Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0363 Trochodendron aralioides HOM05D001447 ORTHO05D005061 2.3e-70 268.9 141 100.0
COL.COLO4_31349 Corchorus olitorius HOM05D001447 ORTHO05D005061 6.0e-63 244.2 141 90.1
Thecc.06G175800 Theobroma cacao HOM05D001447 ORTHO05D005061 6.0e-63 244.2 141 90.8
Gohir.A06G200700 Gossypium hirsutum HOM05D001447 ORTHO05D005061 7.8e-63 243.8 141 90.1
ClCG01G023530 Citrullus lanatus HOM05D001447 ORTHO05D005061 1.7e-62 242.7 141 90.1
CsaV3_6G050640 Cucumis sativus L. HOM05D001447 ORTHO05D005061 1.7e-62 242.7 141 90.1
arahy.Tifrunner.gnm1.ann1.8VV3Y6 Arachis hypogaea HOM05D001447 ORTHO05D005061 2.3e-62 242.3 141 90.1
Cpa.g.sc7.16 Carica papaya HOM05D001447 ORTHO05D005061 2.3e-62 242.3 141 90.8
Gohir.D10G031300 Gossypium hirsutum HOM05D001447 ORTHO05D005061 2.3e-62 242.3 141 90.1
MELO3C007233.2 Cucumis melo HOM05D001447 ORTHO05D005061 3.0e-62 241.9 141 90.1
Dinv40648 Davidia involucrata HOM05D001447 ORTHO05D005061 3.0e-62 241.9 141 90.1
Actinidia07629 Actinidia chinensis HOM05D001447 ORTHO05D005061 5.1e-62 241.1 141 89.4
Gohir.A10G030400 Gossypium hirsutum HOM05D001447 ORTHO05D005061 6.6e-62 240.7 141 89.4
Gorai.011G032900 Gossypium raimondii HOM05D001447 ORTHO05D005061 6.6e-62 240.7 141 89.4
CSS0004540 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005061 8.7e-62 240.4 141 89.4
Gorai.010G242400 Gossypium raimondii HOM05D001447 ORTHO05D005061 8.7e-62 240.4 141 89.4
arahy.Tifrunner.gnm1.ann1.55WK8U Arachis hypogaea HOM05D001447 ORTHO05D005061 1.1e-61 240.0 141 89.4
Gohir.D06G208200 Gossypium hirsutum HOM05D001447 ORTHO05D005061 1.1e-61 240.0 141 89.4
CiPaw.09G067200 Carya illinoinensis HOM05D001447 ORTHO05D005061 1.5e-61 239.6 141 89.4
Sed0025458 Sechium edule HOM05D001447 ORTHO05D005061 1.5e-61 239.6 141 88.7
CAN.G168.8 Capsicum annuum HOM05D001447 ORTHO05D005061 2.5e-61 238.8 141 88.7
Dinv04637 Davidia involucrata HOM05D001447 ORTHO05D005061 2.5e-61 238.8 141 88.7
Dinv17393 Davidia involucrata HOM05D001447 ORTHO05D005061 2.5e-61 238.8 141 88.7
Glyma.07G204300 Glycine max HOM05D001447 ORTHO05D005061 2.5e-61 238.8 139 89.2
Manes.17G053100 Manihot esculenta HOM05D001447 ORTHO05D005061 2.5e-61 238.8 141 88.7
PGR004G1605 Punica granatum HOM05D001447 ORTHO05D005061 2.5e-61 238.8 141 87.9
PGR046G0002 Punica granatum HOM05D001447 ORTHO05D005061 2.5e-61 238.8 141 87.9
Duzib192G0898 Durio zibethinus HOM05D001447 ORTHO05D005061 4.3e-61 238.0 139 89.2
arahy.Tifrunner.gnm1.ann1.G5WY8I Arachis hypogaea HOM05D001447 ORTHO05D005061 5.6e-61 237.7 141 87.2
arahy.Tifrunner.gnm1.ann1.V1EAJK Arachis hypogaea HOM05D001447 ORTHO05D005061 7.3e-61 237.3 141 87.2
