Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 3.1e-226 788.1 397 100.0
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 1.9e-194 682.6 416 82.7
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 5.1e-192 674.5 416 81.0
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 5.6e-191 671.0 416 80.5
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 2.8e-190 668.7 413 79.9
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 4.7e-190 667.9 416 80.3
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 2.4e-189 665.6 416 79.8
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 4.0e-189 664.8 416 79.1
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 5.2e-189 664.5 416 80.0
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 6.8e-189 664.1 416 79.8
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 8.9e-189 663.7 414 80.2
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 8.9e-189 663.7 416 78.8
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 1.2e-188 663.3 416 79.6
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 1.2e-188 663.3 416 79.8
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 1.2e-188 663.3 416 78.6
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 1.5e-188 662.9 416 79.3
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 2.0e-188 662.5 416 78.8
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 2.0e-188 662.5 414 79.7
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 2.6e-188 662.1 415 79.3
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 3.4e-188 661.8 416 78.8
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 5.8e-188 661.0 416 78.6
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 7.6e-188 660.6 416 78.6
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 7.6e-188 660.6 416 79.3
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 7.6e-188 660.6 416 78.8
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 1.3e-187 659.8 416 79.3
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 1.3e-187 659.8 415 79.8
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.7e-187 659.4 416 79.1
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 2.9e-187 658.7 416 79.1
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 3.8e-187 658.3 416 79.1
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 1.4e-186 656.4 413 78.7
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 1.9e-186 656.0 405 81.0
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 4.2e-186 654.8 416 77.9
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 4.2e-186 654.8 416 77.6
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 5.4e-186 654.4 416 78.4
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 5.4e-186 654.4 416 78.6
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 1.6e-185 652.9 416 78.4
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 2.1e-185 652.5 416 78.1
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 2.7e-185 652.1 414 78.3
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.7e-185 652.1 416 78.6
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 3.5e-185 651.7 416 77.6
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 3.5e-185 651.7 416 77.9
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.6e-185 651.4 416 78.8
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.6e-185 651.4 416 78.6
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 4.6e-185 651.4 416 77.4
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 6.0e-185 651.0 416 78.6
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 1.0e-184 650.2 416 77.4
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 1.7e-184 649.4 412 78.4
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 1.7e-184 649.4 416 77.2
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 3.9e-184 648.3 416 76.7
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 8.7e-184 647.1 414 78.5
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.7e-184 647.1 414 78.7
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 1.1e-183 646.7 416 78.1
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 1.5e-183 646.4 416 78.1
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 1.5e-183 646.4 416 78.1
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 1.5e-183 646.4 416 78.1
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 1.5e-183 646.4 416 76.7
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.5e-183 645.6 413 77.5
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.5e-183 645.6 416 77.9
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.5e-183 645.6 417 77.7
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 2.5e-183 645.6 416 77.9
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.3e-183 645.2 416 77.4
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 5.6e-183 644.4 416 77.2
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 9.6e-183 643.7 417 78.2
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 1.6e-182 642.9 416 77.2
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 1.6e-182 642.9 416 77.2
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 1.6e-182 642.9 416 77.2
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.8e-182 642.1 430 76.3
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 3.6e-182 641.7 412 77.2
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 4.7e-182 641.3 416 76.4
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 4.7e-182 641.3 413 77.0
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 4.7e-182 641.3 416 77.2
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 1.1e-181 640.2 416 76.2
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 1.4e-181 639.8 416 77.4
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.4e-181 639.8 417 77.0
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 2.4e-181 639.0 416 77.4
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 3.1e-181 638.6 415 77.1
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 5.3e-181 637.9 416 75.5
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 9.0e-181 637.1 440 74.1
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 1.5e-180 636.3 413 75.1
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 2.0e-180 636.0 416 76.9
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.4e-180 635.2 416 76.7
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 7.6e-180 634.0 416 76.7
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 9.9e-180 633.6 416 75.5
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 1.4e-178 629.8 429 75.1
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 3.2e-178 628.6 413 77.0
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 3.2e-178 628.6 416 76.2
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 9.3e-178 627.1 412 76.2
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 6.0e-177 624.4 416 75.2
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 1.3e-176 623.2 462 70.6
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 1.9e-175 619.4 420 72.1
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.6e-174 615.1 416 73.6
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 4.8e-174 614.8 413 73.8
