Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0393 Trochodendron aralioides HOM05D001186 ORTHO05D000971 5.3e-66 254.2 129 100.0
TAR629G3519 Trochodendron aralioides HOM05D001186 ORTHO05D000971 5.9e-65 250.8 129 98.4
TAR371G0320 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.9e-47 192.6 130 76.2
Aqoxy3G00278 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 1.0e-37 160.2 142 60.6
QL01p041163 Quercus lobata HOM05D001186 ORTHO05D000971 1.7e-32 142.9 131 58.8
Aqoxy5G03540 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 4.2e-31 138.3 129 55.8
MBI09_g40766_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 5.5e-31 137.9 131 58.8
QL10p025510 Quercus lobata HOM05D001186 ORTHO05D000971 1.0e-29 133.7 135 53.3
Nn4g23866 Nelumbo nucifera HOM05D001186 ORTHO05D000971 2.2e-27 125.9 135 54.1
Potri.010G123700 Populus trichocarpa HOM05D001186 ORTHO05D000971 1.1e-26 123.6 146 51.4
MBI16_g32670_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 1.8e-26 122.9 125 56.8
Haze_17495 Corylus avellana HOM05D001186 ORTHO05D000971 2.0e-25 119.4 149 49.0
Manes.14G103400 Manihot esculenta HOM05D001186 ORTHO05D000971 4.5e-25 118.2 133 52.6
CiPaw.15G086400 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.3e-24 116.7 137 51.8
Duzib268G0437 Durio zibethinus HOM05D001186 ORTHO05D000971 2.3e-24 115.9 144 49.3
Thecc.02G227800 Theobroma cacao HOM05D001186 ORTHO05D000971 1.9e-23 112.8 144 49.3
Gohir.D08G105100 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.6e-22 109.8 139 50.4
Dinv28111 Davidia involucrata HOM05D001186 ORTHO05D000971 3.6e-22 108.6 140 50.7
Gohir.A08G093800 Gossypium hirsutum HOM05D001186 ORTHO05D000971 3.6e-22 108.6 139 49.6
Gorai.004G112000 Gossypium raimondii HOM05D001186 ORTHO05D000971 3.6e-22 108.6 139 49.6
Haze_18687 Corylus avellana HOM05D001186 ORTHO05D000971 4.7e-22 108.2 135 50.4
Sabra10G0093700 Salix brachista HOM05D001186 ORTHO05D000971 1.2e-20 103.6 148 46.6
MSTRG.847 Avicennia marina HOM05D001186 ORTHO05D000971 1.5e-20 103.2 135 46.7
Hma1.2p1_0061F.1_g033760 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 2.0e-20 102.8 124 49.2
Dinv31630 Davidia involucrata HOM05D001186 ORTHO05D000971 5.7e-20 101.3 112 55.4
MD16G1041600 Malus domestica HOM05D001186 ORTHO05D000971 2.9e-19 99.0 170 42.9
DCAR_023208 Daucus carota HOM05D001186 ORTHO05D000971 6.4e-19 97.8 141 44.7
Manes.01G010900 Manihot esculenta HOM05D001186 ORTHO05D000971 8.3e-19 97.4 138 44.2
COL.COLO4_07638 Corchorus olitorius HOM05D001186 ORTHO05D000971 1.4e-18 96.7 135 43.7
Hma1.2p1_0653F.1_g196240 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 4.1e-18 95.1 145 42.8
Duzib205G0230 Durio zibethinus HOM05D001186 ORTHO05D000971 1.2e-17 93.6 139 44.6
Cfa019761 Carpinus fangiana HOM05D001186 ORTHO05D000971 1.6e-17 93.2 135 49.6
Lsat_1_v5_gn_8_40921 Lactuca sativa HOM05D001186 ORTHO05D000971 1.3e-16 90.1 134 43.3
Sed0003786 Sechium edule HOM05D001186 ORTHO05D000971 1.5e-15 86.7 144 43.8
Duzib084G0272 Durio zibethinus HOM05D001186 ORTHO05D000971 3.3e-15 85.5 138 43.5
ATR1125G102 Amborella trichopoda HOM05D001186 ORTHO05D000971 4.3e-15 85.1 140 43.6
CSS0012233 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.2e-14 83.6 134 45.5
Nitab4.5_0000489g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.6e-14 83.2 129 42.6
Lj2g0004597 Lotus japonicus HOM05D001186 ORTHO05D000971 3.6e-14 82.0 151 42.4
COL.COLO4_32831 Corchorus olitorius HOM05D001186 ORTHO05D000971 4.7e-14 81.6 86 50.0
Prupe.1G312500 Prunus persica HOM05D001186 ORTHO05D000971 1.4e-13 80.1 180 38.3
Sabra12G0039700 Salix brachista HOM05D001186 ORTHO05D000971 1.8e-13 79.7 131 45.0
Ciclev10023791m.g Citrus clementina HOM05D001186 ORTHO05D000971 2.3e-13 79.3 145 42.1
RcHm_v2.0_Chr4g0435011 Rosa chinensis HOM05D001186 ORTHO05D000971 2.3e-13 79.3 171 40.4
Cpa.g.c35103 Carica papaya HOM05D001186 ORTHO05D000971 6.8e-13 77.8 151 39.7
Ciclev10023693m.g Citrus clementina HOM05D001186 ORTHO05D000971 6.8e-13 77.8 145 41.4
