Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 8.1e-205 716.8 362 100.0
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 5.0e-146 521.5 318 82.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 4.2e-145 518.5 325 78.2
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 2.3e-143 512.7 318 80.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.0e-142 509.6 318 79.2
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 7.5e-142 507.7 337 76.0
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 4.1e-140 501.9 319 75.5
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 7.0e-140 501.1 317 76.7
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 7.0e-140 501.1 319 75.2
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.6e-139 500.0 319 75.2
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.6e-139 500.0 317 77.3
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.5e-139 498.4 318 80.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.7e-138 496.5 318 75.8
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.2e-138 496.1 318 79.6
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.8e-138 495.4 320 75.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 6.5e-138 494.6 318 74.8
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.5e-137 493.4 314 76.1
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.2e-137 492.3 318 77.4
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 3.6e-136 488.8 316 75.0
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.7e-136 488.4 318 76.4
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 8.0e-136 487.6 324 74.4
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 2.3e-135 486.1 318 75.5
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 8.8e-135 484.2 316 77.5
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.2e-134 483.8 321 77.3
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.5e-134 483.4 318 75.8
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 2.6e-134 482.6 317 72.9
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 3.7e-133 478.8 318 73.6
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 3.7e-133 478.8 318 75.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.8e-132 476.5 318 75.2
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 3.1e-132 475.7 318 73.3
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 9.2e-132 474.2 320 73.4
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 5.9e-131 471.5 316 75.3
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.3e-130 470.3 318 74.5
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.3e-130 469.5 316 73.1
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.9e-130 469.2 315 74.3
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 2.9e-130 469.2 316 75.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 3.8e-130 468.8 316 72.8
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 8.6e-130 467.6 318 73.3
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.1e-129 467.2 318 72.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.5e-129 466.8 317 72.2
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 2.5e-129 466.1 316 72.2
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 2.5e-129 466.1 316 72.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 7.3e-129 464.5 316 72.5
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 9.5e-129 464.2 303 75.2
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.2e-128 463.8 316 72.8
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.2e-128 463.8 316 72.2
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.2e-128 463.8 319 71.8
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.6e-128 463.4 321 71.0
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 4.7e-128 461.8 321 71.0
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 6.1e-128 461.5 318 72.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 6.1e-128 461.5 318 71.4
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 8.0e-128 461.1 303 76.6
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.4e-127 460.3 316 73.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.4e-127 460.3 319 71.2
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.3e-127 459.5 325 70.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 5.2e-127 458.4 322 70.5
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 5.2e-127 458.4 317 71.3
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 8.9e-127 457.6 317 71.6
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.5e-126 456.8 318 75.5
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 5.7e-126 454.9 320 70.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-125 453.8 363 66.1
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.7e-125 453.4 318 71.4
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 6.4e-125 451.4 303 73.3
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 5.4e-124 448.4 337 70.0
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 9.2e-124 447.6 303 71.9
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.6e-123 446.8 338 67.8
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.6e-123 446.8 303 71.6
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 2.0e-123 446.4 307 71.3
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.9e-123 444.9 303 71.6
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 7.8e-123 444.5 297 73.7
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.6e-121 438.3 304 71.1
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.8e-120 436.0 314 68.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.7e-120 435.3 318 67.3
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 5.2e-119 431.8 317 67.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 6.8e-119 431.4 312 70.2
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 2.9e-117 426.0 269 78.1
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 4.1e-116 422.2 318 69.8
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 5.6e-113 411.8 298 69.8
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 6.2e-112 408.3 318 67.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 3.1e-111 406.0 339 65.2
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.6e-110 402.9 303 67.3
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 8.3e-109 397.9 291 69.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 2.8e-104 382.9 316 63.3
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 5.2e-103 378.6 315 64.1
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.3e-98 363.2 270 70.0
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.3e-98 363.2 270 70.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.3e-98 363.2 252 73.8
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.6e-96 357.1 248 70.2
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.4e-95 353.2 234 73.5
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.1e-92 344.4 322 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.4e-92 342.0 315 53.0
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 4.6e-91 339.0 319 56.1
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 4.6e-91 339.0 255 68.6
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.2e-84 315.8 315 49.2
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.3e-84 314.7 315 49.5
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 2.7e-83 313.2 215 72.6
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.3e-81 305.8 210 70.5
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 8.4e-77 291.6 181 79.6
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 3.2e-76 289.7 359 49.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 4.2e-76 289.3 194 72.7
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 3.0e-74 283.1 234 61.5
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 9.6e-73 278.1 304 45.4
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 8.4e-69 265.0 268 51.9
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.9e-60 237.3 146 77.4
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.9e-57 227.3 341 39.9
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 4.8e-48 196.1 228 49.1
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 3.1e-47 193.4 144 68.1
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 4.2e-44 183.0 129 68.2
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 7.7e-38 162.2 247 40.1
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.4e-31 141.4 103 68.9
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.2e-25 121.7 93 62.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 8.3e-24 115.5 88 64.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 4.1e-23 113.2 70 80.0
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.6e-22 111.3 187 37.4
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.6e-11 74.7 72 55.6
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 9.2e-07 58.9 61 49.2
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 2.7e-06 57.4 44 54.5


User provided reference genes

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