Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0267 Trochodendron aralioides HOM05D000874 ORTHO05D001267 8.8e-287 989.6 489 100.0
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 1.3e-160 570.5 490 63.5
TAR622G0856 Trochodendron aralioides HOM05D000874 ORTHO05D001267 1.8e-122 443.7 415 61.0
Nn4g23458 Nelumbo nucifera HOM05D000874 ORTHO05D001267 1.3e-112 411.0 476 52.5
GSVIVG01008114001 Vitis vinifera HOM05D000874 ORTHO05D001267 7.4e-76 288.9 484 40.1
Dinv17430 Davidia involucrata HOM05D000874 ORTHO05D001267 1.5e-68 264.6 481 40.3
CSS0023333 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 5.5e-63 246.1 470 37.7
CSS0039968 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 5.5e-63 246.1 470 37.7
Haze_07744 Corylus avellana HOM05D000874 ORTHO05D001267 1.4e-50 204.9 482 34.4
Aqoxy3G03671 Aquilegia oxysepala HOM05D000874 ORTHO05D001267 4.1e-50 203.4 491 33.8
QL10p019931 Quercus lobata HOM05D000874 ORTHO05D001267 3.4e-49 200.3 475 35.8
Actinidia04813 Actinidia chinensis HOM05D000874 ORTHO05D001267 1.0e-48 198.7 401 36.9
Nn3g17474 Nelumbo nucifera HOM05D000874 ORTHO05D001267 9.4e-47 192.2 314 43.6
Prupe.5G206700 Prunus persica HOM05D000874 ORTHO05D001267 1.0e-45 188.7 486 34.2
CiPaw.11G055300 Carya illinoinensis HOM05D000874 ORTHO05D001267 3.0e-45 187.2 462 35.1
RcHm_v2.0_Chr7g0183291 Rosa chinensis HOM05D000874 ORTHO05D001267 1.8e-42 177.9 502 33.3
MD14G1213100 Malus domestica HOM05D000874 ORTHO05D001267 3.5e-41 173.7 519 32.4
Actinidia16140 Actinidia chinensis HOM05D000874 ORTHO05D001267 3.2e-39 167.2 488 33.0
Glyma.04G160800 Glycine max HOM05D000874 ORTHO05D001267 4.8e-35 153.3 458 31.4
FvH4_5g13670 Fragaria vesca HOM05D000874 ORTHO05D001267 4.1e-34 150.2 494 31.6
Oeu017180.1 Olea europaea HOM05D000874 ORTHO05D001267 5.3e-34 149.8 477 32.9
Lj5A134T72 Lonicera japonica HOM05D000874 ORTHO05D001267 7.0e-34 149.4 481 31.4
FAN18G0264 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.2e-33 148.7 494 31.4
FAN08G0155 Fragaria x ananassa HOM05D000874 ORTHO05D001267 2.0e-33 147.9 491 31.6
FAN13G1125 Fragaria x ananassa HOM05D000874 ORTHO05D001049 3.5e-33 147.1 483 31.7
EL10Ac5g11157 Beta vulgaris HOM05D000874 ORTHO05D001267 1.3e-32 145.2 481 31.2
Glyma.06G204600 Glycine max HOM05D000874 ORTHO05D001267 1.3e-32 145.2 473 31.7
VMungo1309G3138 Vigna mungo HOM05D000874 ORTHO05D001267 2.9e-32 144.1 475 31.4
Actinidia35043 Actinidia chinensis HOM05D000874 ORTHO05D001267 1.1e-31 142.1 463 30.2
Phvul.009G202700 Phaseolus vulgaris HOM05D000874 ORTHO05D001267 3.2e-31 140.6 473 31.7
Manes.06G083000 Manihot esculenta HOM05D000874 ORTHO05D001267 5.5e-31 139.8 483 30.4
AUR62039650 Chenopodium quinoa HOM05D000874 ORTHO05D001267 1.0e-29 135.6 465 32.5
Thecc.03G104300 Theobroma cacao HOM05D000874 ORTHO05D001267 4.0e-29 133.7 469 30.7
Sc12g0007060 Simmondsia chinensis HOM05D000874 ORTHO05D001267 2.2e-27 127.9 440 29.8
AUR62021535 Chenopodium quinoa HOM05D000874 ORTHO05D001267 1.1e-26 125.6 464 30.2
Lj1g0025338 Lotus japonicus HOM05D000874 ORTHO05D001267 1.8e-26 124.8 485 30.5
Manes.14G086800 Manihot esculenta HOM05D000874 ORTHO05D001267 1.8e-26 124.8 496 30.0
CSS0036101 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 2.9e-24 117.5 196 45.9
Rhsim08G0144400 Rhododendron simsii HOM05D000874 ORTHO05D001267 3.8e-24 117.1 278 36.0
Hma1.2p1_0060F.1_g032960 Hydrangea macrophylla HOM05D000874 ORTHO05D001267 5.0e-24 116.7 449 30.1
Ciclev10018493m.g Citrus clementina HOM05D000874 ORTHO05D001267 1.1e-23 115.5 468 29.3
Duzib068G0415 Durio zibethinus HOM05D000874 ORTHO05D003941 2.1e-22 111.3 461 29.1
COL.COLO4_24322 Corchorus olitorius HOM05D000874 ORTHO05D001267 4.0e-21 107.1 429 29.8
