Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.4e-151 539.7 287 100.0
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 3.4e-73 279.3 294 60.5
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 3.1e-66 256.1 301 53.5
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 2.0e-52 210.3 299 50.8
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 4.5e-49 199.1 302 43.4
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.3e-48 197.6 294 44.6
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 5.0e-48 195.7 306 47.7
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 3.2e-47 193.0 254 50.0
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 3.2e-47 193.0 304 46.7
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 3.6e-46 189.5 300 47.3
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 8.8e-45 184.9 308 44.8
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 1.1e-44 184.5 292 41.8
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 7.4e-44 181.8 306 43.5
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 4.1e-42 176.0 313 40.6
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 7.7e-41 171.8 260 44.6
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 1.3e-40 171.0 307 44.3
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 2.2e-40 170.2 304 43.8
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 2.9e-40 169.9 312 42.9
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 5.5e-39 165.6 260 40.4
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 5.5e-39 165.6 260 40.4
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 1.2e-38 164.5 289 38.8
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 2.7e-38 163.3 259 39.4
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 3.6e-38 162.9 318 43.7
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 8.0e-38 161.8 276 42.0
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 4.0e-37 159.5 261 42.9
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 1.2e-36 157.9 316 38.9
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 1.5e-36 157.5 292 38.7
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.6e-36 156.8 299 42.5
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 2.6e-36 156.8 289 42.9
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 5.7e-36 155.6 299 41.8
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.3e-35 154.5 298 39.3
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 1.7e-35 154.1 307 35.2
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.7e-35 152.9 299 39.8
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.7e-35 152.9 299 39.8
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.1e-34 151.4 299 41.8
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 1.8e-34 150.6 317 38.2
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 5.3e-34 149.1 314 37.6
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.3e-34 149.1 299 39.1
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 5.3e-34 149.1 269 43.5
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 7.0e-34 148.7 283 38.5
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 9.1e-34 148.3 265 42.3
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.6e-33 147.5 266 36.8
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 2.0e-33 147.1 306 38.9
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 2.0e-33 147.1 324 40.4
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 3.5e-33 146.4 262 39.3
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 4.5e-33 146.0 295 39.7
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.9e-33 145.6 295 39.7
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 7.7e-33 145.2 287 40.4
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 7.7e-33 145.2 293 42.3
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 1.7e-32 144.1 296 33.4
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 2.2e-32 143.7 309 40.8
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 4.2e-31 139.4 261 36.8
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 2.1e-30 137.1 277 39.0
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 1.4e-29 134.4 271 42.1
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 1.8e-29 134.0 266 37.6
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.0e-29 133.3 247 39.7
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 8.8e-29 131.7 304 37.5
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 1.2e-28 131.3 279 37.6
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 2.0e-28 130.6 280 37.1
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.0e-28 130.6 246 36.2
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.6e-28 130.2 246 36.2
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 3.4e-28 129.8 239 37.7
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.3e-27 127.9 301 40.9
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.7e-27 127.5 266 36.1
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 4.5e-25 119.4 277 37.5
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 7.7e-25 118.6 233 37.3
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 2.3e-24 117.1 297 34.3
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 2.3e-24 117.1 263 35.0
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 5.0e-24 115.9 284 35.9
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 8.6e-24 115.2 287 35.9
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 1.9e-23 114.0 270 34.1
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.9e-23 114.0 267 37.5
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 5.5e-23 112.5 259 40.2
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 1.6e-22 110.9 267 33.7
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 2.1e-22 110.5 264 35.2
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 2.8e-22 110.2 245 42.0
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 2.6e-20 103.6 229 35.4
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 4.4e-20 102.8 128 50.8
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 4.4e-20 102.8 268 38.1
CDE02G0206 Ceratophyllum demersum HOM05D056078 ORTHO05D007257 7.5e-20 102.1 289 33.9
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.4e-18 97.1 148 42.6
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 2.4e-18 97.1 270 33.0
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 5.4e-18 95.9 284 34.5
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 9.2e-18 95.1 252 36.5
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 9.2e-18 95.1 221 42.1
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 9.2e-18 95.1 290 30.3
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 1.2e-17 94.7 268 32.1
MBI04_g33415_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 2.0e-17 94.0 181 41.4
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 3.5e-17 93.2 240 37.5
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 4.5e-17 92.8 280 31.1
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 5.9e-17 92.4 261 32.6
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 7.8e-17 92.0 279 30.8
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 1.3e-16 91.3 307 27.0
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 1.7e-16 90.9 285 30.2
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 2.3e-16 90.5 297 29.6
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 2.9e-16 90.1 237 36.7
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 3.9e-16 89.7 243 37.4
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 5.0e-16 89.4 287 29.3
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 6.6e-16 89.0 268 31.3
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 6.6e-16 89.0 244 33.6
Nitab4.5_0000917g0050 Nicotiana tabacum HOM05D007199 ORTHO05D007257 6.6e-16 89.0 181 37.6
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 8.6e-16 88.6 280 31.1
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 1.1e-15 88.2 264 32.2
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.9e-15 87.4 270 31.1
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 2.5e-15 87.0 263 31.2
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 7.3e-15 85.5 296 29.7
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 1.2e-14 84.7 275 32.0
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 1.0e-13 81.6 257 30.7
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 3.1e-13 80.1 192 32.8
AUR62033124 Chenopodium quinoa HOM05D021513 ORTHO05D007257 5.2e-13 79.3 223 30.9
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 8.9e-13 78.6 309 25.6
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 1.2e-12 78.2 239 30.5
EL10Ac1g00217 Beta vulgaris HOM05D021513 ORTHO05D007257 2.6e-12 77.0 306 27.8
EL10Ac7g17504 Beta vulgaris HOM05D021513 ORTHO05D007257 2.6e-12 77.0 229 35.8
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 2.6e-12 77.0 275 30.9
HanXRQChr16g0524641 Helianthus annuus HOM05D007199 ORTHO05D007257 4.4e-12 76.3 266 32.0
DCAR_006984 Daucus carota HOM05D007199 ORTHO05D007257 9.8e-12 75.1 250 28.0
Gorai.008G127500 Gossypium raimondii HOM05D007199 ORTHO05D007257 9.8e-12 75.1 93 51.6
Ah.15g093270 Amaranthus hybridus HOM05D021513 ORTHO05D007257 3.7e-11 73.2 239 30.5
Sc23g0001940 Simmondsia chinensis HOM05D007199 ORTHO05D007257 1.2e-09 68.2 293 27.0
Cc02_g39760 Coffea canephora HOM05D007199 ORTHO05D007257 1.6e-09 67.8 364 31.0
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 1.7e-08 64.3 251 30.3
PGR042G0368 Punica granatum HOM05D007199 ORTHO05D007257 2.3e-08 63.9 335 29.6
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-07 60.8 162 35.2
Peaxi162Scf00767g00113 Petunia axillaris HOM05D007199 ORTHO05D007257 2.5e-07 60.5 195 31.3


User provided reference genes

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