Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0377 Trochodendron aralioides HOM05D005538 ORTHO05D007055 1.3e-116 422.9 200 100.0
TAR371G0765 Trochodendron aralioides HOM05D005538 ORTHO05D007055 7.9e-77 290.8 153 85.6
TAR622G0886 Trochodendron aralioides HOM05D005538 ORTHO05D007055 6.9e-73 277.7 153 82.4
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 3.6e-69 265.4 153 77.8
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 6.1e-69 264.6 153 78.4
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 4.4e-67 258.5 153 74.5
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 2.8e-66 255.8 152 74.3
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 2.4e-65 252.7 152 73.7
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 3.1e-65 252.3 153 73.9
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 5.3e-65 251.5 153 75.2
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 2.6e-64 249.2 153 74.5
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 4.5e-64 248.4 153 73.9
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 6.5e-63 244.6 153 73.2
Potri.003G165900 Populus trichocarpa HOM05D005538 ORTHO05D007055 6.5e-63 244.6 153 71.9
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 8.5e-63 244.2 152 71.7
Potri.001G061900 Populus trichocarpa HOM05D005538 ORTHO05D007055 1.1e-62 243.8 153 70.6
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 1.9e-62 243.0 157 70.1
Lj3A1076T34 Lonicera japonica HOM05D005538 ORTHO05D007055 1.9e-62 243.0 166 68.7
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 1.9e-62 243.0 153 73.2
Sabra03G0121100 Salix brachista HOM05D005538 ORTHO05D007055 1.9e-62 243.0 153 71.2
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 7.2e-62 241.1 150 72.0
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 1.6e-61 240.0 159 69.2
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 1.6e-61 240.0 153 68.6
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 1.0e-60 237.3 153 70.6
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 1.8e-60 236.5 153 71.2
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 2.3e-60 236.1 153 70.6
CiPaw.06G107500 Carya illinoinensis HOM05D005538 ORTHO05D007055 3.0e-60 235.7 153 70.6
Aqoxy3G01758 Aquilegia oxysepala HOM05D005538 ORTHO05D007055 6.7e-60 234.6 158 69.0
Ah.03g135760 Amaranthus hybridus HOM05D005538 ORTHO05D007055 1.2e-59 233.8 150 67.3
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 1.5e-59 233.4 154 70.1
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 1.5e-59 233.4 154 70.1
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 3.3e-59 232.3 153 66.7
GSVIVG01000954001 Vitis vinifera HOM05D005538 ORTHO05D007055 3.3e-59 232.3 144 74.3
MELO3C022346.2 Cucumis melo HOM05D005538 ORTHO05D007055 4.4e-59 231.9 153 67.3
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 4.4e-59 231.9 153 66.7
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 5.7e-59 231.5 153 69.3
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 5.7e-59 231.5 151 69.5
CsaV3_6G007860 Cucumis sativus L. HOM05D005538 ORTHO05D007055 9.7e-59 230.7 153 67.3
QL03p050357 Quercus lobata HOM05D005538 ORTHO05D007055 9.7e-59 230.7 122 82.0
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 1.3e-58 230.3 153 68.6
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.3e-58 230.3 159 67.9
EL10Ac6g13582 Beta vulgaris HOM05D005538 ORTHO05D007055 1.7e-58 229.9 161 64.6
ClCG06G001820 Citrullus lanatus HOM05D005538 ORTHO05D007055 1.7e-58 229.9 153 69.3
Ciclev10033047m.g Citrus clementina HOM05D005538 ORTHO05D007055 2.2e-58 229.6 153 68.6
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 2.2e-58 229.6 153 69.3
HanXRQChr17g0540491 Helianthus annuus HOM05D005538 ORTHO05D007055 4.8e-58 228.4 152 68.4
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 6.3e-58 228.0 153 68.6
Cc11_g17450 Coffea canephora HOM05D005538 ORTHO05D007055 1.8e-57 226.5 128 77.3
