-66 255.8 236 56.4
FAN06G0889 Fragaria x ananassa HOM05D005459 ORTHO05D006751 3.6e-66 255.8 236 56.4
FAN06G3802 Fragaria x ananassa HOM05D005459 ORTHO05D006751 3.6e-66 255.8 236 56.4
arahy.Tifrunner.gnm1.ann1.7I62GA Arachis hypogaea HOM05D005459 ORTHO05D006751 6.2e-66 255.0 255 53.7
Lj6g0006101 Lotus japonicus HOM05D005459 ORTHO05D006751 1.1e-65 254.2 238 57.1
arahy.Tifrunner.gnm1.ann1.QW5IMS Arachis hypogaea HOM05D005459 ORTHO05D006751 1.4e-65 253.8 255 53.7
TPR.G33293 Trifolium pratense HOM05D005459 ORTHO05D006751 1.8e-65 253.4 235 56.6
ECA246G1562 Erigeron canadensis HOM05D005459 ORTHO05D006751 5.2e-65 251.9 222 55.0
FAN01G1429 Fragaria x ananassa HOM05D005459 ORTHO05D006751 6.9e-65 251.5 236 56.4
Peaxi162Scf00618g00514 Petunia axillaris HOM05D005459 ORTHO05D006751 8.9e-65 251.1 251 55.8
Cc02_g01880 Coffea canephora HOM05D005459 ORTHO05D006751 1.2e-64 250.8 235 57.4
Sc13g0009600 Simmondsia chinensis HOM05D005459 ORTHO05D006751 1.5e-64 250.4 235 58.3
RcHm_v2.0_Chr1g0380091 Rosa chinensis HOM05D005459 ORTHO05D006751 2.0e-64 250.0 236 56.4
THA.LOC104813180 Tarenaya hassleriana HOM05D005459 ORTHO05D006751 2.6e-64 249.6 251 54.6
DCAR_024416 Daucus carota HOM05D005459 ORTHO05D006751 3.4e-64 249.2 235 57.0
CAN.G589.10 Capsicum annuum HOM05D005459 ORTHO05D006751 5.8e-64 248.4 251 54.6
SalBow2G0671 Salvia bowleyana HOM05D005459 ORTHO05D006751 1.7e-63 246.9 235 55.7
VMungo0647G0840 Vigna mungo HOM05D005459 ORTHO05D006751 1.7e-63 246.9 235 54.0
Solyc06g051900.3 Solanum lycopersicum HOM05D005459 ORTHO05D006751 2.2e-63 246.5 251 53.8
Glyma.10G065800 Glycine max HOM05D005459 ORTHO05D006751 2.9e-63 246.1 248 55.2
Lsat_1_v5_gn_2_134221 Lactuca sativa HOM05D005459 ORTHO05D006751 2.9e-63 246.1 237 56.5
PGSC0003DMG400002352 Solanum tuberosum HOM05D005459 ORTHO05D006751 4.9e-63 245.4 251 53.0
Dinv35306 Davidia involucrata HOM05D005459 ORTHO05D006751 6.4e-63 245.0 236 56.4
Psat6g038640 Pisum sativum HOM05D005459 ORTHO05D006751 6.4e-63 245.0 235 54.5
Migut.F01051 Erythranthe guttata HOM05D005459 ORTHO05D006751 8.4e-63 244.6 236 56.8
Sopen06g017930 Solanum pennellii HOM05D005459 ORTHO05D006751 1.4e-62 243.8 251 53.4
SGA_v2.0_scaffold55G19735 Striga asiatica HOM05D005459 ORTHO05D006751 2.4e-62 243.0 243 54.3
Sed0000581 Sechium edule HOM05D005459 ORTHO05D006751 9.3e-62 241.1 247 51.4
Atru.chr1.246 Acer truncatum HOM05D005459 ORTHO05D006751 1.2e-61 240.7 186 64.5
CAN.G394.13 Capsicum annuum HOM05D005459 ORTHO05D006751 2.1e-61 240.0 247 54.3
Eucgr.K00329 Eucalyptus grandis HOM05D005459 ORTHO05D006751 2.1e-61 240.0 234 54.3
AUR62006152 Chenopodium quinoa HOM05D005459 ORTHO05D006751 2.7e-61 239.6 260 53.1
EL10Ac3g05347 Beta vulgaris HOM05D005459 ORTHO05D006751 3.5e-61 239.2 236 55.1
unitig_578.g16671 Utricularia gibba HOM05D005459 ORTHO05D006751 3.5e-61 239.2 234 54.7
Hma1.2p1_0327F.1_g126720 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 5.1e-60 235.3 179 65.4
Hund04829 Selenicereus undatus HOM05D005459 ORTHO05D006751 8.7e-60 234.6 272 50.7
CsaV3_3G021950 Cucumis sativus L. HOM05D005459 ORTHO05D006751 1.9e-59 233.4 240 50.8
CiPaw.06G007500 Carya illinoinensis HOM05D005459 ORTHO05D006751 3.3e-59 232.6 204 59.3
BcaC06g31482 Brassica carinata HOM05D005459 ORTHO05D006751 5.6e-59 231.9 250 51.2
SHI02435 Sapria himalayana HOM05D005459 ORTHO05D006751 1.1e-57 227.6 235 52.8
BolC7t43505H Brassica oleracea HOM05D005459 ORTHO05D006751 1.4e-57 227.3 251 50.6
ATR0661G386 Amborella trichopoda HOM05D005459 ORTHO05D006751 2.4e-57 226.5 240 51.7
HPP92_026772 Vanilla planifolia HOM05D005459 ORTHO05D006751 3.1e-57 226.1 251 51.4
