Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 7.7e-164 580.5 308 100.0
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 1.5e-130 469.9 308 83.1
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 5.2e-128 461.5 298 81.9
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 5.8e-127 458.0 303 80.5
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 9.9e-127 457.2 299 81.6
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 6.4e-126 454.5 298 80.5
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 2.4e-125 452.6 298 80.2
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.0e-123 447.2 301 78.4
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 1.0e-123 447.2 300 78.3
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 2.5e-122 442.6 297 78.8
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 2.5e-122 442.6 300 77.7
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 5.6e-122 441.4 301 78.1
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 7.3e-122 441.0 302 79.1
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 1.6e-121 439.9 301 78.4
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 2.1e-121 439.5 297 78.1
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 3.6e-121 438.7 300 77.3
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 8.1e-121 437.6 299 78.6
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.5e-119 433.3 303 78.5
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 1.5e-119 433.3 293 80.2
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 2.6e-119 432.6 309 75.7
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 2.6e-119 432.6 286 80.8
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 3.4e-119 432.2 309 76.7
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 4.4e-119 431.8 309 75.7
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 1.3e-118 430.3 298 77.2
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.7e-118 429.9 309 75.7
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 6.4e-118 427.9 291 78.4
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 2.4e-117 426.0 298 77.9
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 3.2e-117 425.6 302 77.2
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 4.1e-117 425.2 311 75.9
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 7.1e-117 424.5 301 77.4
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 1.0e-115 420.6 289 78.9
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 1.7e-115 419.9 307 75.9
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 3.0e-115 419.1 295 77.6
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 3.0e-115 419.1 290 75.9
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 3.0e-115 419.1 302 75.8
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 6.6e-115 417.9 306 75.8
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 3.3e-114 415.6 287 78.7
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 5.6e-114 414.8 289 77.9
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 5.6e-114 414.8 288 77.8
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 7.3e-114 414.5 293 77.1
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 9.6e-114 414.1 302 76.2
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 3.6e-113 412.1 299 74.6
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 6.2e-113 411.4 292 75.7
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 8.1e-113 411.0 278 78.4
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 1.8e-112 409.8 298 74.5
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 1.8e-112 409.8 300 74.3
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 3.1e-112 409.1 299 76.6
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 6.9e-112 407.9 301 74.8
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 6.9e-112 407.9 279 78.9
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 6.9e-112 407.9 288 76.7
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 2.0e-111 406.4 297 75.8
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 2.6e-111 406.0 297 76.4
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 2.6e-111 406.0 300 75.3
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 3.4e-111 405.6 288 76.7
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 7.6e-111 404.4 267 80.5
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 2.9e-110 402.5 289 76.5
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 2.9e-110 402.5 300 74.7
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 8.4e-110 401.0 296 75.0
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 3.2e-109 399.1 295 73.6
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 9.3e-109 397.5 299 74.9
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 1.2e-108 397.1 298 72.5
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 1.6e-108 396.7 261 80.8
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 2.1e-108 396.4 275 75.6
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 3.5e-108 395.6 290 74.8
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 6.0e-108 394.8 304 72.0
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 1.3e-107 393.7 294 73.8
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 8.1e-105 384.4 299 70.2
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 2.0e-103 379.8 242 81.0
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 1.9e-101 373.2 289 72.3
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 2.4e-101 372.9 292 70.2
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.2e-100 370.5 262 76.0
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 4.6e-100 368.6 259 76.4
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 2.3e-99 366.3 299 69.9
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 8.2e-89 331.3 299 63.2
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 1.4e-88 330.5 256 66.0
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 5.8e-87 325.1 240 69.6
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 1.7e-86 323.6 250 69.2
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.9e-85 320.1 300 64.0
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 1.5e-79 300.4 218 75.2
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 8.8e-75 284.6 240 70.4
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 1.7e-73 280.4 182 83.0
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 2.5e-69 266.5 197 68.5
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 9.7e-66 254.6 165 80.6
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 8.5e-62 241.5 272 51.1
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 2.8e-57 226.5 150 80.7
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.1e-56 224.6 139 85.6
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 1.4e-56 224.2 193 66.3
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 3.2e-53 213.0 286 53.1
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 7.5e-42 175.3 118 80.5
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 2.3e-38 163.7 178 56.7
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 1.3e-33 147.9 97 76.3
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.9e-24 117.5 109 61.5
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 1.1e-21 108.2 130 53.1
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.5e-21 107.1 63 90.5
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 1.6e-12 77.8 47 80.9


User provided reference genes

Program Settings