Manes.06G067000 Manihot esculenta HOM05D001186 ORTHO05D000971 1.2e-12 77.0 130 43.8
Cc11_g10020 Coffea canephora HOM05D001186 ORTHO05D000971 2.0e-12 76.3 132 40.9
Cpa.g.c39771 Carica papaya HOM05D001186 ORTHO05D000971 2.6e-12 75.9 135 42.2
CiPaw.15G086500 Carya illinoinensis HOM05D001186 ORTHO05D000971 2.6e-12 75.9 113 46.0
Potri.012G055900 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.4e-12 75.5 132 42.4
Glyma.07G092500 Glycine max HOM05D001186 ORTHO05D000971 4.4e-12 75.1 148 37.8
Thecc.03G036500 Theobroma cacao HOM05D001186 ORTHO05D000971 4.4e-12 75.1 150 37.3
Eucgr.G02312 Eucalyptus grandis HOM05D001186 ORTHO05D000971 5.8e-12 74.7 132 43.2
Gorai.009G347500 Gossypium raimondii HOM05D001186 ORTHO05D000971 5.8e-12 74.7 130 42.3
FvH4_4g27220 Fragaria vesca HOM05D001186 ORTHO05D000971 7.5e-12 74.3 165 38.8
Dinv21073 Davidia involucrata HOM05D001186 ORTHO05D000971 9.8e-12 73.9 94 53.2
Lalb_Chr22g0353121 Lupinus albus HOM05D001186 ORTHO05D000971 9.8e-12 73.9 150 38.7
PGR119G2222 Punica granatum HOM05D001186 ORTHO05D000971 9.8e-12 73.9 130 40.8
FAN12G0246 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.3e-11 73.6 165 38.2
FAN12G0708 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.3e-11 73.6 165 38.2
Gohir.D05G323700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.2e-11 72.8 129 41.1
Potri.008G121650 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.7e-11 72.0 65 56.9
Gohir.A05G321500 Gossypium hirsutum HOM05D001186 ORTHO05D000971 4.9e-11 71.6 129 41.1
FAN22G0160 Fragaria x ananassa HOM05D001186 ORTHO05D000971 6.4e-11 71.2 166 39.2
CSS0032299 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.1e-10 70.5 104 45.2
Cpa.g.sc3.505 Carica papaya HOM05D001186 ORTHO05D000971 1.1e-10 70.5 151 39.1
DCAR_026737 Daucus carota HOM05D001186 ORTHO05D000971 3.2e-10 68.9 131 41.2
Rhsim09G0107000 Rhododendron simsii HOM05D001186 ORTHO05D000971 4.1e-10 68.6 130 39.2
FAN07G0491 Fragaria x ananassa HOM05D001186 ORTHO05D000971 5.4e-10 68.2 163 38.0
ECA233G1982 Erigeron canadensis HOM05D001186 ORTHO05D000971 7.0e-10 67.8 138 40.6
CSS0040830 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 9.2e-10 67.4 145 35.2
SalBow8G5321 Salvia bowleyana HOM05D001186 ORTHO05D000971 9.2e-10 67.4 129 38.0
CiPaw.16G065400 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.2e-09 67.0 130 41.5
CiPaw.15G131400 Carya illinoinensis HOM05D001186 ORTHO05D000971 3.5e-09 65.5 69 52.2
Atru.chr11.114 Acer truncatum HOM05D001186 ORTHO05D000971 6.0e-09 64.7 132 39.4
FAN17G0570 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.3e-08 63.5 166 37.3
Lsat_1_v5_gn_2_14741 Lactuca sativa HOM05D001186 ORTHO05D000971 2.3e-08 62.8 143 38.5
Ca_11163_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 3.9e-08 62.0 148 37.2
Potri.015G046600 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.9e-08 62.0 116 44.0
CANSAT01G1945 Cannabis sativa HOM05D001186 ORTHO05D000971 1.1e-07 60.5 62 56.5
Lalb_Chr04g0254691 Lupinus albus HOM05D001186 ORTHO05D000971 4.3e-07 58.5 136 36.0
Medtr1g110570 Medicago truncatula HOM05D001186 ORTHO05D000971 4.3e-07 58.5 143 37.8
Oeu008243.1 Olea europaea HOM05D001186 ORTHO05D000971 4.3e-07 58.5 135 35.6
Cpa.g.sc1.29 Carica papaya HOM05D001186 ORTHO05D000971 5.6e-07 58.2 50 54.0
Glyma.10G273300 Glycine max HOM05D001186 ORTHO05D000971 7.3e-07 57.8 130 38.5
HanXRQChr12g0364621 Helianthus annuus HOM05D001186 ORTHO05D000971 7.3e-07 57.8 132 37.1
HanXRQChr12g0364631 Helianthus annuus HOM05D001186 ORTHO05D000971 7.3e-07 57.8 133 41.4
Oeu034232.1 Olea europaea HOM05D001186 ORTHO05D000971 7.3e-07 57.8 130 36.9
unitig_22.g6558 Utricularia gibba HOM05D001186 ORTHO05D000971 9.5e-07 57.4 92 43.5
Dinv15684 Davidia involucrata HOM05D012236 ORTHO05D001602 1.2e-06 57.0 68 54.4
Migut.L01057 Erythranthe guttata HOM05D001186 ORTHO05D000971 1.2e-06 57.0 135 34.8
Psat6g226600 Pisum sativum HOM05D001186 ORTHO05D000971 4.7e-06 55.1 137 34.3


User provided reference genes

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