Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 3.7e-70 268.1 133 100.0
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.1e-29 130.6 125 57.6
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.9e-27 125.6 127 51.2
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 9.1e-21 104.0 121 47.1
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.0e-16 90.5 112 42.9
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 3.0e-16 89.0 87 52.9
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.0e-16 88.6 102 46.1
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.2e-16 88.2 117 42.7
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.8e-16 87.8 117 41.9
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 8.9e-16 87.4 103 45.6
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 8.9e-16 87.4 102 45.1
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 3.2e-13 79.0 89 49.4
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 1.2e-12 77.0 94 40.4
MSTRG.19633 Avicennia marina HOM05D008138 ORTHO05D010043 2.7e-12 75.9 91 46.2
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 5.9e-12 74.7 96 40.6
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 5.9e-12 74.7 94 40.4
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 7.8e-12 74.3 90 42.2
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 5.0e-11 71.6 88 40.9
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-10 69.7 97 39.2
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 1.9e-10 69.7 94 41.5
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 2.5e-10 69.3 88 38.6
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 2.5e-10 69.3 88 43.2
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 4.3e-10 68.6 96 38.5
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 9.5e-10 67.4 97 38.1
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.2e-09 67.0 107 36.4
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.6e-09 65.5 91 37.4
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.7e-09 65.1 97 36.1
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.1e-09 64.7 90 37.8
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.1e-09 64.7 97 36.1
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 6.1e-09 64.7 99 37.4
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.0e-09 64.3 90 37.8
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.0e-08 63.9 97 37.1
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 2.3e-08 62.8 73 42.5
Sopen01g005610 Solanum pennellii HOM05D056881 ORTHO05D010043 2.3e-08 62.8 89 33.7
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 4.0e-08 62.0 87 39.1
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 5.2e-08 61.6 91 38.5
Solyc01g010060.2 Solanum lycopersicum HOM05D056881 ORTHO05D010043 6.8e-08 61.2 89 32.6
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.9e-08 60.8 97 35.1
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 8.9e-08 60.8 117 34.2
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 8.9e-08 60.8 88 35.2
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 1.2e-07 60.5 104 36.5
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.5e-07 60.1 82 37.8
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 1.5e-07 60.1 96 38.5
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 4.4e-07 58.5 91 38.5
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 2.9e-06 55.8 111 32.4
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 4.9e-06 55.1 93 38.7
PGSC0003DMG400007526 Solanum tuberosum HOM05D031546 ORTHO05D030641 6.4e-06 54.7 81 37.0


User provided reference genes

Program Settings