HanXRQChr17g0556041 Helianthus annuus HOM05D001447 ORTHO05D005061 9.6e-61 236.9 141 87.2
Potri.011G063400 Populus trichocarpa HOM05D001447 ORTHO05D005061 9.6e-61 236.9 141 87.9
ATR1098G051 Amborella trichopoda HOM05D001447 ORTHO05D005061 1.3e-60 236.5 141 86.5
VMungo0540G1497 Vigna mungo HOM05D001447 ORTHO05D005061 1.3e-60 236.5 141 87.9
Sed0013081 Sechium edule HOM05D001447 ORTHO05D005061 1.6e-60 236.1 141 88.7
Ciclev10015348m.g Citrus clementina HOM05D001447 ORTHO05D005061 2.1e-60 235.7 141 87.2
Eucgr.D00551 Eucalyptus grandis HOM05D001447 ORTHO05D005061 2.1e-60 235.7 141 85.8
Glyma.13G171800 Glycine max HOM05D001447 ORTHO05D005061 2.1e-60 235.7 139 87.8
Glyma.13G232500 Glycine max HOM05D001447 ORTHO05D005061 2.8e-60 235.3 141 87.2
Cfa000573 Carpinus fangiana HOM05D001447 ORTHO05D005061 3.6e-60 235.0 141 87.9
ECA234G2254 Erigeron canadensis HOM05D001447 ORTHO05D005061 3.6e-60 235.0 141 85.8
Prupe.4G057500 Prunus persica HOM05D001447 ORTHO05D005061 3.6e-60 235.0 141 87.9
Ca_26047_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005061 6.2e-60 234.2 141 85.8
Haze_06277 Corylus avellana HOM05D001447 ORTHO05D005061 6.2e-60 234.2 141 87.2
Glyma.15G080200 Glycine max HOM05D001447 ORTHO05D005061 6.2e-60 234.2 141 87.2
Lalb_Chr09g0327961 Lupinus albus HOM05D001447 ORTHO05D005061 6.2e-60 234.2 141 85.8
Nn4g22114 Nelumbo nucifera HOM05D001447 ORTHO05D005061 6.2e-60 234.2 141 87.2
Oeu043095.1 Olea europaea HOM05D001447 ORTHO05D005061 6.2e-60 234.2 141 86.5
CiPaw.10G056900 Carya illinoinensis HOM05D001447 ORTHO05D005061 8.1e-60 233.8 141 86.5
Nitab4.5_0006237g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005061 8.1e-60 233.8 141 85.8
Sopen10g004510 Solanum pennellii HOM05D001447 ORTHO05D005061 8.1e-60 233.8 141 86.5
Cc07_g18500 Coffea canephora HOM05D001447 ORTHO05D005061 1.1e-59 233.4 141 86.5
FAN21G0087 Fragaria x ananassa HOM05D001447 ORTHO05D005061 1.1e-59 233.4 141 85.8
FAN25G0670 Fragaria x ananassa HOM05D001447 ORTHO05D005061 1.1e-59 233.4 141 85.8
Medtr2g015390 Medicago truncatula HOM05D001447 ORTHO05D005061 1.1e-59 233.4 141 85.8
TWI38G2261 Tripterygium wilfordii HOM05D001447 ORTHO05D005061 1.1e-59 233.4 141 85.8
Lj1A1196T40 Lonicera japonica HOM05D001447 ORTHO05D005061 1.4e-59 233.0 141 85.1
Zm00001eb407780 Zea mays HOM05D001447 ORTHO05D005061 1.4e-59 233.0 141 86.5
MSTRG.7388 Avicennia marina HOM05D001447 ORTHO05D005061 1.8e-59 232.6 141 83.7
AUR62031140 Chenopodium quinoa HOM05D001447 ORTHO05D005061 1.8e-59 232.6 141 85.8
AUR62036545 Chenopodium quinoa HOM05D001447 ORTHO05D005061 1.8e-59 232.6 141 85.8
Atru.chr10.1729 Acer truncatum HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.8
FvH4_3g08130 Fragaria vesca HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.1
