Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 2.2e-167 592.4 338 100.0
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 1.3e-100 370.5 312 65.1
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 1.7e-100 370.2 318 64.8
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.7e-100 370.2 315 69.2
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 5.1e-100 368.6 324 64.2
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 6.6e-100 368.2 316 71.2
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 8.9e-97 357.8 332 66.3
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 3.4e-96 355.9 323 65.3
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.5e-91 340.5 300 64.7
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 1.5e-91 340.5 321 62.9
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 9.6e-91 337.8 320 60.0
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 1.2e-90 337.4 321 59.5
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 4.7e-90 335.5 317 60.6
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.1e-89 334.3 318 61.0
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 8.9e-89 331.3 324 58.0
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 8.9e-89 331.3 326 64.4
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.6e-88 329.7 326 59.8
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 9.9e-88 327.8 310 59.7
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 1.3e-87 327.4 305 62.3
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.7e-87 327.0 303 62.7
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 2.9e-87 326.2 320 60.3
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 3.8e-87 325.9 318 60.1
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 6.4e-87 325.1 316 59.8
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 8.4e-87 324.7 262 67.6
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 4.2e-86 322.4 323 58.2
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 7.1e-86 321.6 317 63.1
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 7.1e-86 321.6 323 58.2
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 1.2e-85 320.9 326 59.5
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 1.6e-85 320.5 254 74.8
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 2.7e-85 319.7 369 55.6
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 7.8e-85 318.2 311 58.5
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.0e-84 317.8 323 57.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 7.3e-83 311.6 254 68.1
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 7.3e-83 311.6 326 58.0
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 7.3e-83 311.6 309 58.6
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 2.1e-82 310.1 329 55.3
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 2.8e-82 309.7 323 57.9
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 2.8e-82 309.7 323 60.4
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 6.9e-81 305.1 242 68.2
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 6.9e-81 305.1 318 57.2
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 1.5e-80 303.9 250 65.2
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 5.8e-80 302.0 290 59.3
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 9.9e-80 301.2 311 59.8
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 9.9e-80 301.2 316 57.9
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.3e-79 300.8 311 59.5
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.9e-79 299.7 318 58.2
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 8.4e-79 298.1 250 63.6
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.1e-78 297.7 311 58.8
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 1.4e-78 297.4 317 56.5
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 2.4e-78 296.6 320 56.2
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 9.3e-78 294.7 307 59.6
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 1.2e-77 294.3 278 64.4
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 4.6e-77 292.4 257 61.9
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 5.1e-76 288.9 290 55.9
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.5e-75 287.3 313 52.4
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 2.5e-75 286.6 310 55.2
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 5.6e-75 285.4 251 60.6
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.1e-74 283.5 308 54.2
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 2.8e-74 283.1 292 55.5
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 3.7e-74 282.7 305 54.4
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 4.5e-72 275.8 324 52.2
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 9.9e-72 274.6 243 63.0
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 9.9e-72 274.6 267 57.7
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 1.3e-71 274.2 266 58.6
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 3.8e-71 272.7 302 53.6
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 4.9e-71 272.3 323 57.0
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 6.4e-71 271.9 325 56.6
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 6.4e-71 271.9 306 55.6
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 6.4e-71 271.9 307 53.1
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 4.2e-70 269.2 307 52.1
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 2.7e-69 266.5 325 54.2
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.3e-68 263.5 308 51.9
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 5.1e-68 262.3 249 61.4
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 8.7e-68 261.5 327 50.8
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 1.5e-67 260.8 336 48.2
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 3.3e-67 259.6 323 49.5
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 4.3e-67 259.2 310 52.3
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 4.3e-67 259.2 271 55.7
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.3e-66 257.7 252 57.5
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.1e-66 256.9 284 52.1
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 2.8e-66 256.5 318 48.7
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 2.8e-66 256.5 318 48.7
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 2.8e-66 256.5 318 48.7
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 3.7e-66 256.1 289 52.6
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.1e-65 254.6 318 48.7
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.4e-65 254.2 324 50.0
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 3.1e-65 253.1 313 49.8
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 5.3e-65 252.3 274 59.9
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 1.2e-64 251.1 319 49.2
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 2.6e-64 250.0 320 52.8
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.3e-63 247.7 281 53.7
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.3e-63 247.7 246 60.6
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.0e-60 238.0 318 46.9
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 1.6e-58 230.7 271 53.5
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 3.1e-57 226.5 274 54.0
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 2.2e-55 220.3 251 55.8
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.1e-54 218.0 262 53.4
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 2.3e-52 210.3 255 50.2
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 2.8e-50 203.4 273 54.6
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 1.8e-44 184.1 171 58.5
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 1.7e-42 177.6 248 50.0
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 2.2e-42 177.2 173 54.3
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 4.1e-41 172.9 275 42.5
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.0e-40 170.6 223 45.7
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 5.0e-39 166.0 189 55.0
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 9.4e-38 161.8 113 74.3
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 5.2e-36 156.0 196 52.0
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 7.0e-33 145.6 274 40.5
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.1e-30 138.3 271 35.8
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 1.4e-28 131.3 205 42.4
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 4.5e-24 116.3 124 54.0
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 4.7e-21 106.3 314 32.5
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 1.4e-20 104.8 168 41.1
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 4.0e-20 103.2 297 32.3
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.2e-19 101.7 156 37.2
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 2.6e-19 100.5 144 41.0
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 2.3e-15 87.4 136 43.4
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 1.0e-12 78.6 255 33.3
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 4.4e-11 73.2 58 58.6
QL09p045125 Quercus lobata HOM05D042224 ORTHO05D008439 1.6e-08 64.7 157 32.5
QL11p014218 Quercus lobata HOM05D042224 ORTHO05D008439 2.0e-08 64.3 157 31.8
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 2.3e-07 60.8 138 35.5


User provided reference genes

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