Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.6e-109 399.4 204 100.0
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 7.1e-89 330.9 205 82.9
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 7.8e-88 327.4 206 80.6
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 7.8e-88 327.4 205 82.0
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.1e-86 323.6 205 79.5
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.9e-86 322.8 205 80.0
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 1.9e-86 322.8 205 82.0
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 9.5e-86 320.5 204 80.9
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.6e-85 318.5 205 80.5
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 3.6e-85 318.5 205 80.5
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 3.6e-85 318.5 205 79.5
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 8.1e-85 317.4 205 80.0
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 5.2e-84 314.7 205 79.5
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.2e-83 313.5 204 78.9
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.5e-83 313.2 206 77.2
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.5e-83 313.2 205 79.0
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.0e-83 312.8 191 82.7
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 5.8e-83 311.2 205 78.0
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 9.9e-83 310.5 205 75.1
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 2.2e-82 309.3 204 77.9
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 3.7e-82 308.5 205 76.6
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 6.4e-82 307.8 205 78.0
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 8.4e-82 307.4 208 76.9
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 8.4e-82 307.4 204 77.9
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 4.1e-81 305.1 222 74.3
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 4.1e-81 305.1 203 78.3
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 5.4e-81 304.7 203 76.8
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 7.1e-81 304.3 207 77.8
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 7.1e-81 304.3 205 76.6
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 7.1e-81 304.3 205 77.1
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 7.1e-81 304.3 187 82.9
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 9.2e-81 303.9 205 77.6
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 9.2e-81 303.9 205 76.1
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 1.2e-80 303.5 204 76.0
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.6e-80 303.1 205 76.1
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 2.7e-80 302.4 206 76.2
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 2.7e-80 302.4 205 76.1
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 3.5e-80 302.0 205 76.1
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 3.5e-80 302.0 192 79.7
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.6e-80 301.6 205 75.6
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 6.0e-80 301.2 205 76.1
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.8e-80 300.8 205 75.1
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 7.8e-80 300.8 206 76.7
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.3e-79 300.1 207 75.8
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 1.7e-79 299.7 206 75.7
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 1.7e-79 299.7 187 80.2
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 2.3e-79 299.3 188 81.9
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 5.1e-79 298.1 205 74.6
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 6.6e-79 297.7 191 75.9
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 6.6e-79 297.7 205 75.6
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 8.6e-79 297.4 206 75.2
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.5e-78 296.6 194 78.9
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.9e-78 296.2 191 75.9
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 2.5e-78 295.8 204 74.0
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 2.5e-78 295.8 204 74.0
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 3.3e-78 295.4 191 78.5
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 3.3e-78 295.4 205 75.6
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.3e-78 295.0 205 73.7
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.3e-78 295.0 205 73.7
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.6e-77 293.1 206 72.8
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 2.1e-77 292.7 205 73.2
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 4.7e-77 291.6 201 73.1
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 8.1e-77 290.8 196 73.5
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.4e-76 290.0 206 73.8
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.4e-76 290.0 205 73.2
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 2.0e-75 286.2 205 71.7
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 2.0e-75 286.2 204 70.1
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 3.4e-75 285.4 205 72.2
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 4.4e-75 285.0 203 70.9
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 4.4e-75 285.0 203 72.4
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 5.8e-75 284.6 207 72.0
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 5.8e-75 284.6 196 75.0
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 7.6e-75 284.3 201 74.1
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 7.6e-75 284.3 205 72.2
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 9.9e-75 283.9 189 76.7
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 9.9e-75 283.9 192 74.5
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.3e-74 283.5 174 82.2
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.2e-74 282.7 205 71.7
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 4.9e-74 281.6 206 71.4
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 6.4e-74 281.2 205 71.7
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 8.4e-74 280.8 205 70.7
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 8.4e-74 280.8 226 67.7
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 1.4e-73 280.0 205 70.2
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 1.4e-73 280.0 205 70.2
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 1.4e-73 280.0 205 70.2
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.4e-73 280.0 205 72.2
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.9e-73 279.6 204 73.5
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 3.2e-73 278.9 228 67.5
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.6e-72 276.6 205 70.7
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 3.5e-72 275.4 190 73.7
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 6.0e-72 274.6 229 64.2
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 6.0e-72 274.6 205 70.2
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 7.8e-72 274.2 188 72.3
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 5.1e-71 271.6 200 70.5
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 8.7e-71 270.8 316 51.6
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.5e-70 270.0 205 69.3
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 5.8e-67 258.1 239 60.7
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.9e-65 253.1 161 80.1
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 9.6e-62 240.7 166 74.1
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.1e-60 237.3 203 63.1
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.3e-58 230.3 158 75.3
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.5e-56 222.2 135 85.9
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 5.6e-54 214.9 116 93.1
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 6.2e-53 211.5 132 78.8
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.2e-50 203.0 135 76.3
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 4.2e-49 198.7 106 89.6
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 1.6e-48 196.8 118 83.1
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 1.0e-47 194.1 152 64.5
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.9e-46 189.9 120 79.2
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 3.3e-46 189.1 134 76.1
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 4.5e-43 178.7 108 84.3
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 8.2e-37 157.9 148 60.1
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 2.7e-32 142.9 185 45.9
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.4e-31 140.6 156 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 3.9e-31 139.0 179 42.5
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 4.1e-28 129.0 138 49.3
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.5e-27 127.1 93 66.7
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 1.4e-25 120.6 206 38.3
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-24 117.5 135 48.9
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.7e-24 115.5 249 32.9
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 2.8e-21 106.3 175 40.0
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.7e-10 70.5 187 29.4
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 2.5e-09 66.6 100 41.0
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 1.6e-08 63.9 55 60.0
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 1.0e-07 61.2 39 69.2
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.0e-07 59.3 33 87.9
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-06 57.4 48 60.4


User provided reference genes

Program Settings