Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 9.2e-69 263.5 136 100.0
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.2e-56 221.1 130 89.2
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 3.1e-48 195.3 132 81.8
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 4.3e-26 121.7 121 55.4
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 2.9e-22 109.0 130 50.0
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 7.2e-21 104.4 130 49.2
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 1.4e-19 100.1 131 50.4
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 3.0e-19 99.0 109 53.2
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 1.1e-18 97.1 128 50.0
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 2.5e-18 95.9 128 50.0
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 5.7e-18 94.7 129 45.7
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 4.8e-17 91.7 119 47.9
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 6.3e-17 91.3 103 52.4
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 8.2e-17 90.9 73 67.1
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.1e-16 90.5 121 44.6
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.1e-16 90.5 132 44.7
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 1.8e-16 89.7 115 47.0
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 2.4e-16 89.4 114 50.0
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 3.1e-16 89.0 107 50.5
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 6.9e-16 87.8 83 57.8
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 9.1e-16 87.4 130 43.1
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 9.1e-16 87.4 112 49.1
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 9.1e-16 87.4 100 49.0
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 1.2e-15 87.0 137 43.8
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 1.2e-15 87.0 137 46.0
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 1.2e-15 87.0 112 50.0
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 1.5e-15 86.7 126 46.8
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 2.6e-15 85.9 137 48.2
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 4.5e-15 85.1 127 40.9
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 7.7e-15 84.3 87 48.3
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 7.7e-15 84.3 132 44.7
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.3e-14 83.6 82 56.1
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 1.3e-14 83.6 131 45.8
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.7e-14 83.2 90 51.1
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.7e-14 83.2 113 46.9
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 1.7e-14 83.2 120 44.2
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 2.9e-14 82.4 113 43.4
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.9e-14 82.4 127 40.9
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 2.9e-14 82.4 130 42.3
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 3.8e-14 82.0 92 52.2
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 6.5e-14 81.3 68 60.3
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 8.5e-14 80.9 112 47.3
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 1.1e-13 80.5 127 40.9
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 1.4e-13 80.1 129 41.1
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 4.2e-13 78.6 68 60.3
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 7.2e-13 77.8 88 50.0
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 7.2e-13 77.8 113 46.0
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 9.4e-13 77.4 113 46.0
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 9.4e-13 77.4 95 44.2
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 1.2e-12 77.0 70 50.0
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.2e-12 77.0 113 43.4
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 1.2e-12 77.0 80 56.2
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 2.1e-12 76.3 80 53.8
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 2.7e-12 75.9 82 51.2
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.7e-12 75.9 113 46.0
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 3.6e-12 75.5 124 40.3
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 4.7e-12 75.1 122 39.3
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 6.1e-12 74.7 68 55.9
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 6.1e-12 74.7 116 42.2
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 6.1e-12 74.7 64 65.6
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 6.1e-12 74.7 64 65.6
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 6.1e-12 74.7 113 41.6
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 1.4e-11 73.6 113 43.4
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 1.8e-11 73.2 70 57.1
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 1.8e-11 73.2 83 53.0
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 2.3e-11 72.8 67 58.2
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 2.3e-11 72.8 85 48.2
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.9e-11 72.0 85 49.4
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 5.1e-11 71.6 113 37.2
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 6.7e-11 71.2 64 56.2
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 8.8e-11 70.9 108 40.7
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 8.8e-11 70.9 92 44.6
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 8.8e-11 70.9 115 46.1
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 1.1e-10 70.5 76 50.0
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.5e-10 70.1 66 51.5
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 1.5e-10 70.1 76 50.0
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.6e-10 69.3 64 57.8
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 2.6e-10 69.3 64 54.7
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 3.3e-10 68.9 73 50.7
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 3.3e-10 68.9 85 48.2
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 4.4e-10 68.6 103 41.7
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 4.4e-10 68.6 113 40.7
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 4.4e-10 68.6 63 57.1
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 7.4e-10 67.8 135 35.6
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 9.7e-10 67.4 85 47.1
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 1.3e-09 67.0 107 39.3
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 1.3e-09 67.0 103 40.8
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 1.3e-09 67.0 107 39.3
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 1.3e-09 67.0 68 51.5
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 1.7e-09 66.6 82 46.3
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 2.8e-09 65.9 103 39.8
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 3.7e-09 65.5 76 46.1
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 3.7e-09 65.5 63 55.6
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 3.7e-09 65.5 123 34.1
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 4.8e-09 65.1 62 51.6
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 6.3e-09 64.7 83 47.0
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 8.2e-09 64.3 84 47.6
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 8.2e-09 64.3 76 46.1
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.8e-08 63.2 113 41.6
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 1.8e-08 63.2 60 53.3
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.8e-08 63.2 82 45.1
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 3.1e-08 62.4 62 56.5
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 3.1e-08 62.4 82 43.9
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 5.3e-08 61.6 81 45.7
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 7.0e-08 61.2 60 53.3
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 9.1e-08 60.8 133 33.8
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 1.5e-07 60.1 104 35.6
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 2.0e-07 59.7 58 53.4
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 2.6e-07 59.3 63 49.2
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 5.9e-07 58.2 82 45.1
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 1.7e-06 56.6 55 54.5


User provided reference genes

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