Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 4.5e-77 291.2 147 100.0
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 5.9e-29 131.3 157 51.0
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 2.5e-27 125.9 150 47.3
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 7.2e-27 124.4 150 42.7
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 1.0e-25 120.6 153 45.8
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 1.5e-24 116.7 146 45.9
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 5.7e-24 114.8 124 49.2
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 1.3e-23 113.6 152 45.4
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 1.4e-22 110.2 157 47.8
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 1.4e-22 110.2 125 47.2
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 1.8e-22 109.8 122 52.5
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 4.1e-22 108.6 172 42.4
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 7.0e-22 107.8 151 43.0
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 2.7e-21 105.9 154 42.9
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 2.7e-21 105.9 150 42.7
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 3.5e-21 105.5 141 42.6
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 4.5e-21 105.1 149 40.9
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 4.5e-21 105.1 150 40.7
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 5.9e-21 104.8 155 41.3
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 5.9e-21 104.8 150 41.3
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 5.9e-21 104.8 151 43.0
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 7.7e-21 104.4 145 42.8
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 1.0e-20 104.0 149 43.0
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 6.6e-20 101.3 145 42.1
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 1.1e-19 100.5 149 40.9
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 1.5e-19 100.1 144 47.9
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 3.3e-19 99.0 152 41.4
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 3.3e-19 99.0 152 41.4
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 4.2e-19 98.6 160 38.1
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 5.5e-19 98.2 127 46.5
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 5.5e-19 98.2 127 47.2
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 5.5e-19 98.2 127 47.2
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 2.1e-18 96.3 139 45.3
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 8.9e-17 90.9 136 44.9
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 1.5e-16 90.1 151 41.7
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 1.5e-16 90.1 147 39.5
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 2.6e-16 89.4 157 36.3
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 2.6e-16 89.4 119 42.9
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 3.4e-16 89.0 155 38.1
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 3.4e-16 89.0 121 44.6
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 3.4e-16 89.0 119 42.9
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 3.4e-16 89.0 119 42.9
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 5.7e-16 88.2 184 34.2
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 5.7e-16 88.2 119 42.9
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 2.2e-15 86.3 148 35.8
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 6.3e-15 84.7 128 42.2
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 1.4e-14 83.6 111 45.0
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 2.4e-14 82.8 142 38.7
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 4.1e-14 82.0 151 38.4
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 4.1e-14 82.0 153 37.9
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 7.0e-14 81.3 151 39.1
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 7.0e-14 81.3 151 37.7
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 9.2e-14 80.9 151 39.1
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 2.0e-13 79.7 154 37.0
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 2.7e-13 79.3 151 38.4
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 2.7e-13 79.3 151 39.1
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 2.7e-13 79.3 138 35.5
Sed0018728 Sechium edule HOM05D007408 ORTHO05D009325 2.7e-13 79.3 121 41.3
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 3.5e-13 79.0 143 38.5
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 3.5e-13 79.0 126 38.1
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 4.5e-13 78.6 152 36.8
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 1.0e-12 77.4 149 36.9
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 1.7e-12 76.6 132 34.1
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 1.7e-12 76.6 149 37.6
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 1.7e-12 76.6 149 37.6
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 1.7e-12 76.6 149 37.6
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 2.3e-12 76.3 147 37.4
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 3.8e-12 75.5 144 38.9
PSO063G0414 Papaver somniferum HOM05D007408 ORTHO05D009325 5.0e-12 75.1 151 39.1
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 8.6e-12 74.3 121 39.7
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 1.5e-11 73.6 122 39.3
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 1.5e-11 73.6 116 40.5
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 1.5e-11 73.6 125 40.0
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.5e-11 72.8 135 35.6
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 3.3e-11 72.4 127 37.0
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 3.3e-11 72.4 123 36.6
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 5.6e-11 71.6 116 40.5
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 5.6e-11 71.6 116 40.5
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 9.5e-11 70.9 141 34.8
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 9.5e-11 70.9 141 34.8
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 1.2e-10 70.5 141 34.0
Manes.14G095101 Manihot esculenta HOM05D007408 ORTHO05D009325 1.2e-10 70.5 91 45.1
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 2.1e-10 69.7 138 34.1
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 2.8e-10 69.3 116 37.9
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 8.0e-10 67.8 116 34.5
BcaC05g26429 Brassica carinata HOM05D007408 ORTHO05D009325 1.0e-09 67.4 118 39.8
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 1.0e-09 67.4 144 32.6
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 1.4e-09 67.0 119 35.3
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 1.4e-09 67.0 116 34.5
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 1.8e-09 66.6 116 37.1
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 1.8e-09 66.6 116 35.3
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 1.8e-09 66.6 116 35.3
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 3.1e-09 65.9 119 35.3
C05p24760 Brassica napus HOM05D007408 ORTHO05D009325 3.1e-09 65.9 118 39.8
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 3.1e-09 65.9 116 37.1
A09p39710 Brassica napus HOM05D007408 ORTHO05D009325 5.2e-09 65.1 116 37.1
BraA09t39470Z Brassica rapa HOM05D007408 ORTHO05D009325 5.2e-09 65.1 116 37.1
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 2.0e-08 63.2 116 32.8
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 2.6e-08 62.8 116 37.1
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 3.4e-08 62.4 117 35.9
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 8.3e-07 57.8 110 31.8
Carub.0001s2482 Capsella rubella HOM05D007408 ORTHO05D009325 1.1e-06 57.4 124 33.1
EL10Ac6g14549 Beta vulgaris HOM05D007408 ORTHO05D009325 1.4e-06 57.0 154 30.5
Zm00001eb188590 Zea mays HOM05D038004 ORTHO05D037191 2.4e-06 56.2 125 36.0
BolC6t38845H Brassica oleracea HOM05D000085 ORTHO05D000274 4.1e-06 55.5 107 32.7
HPP92_003100 Vanilla planifolia HOM05D007408 ORTHO05D009325 4.1e-06 55.5 54 55.6
BolC7t43970H Brassica oleracea HOM05D007408 ORTHO05D009325 7.0e-06 54.7 110 38.2


User provided reference genes

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