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 1.1e-173 613.6 416 73.3
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 4.0e-173 611.7 413 73.4
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 1.5e-172 609.8 413 73.1
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 2.6e-172 609.0 416 72.8
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 9.9e-172 607.1 413 72.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.2e-171 605.9 385 76.4
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 8.4e-171 604.0 413 72.2
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.4e-170 601.3 414 72.2
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 3.0e-168 595.5 416 74.3
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 2.5e-167 592.4 416 73.8
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 1.1e-165 587.0 416 69.7
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 1.8e-165 586.3 416 70.9
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 3.1e-165 585.5 416 72.8
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 7.6e-164 580.9 416 71.9
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.3e-163 580.1 417 71.7
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 1.7e-163 579.7 414 71.7
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.1e-162 577.0 424 71.5
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 1.4e-162 576.6 416 68.3
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 1.9e-162 576.2 416 68.3
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 2.5e-162 575.9 413 71.9
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 9.3e-162 573.9 416 71.6
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 9.3e-162 573.9 611 52.9
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 2.8e-158 562.4 433 68.6
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.7e-158 562.0 412 68.7
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 3.7e-158 562.0 415 69.6
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-157 560.5 406 69.2
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.8e-157 559.7 413 69.5
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 5.3e-157 558.1 413 67.6
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 9.0e-157 557.4 353 78.5
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 1.2e-156 557.0 401 72.8
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 2.2e-155 552.7 416 65.6
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 7.1e-154 547.7 410 67.6
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.8e-152 543.1 466 63.5
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.3e-151 538.5 412 66.7
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 5.7e-151 538.1 355 75.2
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 1.3e-150 537.0 410 67.6
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 4.5e-148 528.5 430 64.0
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 3.6e-145 518.8 422 64.2
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.4e-144 516.9 348 75.9
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 1.3e-142 510.4 407 61.4
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 1.1e-141 507.3 331 76.4
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 1.4e-141 506.9 331 77.6
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.1e-141 505.8 413 62.5
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 7.7e-140 501.1 335 73.1
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 3.2e-138 495.7 288 85.1
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.5e-138 495.0 377 66.3
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 1.0e-136 490.7 415 63.1
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 2.8e-134 482.6 312 77.6
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.4e-133 479.6 281 82.2
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 5.3e-125 451.8 414 55.8
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.8e-120 434.5 402 59.5
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 1.8e-117 426.8 294 73.1
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.6e-113 413.7 425 53.4
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 4.7e-113 412.1 435 53.6
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 8.0e-113 411.4 237 82.3
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 5.9e-100 368.6 425 47.5
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 1.5e-90 337.4 427 44.3
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 9.5e-90 334.7 252 67.1
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 3.0e-83 313.2 171 87.1
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.2e-81 307.8 465 41.1
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 1.7e-67 260.8 409 37.2
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.1e-64 251.5 217 60.8
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 4.9e-62 242.7 199 64.3
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 1.1e-50 204.9 165 64.8
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 3.4e-47 193.4 166 62.0
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 1.4e-45 188.0 146 63.7
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.1e-40 171.8 232 47.0
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 2.0e-39 167.5 158 60.8
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 6.1e-36 156.0 161 51.6
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 2.0e-31 141.0 86 80.2
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 1.8e-27 127.9 126 57.9
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 8.8e-27 125.6 219 36.1
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.2e-23 115.2 72 77.8
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 5.5e-21 106.3 75 72.0
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 2.7e-20 104.0 146 43.2
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 4.7e-20 103.2 131 46.6
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 6.7e-19 99.4 58 79.3
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 2.0e-18 97.8 55 81.8
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 1.7e-17 94.7 95 54.7
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 2.9e-14 84.0 55 65.5
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 6.5e-14 82.8 230 29.1
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 1.9e-13 81.3 86 53.5
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 2.1e-12 77.8 48 79.2
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 2.2e-09 67.8 95 44.2
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 2.8e-09 67.4 55 58.2
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 4.8e-09 66.6 47 70.2
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 3.1e-08 63.9 38 78.9
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 5.3e-08 63.2 50 58.0
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 5.3e-08 63.2 32 84.4
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 2.6e-07 60.8 38 63.2
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 5.0e-06 56.6 30 76.7


User provided reference genes

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