vmacro17620 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 2.0e-20 104.8 245 36.7
Atru.chr9.526 Acer truncatum HOM05D000874 ORTHO05D001267 4.4e-20 103.6 285 34.0
Cc00_g03520 Coffea canephora HOM05D000874 ORTHO05D001267 4.4e-20 103.6 486 26.5
MSTRG.22953 Avicennia marina HOM05D000874 ORTHO05D001267 1.3e-19 102.1 244 35.7
TWI60G1583 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 1.1e-18 99.0 456 27.9
Lalb_Chr16g0391661 Lupinus albus HOM05D000874 ORTHO05D001267 1.3e-16 92.0 196 38.3
Lalb_Chr05g0229601 Lupinus albus HOM05D000874 ORTHO05D001267 2.9e-16 90.9 237 33.8
Peaxi162Scf00013g00075 Petunia axillaris HOM05D000874 ORTHO05D001267 1.5e-15 88.6 469 27.7
Potri.006G227200 Populus trichocarpa HOM05D000874 ORTHO05D001267 1.9e-15 88.2 218 35.8
CAN.G587.51 Capsicum annuum HOM05D000874 ORTHO05D000105 5.6e-15 86.7 218 34.9
Sopen06g026730 Solanum pennellii HOM05D000874 ORTHO05D001267 5.6e-15 86.7 219 37.0
Gohir.A03G070700 Gossypium hirsutum HOM05D000874 ORTHO05D001267 1.2e-14 85.5 454 27.1
AUR62039647 Chenopodium quinoa HOM05D000874 ORTHO05D001267 2.1e-14 84.7 285 33.7
TAR622G0252 Trochodendron aralioides HOM05D000874 ORTHO05D001267 6.1e-14 83.2 62 67.7
Ca_02921_v3 Cicer arietinum L. HOM05D000874 ORTHO05D001267 8.0e-14 82.8 293 32.4
Solyc06g069440.3 Solanum lycopersicum HOM05D000874 ORTHO05D001267 8.0e-14 82.8 219 36.5
Eucgr.B00614 Eucalyptus grandis HOM05D000874 ORTHO05D001267 2.3e-13 81.3 290 31.7
CsaV3_1G003050 Cucumis sativus L. HOM05D000874 ORTHO05D001267 3.0e-13 80.9 464 27.6
Nitab4.5_0007645g0020 Nicotiana tabacum HOM05D000874 ORTHO05D001267 3.0e-13 80.9 252 32.9
SalBow5G5238 Salvia bowleyana HOM05D000874 ORTHO05D001267 3.0e-13 80.9 250 33.6
vmacro16489 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 3.0e-13 80.9 447 26.4
Gohir.D03G097100 Gossypium hirsutum HOM05D000874 ORTHO05D001267 8.9e-13 79.3 395 28.1
Gorai.003G101900 Gossypium raimondii HOM05D000874 ORTHO05D001267 1.2e-12 79.0 392 28.6
Sabra06G0175800 Salix brachista HOM05D000874 ORTHO05D001267 1.5e-12 78.6 218 33.5
Sed0005310 Sechium edule HOM05D000874 ORTHO05D001267 1.5e-12 78.6 451 27.1
MELO3C017234.2 Cucumis melo HOM05D000874 ORTHO05D001267 2.6e-12 77.8 228 34.2
ClCG06G015550 Citrullus lanatus HOM05D000874 ORTHO05D001267 1.3e-11 75.5 451 26.6
Nitab4.5_0001328g0070 Nicotiana tabacum HOM05D000874 ORTHO05D001267 1.3e-11 75.5 400 28.5
Sabra18G0048000 Salix brachista HOM05D000874 ORTHO05D001267 2.2e-11 74.7 250 30.8
DCAR_023163 Daucus carota HOM05D000874 ORTHO05D001267 1.4e-10 72.0 463 24.4
CANSAT80G1925 Cannabis sativa HOM05D000874 ORTHO05D001267 1.8e-10 71.6 330 27.9
ATR0177G006 Amborella trichopoda HOM05D000874 ORTHO05D001267 3.2e-10 70.9 507 26.0
Psat4g051080 Pisum sativum HOM05D000874 ORTHO05D001267 7.0e-10 69.7 453 28.3
Medtr2g060650 Medicago truncatula HOM05D000874 ORTHO05D001267 1.6e-09 68.6 306 29.1
Potri.018G051900 Populus trichocarpa HOM05D000874 ORTHO05D001267 2.0e-09 68.2 227 30.8
PGSC0003DMG401004066 Solanum tuberosum HOM05D000874 ORTHO05D001267 3.5e-09 67.4 418 28.5
HPP92_007834 Vanilla planifolia HOM05D000874 ORTHO05D001267 4.6e-09 67.0 440 26.4
PGR083G2399 Punica granatum HOM05D000874 ORTHO05D001267 2.3e-08 64.7 263 29.3
Psat4g190920 Pisum sativum HOM05D000487 ORTHO05D001267 3.9e-08 63.9 182 33.5
arahy.Tifrunner.gnm1.ann1.A58RJ7 Arachis hypogaea HOM05D000874 ORTHO05D001267 1.1e-07 62.4 455 26.4
ECA246G3190 Erigeron canadensis HOM05D000874 ORTHO05D001267 1.2e-06 58.9 300 27.7
CDE08G0775 Ceratophyllum demersum HOM05D000874 ORTHO05D001267 2.8e-06 57.8 451 25.1
Os03g0214900 Oryza sativa ssp. japonica HOM05D000874 ORTHO05D001267 8.0e-06 56.2 273 25.6


User provided reference genes

Program Settings