Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.7e-128 462.6 229 100.0
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.1e-109 400.2 229 84.3
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.3e-102 376.7 228 80.7
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.1e-102 375.9 219 83.6
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 3.7e-102 375.2 231 78.8
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 2.4e-101 372.5 231 80.1
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 5.3e-101 371.3 234 78.6
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 5.3e-101 371.3 226 80.1
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.2e-100 370.2 231 80.1
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 3.4e-100 368.6 231 78.4
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.0e-99 367.1 228 76.8
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 2.2e-99 365.9 218 80.7
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.2e-99 365.9 229 77.7
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 6.5e-99 364.4 239 74.1
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.5e-99 364.4 229 77.7
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.1e-98 363.6 218 79.8
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.9e-98 362.8 230 77.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.2e-98 362.1 233 76.8
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 4.2e-98 361.7 225 77.8
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 5.5e-98 361.3 225 77.8
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.1e-98 360.9 229 76.9
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.2e-97 360.1 229 76.4
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.5e-97 358.6 233 76.0
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 3.5e-97 358.6 222 77.5
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.5e-97 358.6 225 79.6
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 4.6e-97 358.2 223 77.6
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 7.9e-97 357.5 235 74.9
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-96 356.7 233 75.5
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-96 356.7 229 76.0
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.8e-96 356.3 229 76.4
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.3e-96 355.9 227 74.9
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.9e-96 355.1 227 75.8
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 6.7e-96 354.4 227 77.1
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 6.7e-96 354.4 221 77.4
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 8.7e-96 354.0 218 77.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.7e-96 354.0 220 76.8
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.1e-95 353.6 230 76.1
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.5e-95 353.2 222 76.6
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 2.5e-95 352.4 228 74.1
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 2.5e-95 352.4 230 75.2
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 9.7e-95 350.5 222 76.1
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.3e-94 350.1 230 74.8
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.6e-94 349.7 229 74.2
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.8e-94 349.0 228 74.1
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.4e-93 346.7 233 73.0
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.4e-93 345.9 217 77.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 3.1e-93 345.5 221 75.6
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.1e-93 345.5 220 75.0
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.1e-93 345.1 217 77.4
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.9e-93 344.4 227 73.6
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 9.0e-93 344.0 221 76.5
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.2e-92 343.6 217 77.4
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 5.9e-92 341.3 233 72.1
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 5.9e-92 341.3 225 72.9
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.7e-91 339.7 301 61.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 3.8e-91 338.6 239 69.9
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 6.5e-91 337.8 226 72.6
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.4e-90 336.7 226 72.1
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.5e-90 335.9 209 77.0
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 3.2e-90 335.5 231 69.3
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 5.5e-90 334.7 230 71.3
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-90 334.3 218 74.8
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.2e-89 333.6 228 71.5
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.6e-89 333.2 233 71.7
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.1e-89 332.8 218 75.2
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 3.6e-89 332.0 242 69.4
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.6e-89 332.0 233 71.2
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.4e-88 330.1 236 71.2
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.0e-88 328.9 221 75.1
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 6.7e-88 327.8 237 71.7
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 8.8e-88 327.4 229 71.6
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 8.8e-88 327.4 225 71.1
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 2.5e-87 325.9 226 71.7
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 7.4e-87 324.3 231 65.4
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 2.2e-86 322.8 199 78.4
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.8e-86 322.4 227 69.6
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 3.7e-86 322.0 232 66.8
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 4.8e-86 321.6 237 67.9
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 6.3e-86 321.2 230 69.1
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.1e-85 320.5 231 68.8
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 5.3e-85 318.2 231 67.5
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 2.0e-84 316.2 233 67.0
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.0e-84 316.2 233 67.0
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.0e-84 316.2 233 67.0
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 2.0e-84 316.2 224 69.6
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 2.6e-84 315.8 228 68.9
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 3.4e-84 315.5 225 68.9
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 4.5e-84 315.1 202 77.7
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.0e-83 313.9 235 65.5
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.0e-83 313.9 235 65.5
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.0e-83 313.9 200 75.5
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.3e-83 313.5 211 71.6
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.1e-82 310.5 195 79.0
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 4.2e-82 308.5 207 72.5
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 5.5e-82 308.1 235 64.7
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 7.2e-82 307.8 222 68.9
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 7.2e-82 307.8 207 71.0
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 9.4e-82 307.4 227 66.1
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.2e-81 307.0 224 66.1
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 7.9e-81 304.3 206 72.8
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 3.3e-79 298.9 191 75.4
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.0e-75 287.3 200 70.5
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.0e-75 287.3 196 69.4
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 2.5e-74 282.7 178 77.0
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 4.4e-71 271.9 239 59.0
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.2e-70 269.6 203 67.5
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 2.9e-67 259.2 192 68.8
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 3.0e-64 249.2 220 54.1
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.5e-63 246.9 236 54.7
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.8e-62 242.7 250 55.6
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.5e-58 230.3 144 76.4
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.5e-58 230.3 176 61.9
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 1.8e-56 223.4 203 56.7
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.8e-56 223.4 141 77.3
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 8.8e-56 221.1 218 51.8
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.3e-54 217.2 193 56.5
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.8e-54 215.3 127 80.3
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 7.3e-34 148.3 184 44.6
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.9e-27 125.9 82 74.4
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 5.6e-26 122.1 206 37.9
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.2e-25 120.9 253 33.6
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 6.4e-22 108.6 184 39.7
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 4.1e-21 105.9 202 35.1
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 3.4e-15 86.3 48 81.2
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 6.4e-14 82.0 61 63.9
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.1e-13 81.3 48 77.1
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.0e-08 62.8 34 79.4
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 2.0e-07 60.5 222 27.9
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 8.4e-06 55.1 209 22.5


User provided reference genes

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