FAN03G0338 Fragaria x ananassa HOM05D005459 ORTHO05D006751 4.0e-57 225.7 236 52.5
A06p46000 Brassica napus HOM05D005459 ORTHO05D006751 1.2e-56 224.2 251 49.8
C07p29540 Brassica napus HOM05D005459 ORTHO05D006751 1.2e-56 224.2 250 50.0
BraA06t27464Z Brassica rapa HOM05D005459 ORTHO05D006751 1.2e-56 224.2 251 49.8
Thhalv10027718m.g Eutrema salsugineum HOM05D005459 ORTHO05D006751 5.8e-56 221.9 250 49.6
ClCG05G008710 Citrullus lanatus HOM05D005459 ORTHO05D006751 9.9e-56 221.1 276 44.2
AT5G41480 Arabidopsis thaliana HOM05D005459 ORTHO05D006751 1.7e-55 220.3 251 49.8
Carub.0007s3402 Capsella rubella HOM05D005459 ORTHO05D006751 2.2e-55 219.9 251 48.6
Sp7g00510 Schrenkiella parvula HOM05D005459 ORTHO05D006751 1.4e-54 217.2 250 48.0
AL7G47930 Arabidopsis lyrata HOM05D005459 ORTHO05D006751 1.9e-54 216.9 254 47.6
Aa31LG9G520 Aethionema arabicum HOM05D005459 ORTHO05D006751 3.5e-53 212.6 246 46.7
CDE02G4072 Ceratophyllum demersum HOM05D005459 ORTHO05D006751 4.6e-53 212.2 239 49.4
Zm00001eb410070 Zea mays HOM05D005459 ORTHO05D006751 2.8e-50 203.0 240 48.8
Os12g0623800 Oryza sativa ssp. japonica HOM05D005459 ORTHO05D006751 4.0e-49 199.1 245 49.0
Actinidia03157 Actinidia chinensis HOM05D005459 ORTHO05D006751 9.0e-49 198.0 141 70.9
AUR62019336 Chenopodium quinoa HOM05D005459 ORTHO05D006751 1.6e-45 187.2 231 48.5
SEGI_13502 Sequoiadendron giganteum HOM05D005459 ORTHO05D006751 3.4e-40 169.5 209 45.9
CARHR213570 Cardamine hirsuta HOM05D005459 ORTHO05D006751 1.7e-39 167.2 135 63.0
Phvul.001G060700 Phaseolus vulgaris HOM05D005459 ORTHO05D006751 2.9e-39 166.4 247 41.3
Mapoly0084s0006 Marchantia polymorpha HOM05D005459 ORTHO05D006751 9.3e-38 161.4 235 42.6
Sabra15G0016700 Salix brachista HOM05D005459 ORTHO05D006751 3.5e-37 159.5 159 56.6
vmacro20553 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 9.7e-35 151.4 199 45.7
Ca_12679_v3 Cicer arietinum L. HOM05D005459 ORTHO05D006751 1.5e-32 144.1 160 49.4
Gohir.A12G251800 Gossypium hirsutum HOM05D005459 ORTHO05D006751 1.6e-29 134.0 91 71.4
Ah.13g069840 Amaranthus hybridus HOM05D005459 ORTHO05D006751 2.1e-29 133.7 173 47.4
AagrBONN_evm.TU.Sc2ySwM_117.3837 Anthoceros agrestis HOM05D005459 ORTHO05D006751 3.0e-28 129.8 134 51.5
SMO118G0218 Selaginella moellendorffii HOM05D005459 ORTHO05D006751 8.7e-28 128.3 235 33.6
Glyma.14G160851 Glycine max HOM05D005459 ORTHO05D006751 1.1e-27 127.9 149 48.3
Pp3c1_19310 Physcomitrium patens HOM05D005459 ORTHO05D006751 1.5e-27 127.5 159 42.8
Medtr7g100937 Medicago truncatula HOM05D005459 ORTHO05D006751 2.5e-27 126.7 145 49.7
CARHR289170 Cardamine hirsuta HOM05D005459 ORTHO05D006751 6.3e-26 122.1 88 68.2
Actinidia31865 Actinidia chinensis HOM05D005459 ORTHO05D006751 6.9e-25 118.6 167 44.3
Hma1.2p1_1655F.1_g295920 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 2.0e-24 117.1 85 65.9
MELO3C026934.2 Cucumis melo HOM05D005459 ORTHO05D006751 1.0e-23 114.8 87 62.1
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 2.2e-23 113.6 149 40.9
Medtr7g100940 Medicago truncatula HOM05D005459 ORTHO05D006751 1.6e-21 107.5 74 70.3
Ah.13g069860 Amaranthus hybridus HOM05D005459 ORTHO05D006751 7.9e-21 105.1 76 67.1
Cre03.g176800 Chlamydomonas reinhardtii HOM05D005459 ORTHO05D006751 1.4e-09 67.8 203 29.1
PRCOL_00002571 Prasinoderma coloniale HOM05D005459 ORTHO05D006751 5.9e-08 62.4 267 24.0
Atru.chr1.247 Acer truncatum HOM05D005459 ORTHO05D006751 8.5e-07 58.5 53 56.6
CARHR288690 Cardamine hirsuta HOM05D005459 ORTHO05D006751 3.2e-06 56.6 112 35.7


User provided reference genes

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