Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 7.3e-285 983.4 566 100.0
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.5e-192 676.8 538 68.8
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 3.4e-189 665.6 527 69.6
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.4e-182 643.7 493 70.0
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 9.5e-176 620.9 558 66.7
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.7e-169 600.1 538 61.9
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.2e-164 583.2 495 65.1
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 1.6e-162 577.0 539 61.2
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.5e-162 575.9 497 63.8
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.0e-161 574.3 539 60.1
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 7.3e-160 568.2 538 60.0
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 3.2e-155 552.7 488 63.5
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.2e-154 550.8 570 61.2
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 1.6e-154 550.4 544 61.8
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 6.6e-153 545.0 496 63.9
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 8.6e-153 544.7 595 57.5
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.5e-152 543.9 539 57.9
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 9.5e-152 541.2 497 62.0
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 4.9e-148 528.9 539 56.8
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 4.9e-148 528.9 492 60.0
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 8.4e-148 528.1 493 60.0
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 4.1e-147 525.8 539 56.4
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 6.0e-146 521.9 492 59.6
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.0e-145 521.2 562 54.3
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.0e-145 519.6 492 59.6
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 6.6e-145 518.5 497 60.0
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 5.6e-144 515.4 502 59.0
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 7.3e-144 515.0 653 52.2
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 9.6e-144 514.6 495 59.6
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.8e-142 510.4 499 59.5
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 7.8e-138 495.0 552 53.1
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.0e-137 494.6 497 59.8
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.0e-137 493.0 552 52.9
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.1e-137 492.3 553 53.2
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 7.3e-136 488.4 555 53.2
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 1.3e-135 487.6 498 57.8
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 6.9e-134 481.9 462 64.1
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 2.2e-132 476.9 493 57.6
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 6.4e-132 475.3 504 55.4
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 1.3e-129 467.6 464 59.5
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 3.9e-129 466.1 529 56.0
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 1.1e-128 464.5 529 55.6
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.5e-128 464.2 498 55.2
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 5.6e-128 462.2 538 56.3
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 9.6e-128 461.5 500 52.4
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 4.0e-126 456.1 574 50.9
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.5e-125 454.1 504 52.6
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 7.6e-125 451.8 538 50.4
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 3.2e-123 446.4 494 53.2
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.2e-122 444.5 507 52.7
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 2.7e-122 443.4 557 50.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 4.6e-122 442.6 437 56.3
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 3.3e-120 436.4 493 55.0
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 4.8e-119 432.6 437 59.0
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 2.9e-116 423.3 494 53.2
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 4.8e-111 406.0 496 50.4
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 2.4e-110 403.7 461 57.7
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 6.9e-110 402.1 452 54.2
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 1.5e-109 401.0 497 50.3
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 1.0e-108 398.3 498 50.2
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 6.5e-108 395.6 498 50.4
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 1.1e-107 394.8 494 50.0
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 9.3e-107 391.7 501 50.3
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 7.9e-106 388.7 500 50.2
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 7.9e-106 388.7 500 50.2
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 2.3e-105 387.1 501 50.3
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 8.7e-105 385.2 417 58.0
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 4.8e-103 379.4 496 49.6
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 6.3e-103 379.0 493 49.1
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 6.3e-103 379.0 470 51.9
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.1e-102 376.7 496 49.6
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.2e-101 374.8 498 48.4
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 2.1e-98 364.0 352 59.7
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.7e-96 355.9 421 50.8
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 5.5e-91 339.3 495 45.7
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 1.0e-84 318.5 412 51.9
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 5.0e-84 316.2 255 66.7
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 4.7e-82 309.7 370 53.8
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 1.7e-76 291.2 395 45.1
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 7.2e-75 285.8 311 55.0
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 2.1e-74 284.3 324 54.9
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 9.8e-48 195.7 243 48.1
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 8.6e-44 182.6 315 40.6
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 5.6e-43 179.9 173 57.2
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 2.6e-40 171.0 317 42.0
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 5.6e-27 126.7 106 59.4
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 1.2e-24 119.0 551 28.9
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 5.4e-22 110.2 160 45.0
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 3.0e-20 104.4 72 69.4
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 5.1e-20 103.6 93 86.0
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 2.5e-19 101.3 224 36.2
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 5.6e-19 100.1 62 85.5
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.3e-18 99.0 62 82.3
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.1e-18 98.2 53 94.3
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 9.0e-17 92.8 65 64.6
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 4.6e-13 80.5 672 25.0
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.0e-12 79.3 44 88.6
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 2.5e-11 74.7 54 66.7
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 8.1e-10 69.7 37 91.9
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 1.1e-09 69.3 74 54.1
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 4.0e-09 67.4 48 66.7
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 2.0e-08 65.1 74 51.4
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 5.8e-08 63.5 58 60.3
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 5.8e-08 63.5 58 60.3
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 1.7e-07 62.0 74 50.0
FAN13G3012 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.8e-07 60.8 43 65.1
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 1.1e-06 59.3 284 27.5
HPP92_022727 Vanilla planifolia HOM05D007238 ORTHO05D009206 2.4e-06 58.2 121 36.4
FvH4_5g29470 Fragaria vesca HOM05D007238 ORTHO05D009206 7.1e-06 56.6 56 57.1


User provided reference genes

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