Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 4.8e-188 661.0 332 100.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 9.3e-123 444.1 330 69.7
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 1.6e-114 416.8 333 67.0
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 1.0e-108 397.5 328 61.6
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 1.0e-108 397.5 334 64.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 5.5e-107 391.7 334 64.4
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 7.9e-106 387.9 332 61.1
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.8e-105 386.7 335 61.2
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 8.7e-105 384.4 270 72.6
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 3.3e-104 382.5 333 64.0
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 9.7e-104 380.9 248 73.8
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 3.7e-103 379.0 333 61.6
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 6.9e-102 374.8 241 74.7
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 9.1e-102 374.4 241 74.7
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 4.5e-101 372.1 342 59.6
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 4.5e-101 372.1 342 59.4
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 2.2e-100 369.8 332 59.9
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.9e-99 366.7 281 68.0
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 4.7e-98 362.1 333 56.5
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 6.1e-98 361.7 262 66.4
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 3.9e-97 359.0 337 57.6
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 4.4e-96 355.5 333 56.8
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 4.4e-96 355.5 333 56.8
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 7.4e-96 354.8 330 58.2
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 9.7e-96 354.4 338 57.4
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.3e-95 354.0 339 57.5
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.2e-95 353.2 266 64.3
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.8e-95 352.8 335 57.3
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 3.7e-95 352.4 335 57.3
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 4.8e-95 352.1 337 56.1
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.2e-95 351.3 332 57.2
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 8.2e-95 351.3 323 56.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-94 350.5 275 65.1
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.4e-94 350.5 335 59.1
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 1.8e-94 350.1 334 56.0
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 3.1e-94 349.4 247 69.2
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 5.3e-94 348.6 270 63.7
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 5.3e-94 348.6 250 69.6
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 9.1e-94 347.8 334 55.7
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 9.1e-94 347.8 334 55.7
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 9.1e-94 347.8 338 56.8
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 1.5e-93 347.1 285 61.4
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 2.6e-93 346.3 331 56.5
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.4e-93 345.9 266 62.8
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 5.9e-93 345.1 273 61.5
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 5.9e-93 345.1 229 72.9
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 7.7e-93 344.7 247 67.6
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 7.7e-93 344.7 253 68.4
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.0e-92 344.4 304 62.2
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.0e-92 344.4 333 56.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 1.0e-92 344.4 320 58.4
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.0e-92 344.4 338 54.4
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 2.2e-92 343.2 330 54.8
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.2e-92 343.2 338 56.2
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 3.8e-92 342.4 334 56.6
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 3.8e-92 342.4 338 55.0
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 5.0e-92 342.0 342 54.4
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 6.5e-92 341.7 339 54.6
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.4e-91 340.5 262 63.7
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.4e-91 340.5 340 53.5
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.9e-91 340.1 332 56.3
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 3.2e-91 339.3 331 55.3
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 1.2e-90 337.4 276 62.0
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.2e-90 337.4 329 55.9
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.1e-90 336.7 245 66.1
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.7e-90 336.3 332 56.9
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 3.6e-90 335.9 325 55.1
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 3.6e-90 335.9 332 56.9
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.0e-89 334.3 328 55.2
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 1.8e-89 333.6 246 65.0
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.9e-89 332.4 249 66.3
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.1e-88 330.9 270 60.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.0e-88 330.1 313 58.1
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 2.6e-88 329.7 250 66.4
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.6e-88 329.7 332 57.8
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 4.4e-88 328.9 340 54.1
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 5.7e-88 328.6 253 65.2
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 7.4e-88 328.2 253 65.2
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 7.4e-88 328.2 280 61.8
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.3e-87 327.4 302 61.3
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.3e-87 327.4 330 55.5
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 2.8e-87 326.2 331 55.6
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 6.3e-87 325.1 332 53.3
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 2.4e-86 323.2 284 59.5
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 5.3e-86 322.0 334 52.7
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.6e-85 320.5 233 66.5
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.6e-85 320.5 273 58.2
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.5e-85 319.3 323 55.1
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 4.5e-85 318.9 273 58.6
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 7.7e-85 318.2 255 62.4
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 6.5e-84 315.1 219 68.9
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 4.7e-82 308.9 366 47.8
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 2.2e-79 300.1 285 55.4
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.0e-76 291.2 334 51.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 2.9e-76 289.7 299 52.5
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 2.5e-75 286.6 259 57.1
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 4.7e-74 282.3 232 59.9
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 6.8e-73 278.5 338 47.6
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.0e-64 250.4 234 51.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.7e-63 246.1 165 72.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 1.8e-57 227.3 290 47.6
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 2.3e-57 226.9 237 51.9
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.5e-56 224.2 158 69.6
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.9e-51 207.2 277 46.6
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.5e-51 206.8 138 74.6
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 3.3e-51 206.5 143 72.0
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 4.3e-51 206.1 277 44.4
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 8.0e-50 201.8 248 41.5
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.9e-49 198.4 136 72.1
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.3e-47 194.5 240 42.1
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.3e-44 184.5 155 57.4
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 5.0e-44 182.6 138 65.9
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.3e-43 178.7 196 52.6
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.2e-42 177.9 292 37.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 3.6e-42 176.4 131 63.4
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.1e-42 175.3 197 54.3
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 4.9e-39 166.0 129 64.3
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 3.2e-38 163.3 194 52.1
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.4e-33 147.9 207 45.9
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.1e-33 146.7 138 50.0
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 2.3e-28 130.6 108 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.5e-24 117.9 241 32.0
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.6e-19 99.4 64 75.0
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 2.1e-13 80.9 75 58.7
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 1.8e-09 67.8 75 50.7


User provided reference genes

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