FAN11G0520 Fragaria x ananassa HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.1
FAN16G1600 Fragaria x ananassa HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.1
Potri.004G053400 Populus trichocarpa HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.8
Solyc10g008740.3 Solanum lycopersicum HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.8
PGSC0003DMG400026627 Solanum tuberosum HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.8
SGA_v2.0_scaffold1G00008 Striga asiatica HOM05D001447 ORTHO05D005061 2.4e-59 232.3 141 85.8
Lsat_1_v5_gn_4_50480 Lactuca sativa HOM05D001447 ORTHO05D005061 3.1e-59 231.9 141 85.1
MD10G1284000 Malus domestica HOM05D001447 ORTHO05D005061 3.1e-59 231.9 141 86.5
Os03g0563300 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005061 3.1e-59 231.9 141 85.1
Phvul.006G178400 Phaseolus vulgaris HOM05D001447 ORTHO05D005061 3.1e-59 231.9 141 85.1
TPR.G16264 Trifolium pratense HOM05D001447 ORTHO05D005061 3.1e-59 231.9 141 85.1
TWI63G0441 Tripterygium wilfordii HOM05D001447 ORTHO05D005061 3.1e-59 231.9 141 84.4
CANSAT35G0876 Cannabis sativa HOM05D001447 ORTHO05D005061 4.0e-59 231.5 141 84.4
Rhsim02G0140300 Rhododendron simsii HOM05D001447 ORTHO05D005061 4.0e-59 231.5 141 85.8
Aa31LG9G6980 Aethionema arabicum HOM05D001447 ORTHO05D005061 5.3e-59 231.1 141 84.4
Medtr4g087895 Medicago truncatula HOM05D001447 ORTHO05D005061 5.3e-59 231.1 141 85.1
HanXRQChr11g0327161 Helianthus annuus HOM05D001447 ORTHO05D005061 6.9e-59 230.7 141 84.4
MBI06_g31399_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005061 6.9e-59 230.7 138 88.4
Psat1g200160 Pisum sativum HOM05D001447 ORTHO05D005061 6.9e-59 230.7 141 84.4
Sabra04G0034800 Salix brachista HOM05D001447 ORTHO05D005061 6.9e-59 230.7 141 86.5
Ah.09g237830 Amaranthus hybridus HOM05D001447 ORTHO05D005061 9.0e-59 230.3 141 85.8
RcHm_v2.0_Chr5g0010061 Rosa chinensis HOM05D001447 ORTHO05D005061 9.0e-59 230.3 141 84.4
Aqoxy4G00488 Aquilegia oxysepala HOM05D001447 ORTHO05D005061 1.2e-58 229.9 141 85.8
CDE08G0265 Ceratophyllum demersum HOM05D001447 ORTHO05D005061 1.2e-58 229.9 141 85.1
MSTRG.16140 Avicennia marina HOM05D001447 ORTHO05D005061 1.5e-58 229.6 141 85.8
DCAR_004025 Daucus carota HOM05D001447 ORTHO05D005061 1.5e-58 229.6 141 85.8
Hma1.2p1_0155F.1_g068420 Hydrangea macrophylla HOM05D001447 ORTHO05D005061 1.5e-58 229.6 141 85.8
Lalb_Chr18g0059221 Lupinus albus HOM05D001447 ORTHO05D005061 2.0e-58 229.2 141 85.8
SalBow8G5070 Salvia bowleyana HOM05D001447 ORTHO05D005061 2.0e-58 229.2 141 84.4
vmacro15960 Vaccinium macrocarpon HOM05D001447 ORTHO05D005061 2.6e-58 228.8 141 84.4
Lj6g0004465 Lotus japonicus HOM05D001447 ORTHO05D005061 3.4e-58 228.4 141 83.7
