Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 1.7e-79 299.7 200 100.0
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 2.1e-45 186.4 199 72.9
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 5.7e-43 178.3 200 75.0
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 7.0e-41 171.4 199 70.9
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 1.2e-40 170.6 201 72.1
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 5.0e-39 165.2 171 76.6
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.5e-38 163.7 168 75.0
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 2.5e-38 162.9 160 79.4
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 3.3e-38 162.5 169 75.7
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 4.3e-38 162.2 171 76.6
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 9.5e-38 161.0 204 69.1
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 2.1e-37 159.8 197 67.5
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 6.1e-37 158.3 204 68.1
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 6.1e-37 158.3 204 68.1
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.0e-36 157.5 197 67.0
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 3.0e-36 156.0 202 68.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 6.8e-36 154.8 168 72.0
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 6.8e-36 154.8 173 72.3
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 2.0e-35 153.3 171 74.3
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 3.4e-35 152.5 160 76.2
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 9.8e-35 151.0 200 65.5
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.3e-34 150.6 168 75.6
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 1.3e-34 150.6 158 75.9
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 3.7e-34 149.1 172 72.1
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 1.4e-33 147.1 202 62.9
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 1.8e-33 146.7 173 71.1
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 1.8e-33 146.7 198 67.2
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 5.4e-33 145.2 160 73.1
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 5.4e-33 145.2 198 66.7
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 7.0e-33 144.8 168 72.6
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 3.5e-32 142.5 137 85.4
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 3.5e-32 142.5 162 75.3
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.3e-31 140.6 137 84.7
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 1.7e-31 140.2 204 63.7
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 8.6e-31 137.9 199 64.8
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 1.1e-30 137.5 197 63.5
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 2.5e-30 136.3 195 63.6
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 3.3e-30 136.0 190 65.3
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 5.6e-30 135.2 141 75.2
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 7.3e-30 134.8 206 62.1
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.2e-29 134.0 162 72.8
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 2.1e-29 133.3 197 63.5
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 4.7e-29 132.1 185 64.3
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 8.0e-29 131.3 193 61.7
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 3.1e-28 129.4 193 61.1
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 3.1e-28 129.4 166 72.9
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 3.1e-28 129.4 225 59.6
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 5.2e-28 128.6 171 68.4
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 5.2e-28 128.6 165 69.1
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.5e-27 127.1 161 72.0
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 7.5e-27 124.8 187 62.6
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 9.8e-27 124.4 175 67.4
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 1.7e-26 123.6 200 63.0
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 2.9e-26 122.9 164 72.0
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 4.9e-26 122.1 197 62.4
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 4.9e-26 122.1 193 64.8
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.9e-25 120.2 166 65.7
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 4.1e-25 119.0 200 62.5
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.2e-24 117.5 176 63.1
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 3.5e-24 115.9 198 59.6
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 3.5e-24 115.9 156 67.3
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 4.6e-24 115.5 171 67.3
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 4.6e-24 115.5 172 67.4
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.3e-23 114.0 197 58.4
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.3e-23 113.2 123 82.1
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 3.0e-23 112.8 141 73.0
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 6.6e-23 111.7 199 59.3
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.1e-22 110.9 174 66.1
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 1.5e-22 110.5 185 62.7
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.5e-22 110.5 167 65.9
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.5e-22 110.5 168 64.9
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.9e-22 110.2 159 46.5
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 4.3e-22 109.0 192 60.4
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 5.6e-22 108.6 170 65.3
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 9.5e-22 107.8 171 62.0
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 9.5e-22 107.8 171 62.0
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 1.6e-21 107.1 171 62.0
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 1.6e-21 107.1 171 62.6
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.6e-21 107.1 166 64.5
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.6e-21 107.1 166 64.5
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 1.6e-21 107.1 181 59.7
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.1e-21 106.7 128 77.3
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 2.8e-21 106.3 166 64.5
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 4.7e-21 105.5 171 62.0
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 4.7e-21 105.5 130 75.4
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 6.2e-21 105.1 165 64.2
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 8.1e-21 104.8 170 61.2
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 1.1e-20 104.4 165 63.6
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 5.2e-20 102.1 169 60.4
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 5.2e-20 102.1 162 64.2
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 6.8e-20 101.7 128 75.8
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.2e-19 100.9 171 61.4
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 7.5e-19 98.2 170 57.6
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 7.5e-19 98.2 67 74.6
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 1.7e-18 97.1 165 66.1
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 1.1e-17 94.4 170 58.8
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.4e-17 93.2 202 51.5
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 9.2e-17 91.3 168 61.3
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 1.6e-16 90.5 170 58.2
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.1e-16 90.1 117 75.2
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 3.5e-16 89.4 170 57.6
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.9e-15 85.9 116 74.1
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.5e-14 84.0 148 58.8
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 4.3e-14 82.4 182 58.2
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 5.6e-14 82.0 146 63.0
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 3.6e-13 79.3 150 61.3
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 1.8e-12 77.0 111 56.8
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 4.9e-10 68.9 152 53.9
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 8.4e-10 68.2 118 67.8


User provided reference genes

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