AUR62028865 Chenopodium quinoa HOM05D005538 ORTHO05D007055 3.1e-57 225.7 165 62.4
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 3.1e-57 225.7 146 69.2
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 3.1e-57 225.7 146 67.8
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 4.1e-57 225.3 153 66.7
Phvul.008G000500 Phaseolus vulgaris HOM05D005538 ORTHO05D007055 9.1e-57 224.2 150 68.0
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 9.1e-57 224.2 153 67.3
Sed0021477 Sechium edule HOM05D005538 ORTHO05D007055 1.2e-56 223.8 153 66.7
MSTRG.469 Avicennia marina HOM05D005538 ORTHO05D007055 3.5e-56 222.2 169 60.4
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 4.5e-56 221.9 153 64.7
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 4.5e-56 221.9 153 67.3
Glyma.08G360100 Glycine max HOM05D005538 ORTHO05D007055 7.7e-56 221.1 148 67.6
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 7.7e-56 221.1 153 65.4
VMungo1383G2546 Vigna mungo HOM05D005538 ORTHO05D007055 1.0e-55 220.7 150 68.0
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 1.7e-55 219.9 153 64.7
Duzib248G0674 Durio zibethinus HOM05D005538 ORTHO05D007055 1.7e-55 219.9 153 66.0
Glyma.18G301900 Glycine max HOM05D005538 ORTHO05D007055 1.7e-55 219.9 151 68.9
Gohir.A03G151200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.7e-55 219.9 153 65.4
Gohir.D02G174200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.7e-55 219.9 153 65.4
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.7e-55 219.9 153 64.7
Gorai.005G195900 Gossypium raimondii HOM05D005538 ORTHO05D007055 1.7e-55 219.9 153 65.4
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 2.2e-55 219.5 157 63.7
ECA246G0794 Erigeron canadensis HOM05D005538 ORTHO05D007055 2.2e-55 219.5 158 63.9
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 6.5e-55 218.0 154 66.9
Ah.02g131140 Amaranthus hybridus HOM05D005538 ORTHO05D007055 1.1e-54 217.2 154 64.9
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 2.5e-54 216.1 151 64.2
THA.LOC104825475 Tarenaya hassleriana HOM05D005538 ORTHO05D007055 9.4e-54 214.2 153 64.1
A02p01730 Brassica napus HOM05D005538 ORTHO05D007055 1.4e-52 210.3 153 61.4
BraA02t05152Z Brassica rapa HOM05D005538 ORTHO05D007055 1.4e-52 210.3 153 61.4
MD16G1126800 Malus domestica HOM05D005538 ORTHO05D007055 1.8e-52 209.9 153 63.4
C02p05970 Brassica napus HOM05D005538 ORTHO05D007055 4.0e-52 208.8 153 61.4
BolC2t06540H Brassica oleracea HOM05D005538 ORTHO05D007055 4.0e-52 208.8 153 61.4
Rhsim12G0021000 Rhododendron simsii HOM05D005538 ORTHO05D007055 6.8e-52 208.0 158 61.4
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 8.8e-52 207.6 182 54.9
BraA10t44563Z Brassica rapa HOM05D005538 ORTHO05D007055 1.5e-51 206.8 153 60.1
BcaNung01169 Brassica carinata HOM05D005538 ORTHO05D007055 2.0e-51 206.5 153 60.8
A10p25020 Brassica napus HOM05D005538 ORTHO05D007055 2.0e-51 206.5 154 60.4
C09p63880 Brassica napus HOM05D005538 ORTHO05D007055 3.4e-51 205.7 154 60.4
BolC9t59228H Brassica oleracea HOM05D005538 ORTHO05D007055 3.4e-51 205.7 154 60.4
Thhalv10014995m.g Eutrema salsugineum HOM05D005538 ORTHO05D007055 3.4e-51 205.7 153 60.1
Gohir.D01G019700 Gossypium hirsutum HOM05D005538 ORTHO05D007055 3.4e-51 205.7 151 64.2
Ca_06515_v3 Cicer arietinum L. HOM05D005538 ORTHO05D007055 4.4e-51 205.3 121 71.9
Gorai.002G022100 Gossypium raimondii HOM05D005538 ORTHO05D007055 5.7e-51 204.9 151 64.2
AT5G13190 Arabidopsis thaliana HOM05D005538 ORTHO05D007055 9.8e-51 204.1 153 60.1
Sp6g30790 Schrenkiella parvula HOM05D005538 ORTHO05D007055 9.8e-51 204.1 153 60.1
Gohir.A01G021300 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.3e-50 203.8 153 62.7
Carub.0006s1136 Capsella rubella HOM05D005538 ORTHO05D007055 2.2e-50 203.0 153 59.5
Medtr7g005440 Medicago truncatula HOM05D005538 ORTHO05D007055 2.2e-50 203.0 118 72.0
TPR.G15629 Trifolium pratense HOM05D005538 ORTHO05D007055 2.2e-50 203.0 121 74.4