THA.LOC104806148 Tarenaya hassleriana HOM05D001447 ORTHO05D005061 3.4e-58 228.4 141 83.0
CARHR225320 Cardamine hirsuta HOM05D001447 ORTHO05D005061 4.5e-58 228.0 141 83.7
MD05G1304900 Malus domestica HOM05D001447 ORTHO05D005061 4.5e-58 228.0 141 85.1
TPR.G11795 Trifolium pratense HOM05D001447 ORTHO05D005061 4.5e-58 228.0 141 83.7
Sc17g0005810 Simmondsia chinensis HOM05D001447 ORTHO05D005061 5.8e-58 227.6 138 84.8
Migut.M01066 Erythranthe guttata HOM05D001447 ORTHO05D005061 7.6e-58 227.3 141 83.0
PSO063G0490 Papaver somniferum HOM05D001447 ORTHO05D005061 7.6e-58 227.3 141 83.0
Psat7g118680 Pisum sativum HOM05D001447 ORTHO05D005061 7.6e-58 227.3 139 82.7
HPP92_008742 Vanilla planifolia HOM05D001447 ORTHO05D005061 7.6e-58 227.3 141 83.7
BcaC06g30582 Brassica carinata HOM05D001447 ORTHO05D005061 9.9e-58 226.9 141 83.7
BraA03t14213Z Brassica rapa HOM05D001447 ORTHO05D005061 9.9e-58 226.9 141 84.4
Carub.0008s0199 Capsella rubella HOM05D001447 ORTHO05D005061 9.9e-58 226.9 141 83.0
PSO782G2058 Papaver somniferum HOM05D001447 ORTHO05D005061 9.9e-58 226.9 141 83.0
EL10Ac8g20486 Beta vulgaris HOM05D001447 ORTHO05D005061 1.3e-57 226.5 137 86.9
Manes.16G035500 Manihot esculenta HOM05D001447 ORTHO05D005061 1.3e-57 226.5 141 84.4
Thhalv10025291m.g Eutrema salsugineum HOM05D001447 ORTHO05D005061 1.7e-57 226.1 141 83.0
HanXRQChr06g0176621 Helianthus annuus HOM05D001447 ORTHO05D005061 1.7e-57 226.1 141 84.4
BcaNung02708 Brassica carinata HOM05D001447 ORTHO05D005061 2.2e-57 225.7 141 83.7
C07p49730 Brassica napus HOM05D001447 ORTHO05D005061 2.2e-57 225.7 141 83.7
BolC7t45474H Brassica oleracea HOM05D001447 ORTHO05D005061 2.2e-57 225.7 141 83.7
AT4G18480 Arabidopsis thaliana HOM05D001447 ORTHO05D005061 2.9e-57 225.3 141 82.3
A03p51320 Brassica napus HOM05D001447 ORTHO05D005061 2.9e-57 225.3 141 83.7
BcaNung05872 Brassica carinata HOM05D001447 ORTHO05D005061 4.9e-57 224.6 141 82.3
C01p12430 Brassica napus HOM05D001447 ORTHO05D005061 4.9e-57 224.6 141 82.3
CDE02G2237 Ceratophyllum demersum HOM05D001447 ORTHO05D000215 4.9e-57 224.6 137 85.4
Thhalv10000878m.g Eutrema salsugineum HOM05D001447 ORTHO05D005061 4.9e-57 224.6 141 82.3
Ca_00416_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005061 8.4e-57 223.8 141 82.3
BcaC09g51503 Brassica carinata HOM05D001447 ORTHO05D005061 1.1e-56 223.4 141 81.6
A01p10450 Brassica napus HOM05D001447 ORTHO05D005061 1.1e-56 223.4 141 81.6
BolC1t01217H Brassica oleracea HOM05D001447 ORTHO05D005061 1.1e-56 223.4 141 81.6
BraA01t00991Z Brassica rapa HOM05D001447 ORTHO05D005061 1.1e-56 223.4 141 81.6
VMungo0251G0134 Vigna mungo HOM05D001447 ORTHO05D005061 1.1e-56 223.4 139 84.2
