Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 4.2e-270 934.1 469 100.0
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.6e-221 772.7 445 85.4
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.1e-213 745.7 464 77.4
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.3e-210 736.5 467 75.4
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 3.9e-207 724.9 464 75.4
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 3.3e-206 721.8 464 76.1
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 1.6e-205 719.5 463 75.6
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 3.1e-204 715.3 467 73.4
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 3.1e-204 715.3 456 75.2
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 1.2e-203 713.4 467 73.9
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 3.4e-203 711.8 466 75.8
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 5.8e-203 711.1 464 75.0
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 5.4e-201 704.5 462 74.5
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 1.0e-199 700.3 464 72.6
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.5e-198 696.4 463 72.6
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 1.5e-198 696.4 461 75.7
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.5e-198 695.7 463 72.6
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 3.6e-197 691.8 462 72.5
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 3.6e-197 691.8 450 72.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 4.0e-196 688.3 533 66.8
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 1.5e-195 686.4 466 71.0
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 3.4e-195 685.3 461 72.9
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 2.2e-194 682.6 462 71.2
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 3.2e-193 678.7 450 72.9
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 2.1e-192 676.0 513 67.1
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 3.5e-192 675.2 450 74.0
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 3.5e-192 675.2 467 70.2
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 3.9e-191 671.8 457 72.0
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 3.9e-191 671.8 470 69.8
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.1e-190 670.2 458 72.7
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 3.1e-188 662.1 453 70.6
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 4.0e-188 661.8 457 71.3
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 5.2e-188 661.4 459 71.2
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.5e-187 659.8 462 68.6
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 2.6e-187 659.1 465 70.3
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.4e-187 658.7 455 72.5
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 4.4e-187 658.3 470 68.9
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 9.2e-185 650.6 557 61.0
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.1e-184 649.4 464 68.3
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.1e-184 649.4 455 71.2
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 4.6e-184 648.3 464 69.0
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.3e-183 646.7 457 69.6
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.7e-183 646.4 456 66.9
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 2.3e-183 646.0 449 69.0
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 2.3e-183 646.0 449 69.0
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 8.7e-183 644.0 456 67.3
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.5e-182 642.5 465 67.7
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.3e-182 642.1 468 67.9
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.3e-182 641.7 466 66.5
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 2.1e-181 639.4 465 67.5
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 2.8e-181 639.0 453 66.4
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.6e-179 632.5 456 66.4
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 5.8e-179 631.3 458 67.9
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 9.9e-179 630.6 464 67.9
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 1.7e-178 629.8 456 66.7
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 4.6e-176 621.7 454 66.3
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 1.7e-175 619.8 455 65.5
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 2.3e-175 619.4 454 65.6
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 8.7e-175 617.5 392 75.5
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 2.5e-174 615.9 447 67.6
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.3e-173 613.6 454 65.0
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 2.1e-173 612.8 454 66.3
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 3.1e-172 609.0 458 65.7
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 3.8e-170 602.1 425 68.7
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 3.2e-169 599.0 458 63.5
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 9.3e-169 597.4 454 64.1
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.7e-168 595.9 474 62.0
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.6e-168 595.1 452 64.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.6e-168 595.1 452 64.4
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 6.0e-168 594.7 435 69.0
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 3.0e-167 592.4 452 64.4
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 8.7e-167 590.9 452 63.3
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.1e-166 590.5 438 69.4
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.3e-166 588.6 452 63.3
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 9.6e-166 587.4 452 63.1
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.3e-165 587.0 396 71.5
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 2.8e-165 585.9 436 64.4
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 3.7e-165 585.5 430 67.0
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 8.1e-165 584.3 454 61.7
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 2.4e-164 582.8 454 61.7
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 3.1e-164 582.4 451 61.0
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 5.3e-164 581.6 454 61.5
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 5.3e-164 581.6 454 61.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.2e-163 580.5 476 60.3
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 9.9e-163 577.4 454 61.2
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.9e-161 573.2 391 71.4
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.3e-151 539.7 396 67.4
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 1.1e-150 537.3 474 59.1
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 2.2e-149 533.1 468 57.7
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 4.1e-148 528.9 391 65.0
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 2.3e-143 513.1 395 63.5
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.1e-136 490.0 458 55.7
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.8e-132 476.9 313 72.2
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 1.5e-131 473.8 474 53.6
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.5e-129 466.5 334 70.1
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 1.1e-124 451.1 399 55.1
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 9.4e-121 438.0 303 71.3
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 2.0e-118 430.3 310 69.0
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.3e-106 391.0 262 74.4
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.3e-106 391.0 262 74.4
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.0e-103 379.4 321 59.5
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 3.0e-90 336.7 456 41.4
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 1.2e-75 288.1 408 39.7
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 5.1e-74 282.7 208 70.2
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 3.6e-72 276.6 183 75.4
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 1.8e-71 274.2 215 65.6
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.2e-36 156.8 113 69.0
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.6e-27 128.3 97 64.9
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 5.1e-18 96.7 68 63.2
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 6.7e-18 96.3 68 63.2
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.6e-14 85.1 80 50.0
Glyma.16G096400 Glycine max HOM05D001723 ORTHO05D001706 4.5e-06 57.0 38 68.4


User provided reference genes

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