AL6G23800 Arabidopsis lyrata HOM05D005538 ORTHO05D007055 3.7e-50 202.2 153 59.5
Psat3g208320 Pisum sativum HOM05D005538 ORTHO05D007055 3.7e-50 202.2 118 72.9
Lj1g0020005 Lotus japonicus HOM05D005538 ORTHO05D007055 8.3e-50 201.1 112 78.6
Aa31LG3G14470 Aethionema arabicum HOM05D005538 ORTHO05D007055 3.5e-48 195.7 153 58.8
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 5.9e-48 194.9 148 60.1
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.0e-47 194.1 151 58.9
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.7e-47 193.4 148 60.1
CARHR200280 Cardamine hirsuta HOM05D005538 ORTHO05D007055 3.8e-47 192.2 153 58.2
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 6.5e-47 191.4 150 58.7
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 9.5e-46 187.6 144 59.7
Sc04g0010460 Simmondsia chinensis HOM05D005538 ORTHO05D007055 2.8e-45 186.0 129 66.7
Hund28220 Selenicereus undatus HOM05D005538 ORTHO05D007055 8.0e-45 184.5 148 57.4
Hund28225 Selenicereus undatus HOM05D005538 ORTHO05D007055 8.0e-45 184.5 148 57.4
Atru.chr11.2402 Acer truncatum HOM05D005538 ORTHO05D007055 1.7e-39 166.8 177 47.5
Zm00001eb241880 Zea mays HOM05D005538 ORTHO05D007055 8.6e-39 164.5 187 46.0
SMO271G0002 Selaginella moellendorffii HOM05D005538 ORTHO05D007055 1.5e-38 163.7 125 56.0
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis HOM05D005538 ORTHO05D007055 5.8e-35 151.8 119 54.6
Pp3c26_1170 Physcomitrium patens HOM05D005538 ORTHO05D007055 9.8e-35 151.0 157 48.4
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 1.7e-34 150.2 135 52.6
CBR_g4442 Chara braunii HOM05D005538 ORTHO05D007055 2.9e-34 149.4 146 46.6
TWI75G1796 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 3.5e-32 142.5 86 72.1
AagrBONN_evm.TU.Sc2ySwM_117.1282 Anthoceros agrestis HOM05D005538 ORTHO05D007055 1.2e-29 134.0 144 45.8
HPP92_011548 Vanilla planifolia HOM05D005538 ORTHO05D007055 4.7e-29 132.1 72 77.8
TAR629G2749 Trochodendron aralioides HOM05D005538 ORTHO05D007055 4.9e-26 122.1 84 69.0
Oeu039177.1 Olea europaea HOM05D005538 ORTHO05D007055 6.4e-26 121.7 59 86.4
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 2.4e-25 119.8 83 68.7
Cpa.g.sc123.51 Carica papaya HOM05D005538 ORTHO05D007055 7.0e-25 118.2 58 84.5
TAR623G1654 Trochodendron aralioides HOM05D005538 ORTHO05D007055 8.6e-23 111.3 83 65.1
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 5.6e-22 108.6 128 47.7
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 1.1e-20 104.4 68 69.1
SalBow8G4168 Salvia bowleyana HOM05D005538 ORTHO05D007055 3.4e-19 99.4 81 54.3
Hma1.2p1_0365F.1_g136780 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 4.4e-19 99.0 76 64.5
Lsat_1_v5_gn_6_34980 Lactuca sativa HOM05D005538 ORTHO05D007055 4.1e-17 92.4 113 43.4
RcHm_v2.0_Chr4g0404941 Rosa chinensis HOM05D005538 ORTHO05D007055 1.1e-14 84.3 105 43.8
SalBow8G3396 Salvia bowleyana HOM05D018271 ORTHO05D007055 2.0e-11 73.6 60 55.0
DCAR_028448 Daucus carota HOM05D005538 ORTHO05D007055 1.2e-08 64.3 40 65.0
SEGI_18844 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 2.1e-08 63.5 57 49.1
RcHm_v2.0_Chr1g0337501 Rosa chinensis HOM05D005538 ORTHO05D007055 3.5e-08 62.8 94 37.2
BcaB01g05369 Brassica carinata HOM05D005538 ORTHO05D007055 6.0e-08 62.0 120 30.8
SEGI_11247 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 1.7e-07 60.5 55 47.3
RcHm_v2.0_Chr5g0057011 Rosa chinensis HOM05D005538 ORTHO05D007055 3.0e-07 59.7 102 33.3
SEGI_29074 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 3.0e-07 59.7 54 48.1
SEGI_30741 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 3.0e-07 59.7 54 48.1
Hma1.2p1_1396F.1_g280590 Hydrangea macrophylla HOM05D005538 ORTHO05D228224 5.1e-07 58.9 72 47.2
SEGI_18352 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 5.1e-07 58.9 55 47.3


User provided reference genes

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