Aa31LG6G1230 Aethionema arabicum HOM05D001447 ORTHO05D005061 1.4e-56 223.0 141 81.6
AL7G35800 Arabidopsis lyrata HOM05D001447 ORTHO05D005061 3.2e-56 221.9 141 80.9
Carub.0007s2275 Capsella rubella HOM05D001447 ORTHO05D005061 3.2e-56 221.9 141 80.9
GSVIVG01021169001 Vitis vinifera HOM05D001447 ORTHO05D005061 5.4e-56 221.1 130 90.0
BcaC03g16800 Brassica carinata HOM05D001447 ORTHO05D005061 7.1e-56 220.7 141 80.9
A02p29450 Brassica napus HOM05D001447 ORTHO05D005061 7.1e-56 220.7 141 80.9
BolC2t10724H Brassica oleracea HOM05D001447 ORTHO05D005061 7.1e-56 220.7 141 80.9
BraA02t07972Z Brassica rapa HOM05D001447 ORTHO05D005061 7.1e-56 220.7 141 80.9
AL8G12600 Arabidopsis lyrata HOM05D001447 ORTHO05D005061 9.3e-56 220.3 141 80.1
Phvul.003G057600 Phaseolus vulgaris HOM05D001447 ORTHO05D005061 9.3e-56 220.3 139 83.5
Sp7g15540 Schrenkiella parvula HOM05D001447 ORTHO05D005061 9.3e-56 220.3 141 80.9
THA.LOC104814243 Tarenaya hassleriana HOM05D001447 ORTHO05D005061 1.6e-55 219.5 141 79.4
CARHR176000 Cardamine hirsuta HOM05D001447 ORTHO05D005061 4.6e-55 218.0 141 80.9
AT5G45930 Arabidopsis thaliana HOM05D001447 ORTHO05D005061 6.0e-55 217.6 141 78.7
C02p46720 Brassica napus HOM05D001447 ORTHO05D005061 3.0e-54 215.3 141 79.4
Nitab4.5_0005897g0020 Nicotiana tabacum HOM05D001447 ORTHO05D005061 8.7e-54 213.8 134 82.8
AagrBONN_evm.TU.Sc2ySwM_117.1378 Anthoceros agrestis HOM05D001447 ORTHO05D005061 5.3e-51 204.5 139 76.3
Peaxi162Scf00269g00514 Petunia axillaris HOM05D001447 ORTHO05D005061 1.2e-50 203.4 125 84.8
Mapoly0040s0099 Marchantia polymorpha HOM05D001447 ORTHO05D005061 7.6e-50 200.7 139 74.8
Pp3c10_2940 Physcomitrium patens HOM05D001447 ORTHO05D005061 3.3e-45 185.3 139 67.6
Pp3c2_15490 Physcomitrium patens HOM05D001447 ORTHO05D005061 7.4e-45 184.1 139 66.9
Cre06.g306300 Chlamydomonas reinhardtii HOM05D001447 ORTHO05D005061 1.6e-36 156.4 139 58.3
MCO01G614 Micromonas commoda HOM05D001447 ORTHO05D005061 4.1e-35 151.8 139 56.1
Cre12.g510800 Chlamydomonas reinhardtii HOM05D001447 ORTHO05D005061 9.1e-27 124.0 131 49.6
MCO06G110 Micromonas commoda HOM05D001447 ORTHO05D005061 3.4e-26 122.1 140 46.4
PRCOL_00004252 Prasinoderma coloniale HOM05D001447 ORTHO05D005061 6.5e-25 117.9 135 46.7
Psat1g200320 Pisum sativum HOM05D001447 ORTHO05D005061 8.5e-25 117.5 109 61.5
QL05p044197 Quercus lobata HOM05D001447 ORTHO05D005061 7.4e-21 104.4 62 90.3
SMO356G0325 Selaginella moellendorffii HOM05D001447 ORTHO05D005061 7.4e-21 104.4 83 67.5
Oeu062333.1 Olea europaea HOM05D001447 ORTHO05D005061 7.2e-08 61.2 42 81.0
CSS0001499 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005061 3.6e-07 58.9 40 70.0


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