Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0156 Trochodendron aralioides HOM05D024515 ORTHO05D012445 4.1e-105 384.8 203 100.0
TAR362G0812 Trochodendron aralioides HOM05D024515 ORTHO05D012445 5.1e-71 271.6 170 82.4
TAR633G0499 Trochodendron aralioides HOM05D024515 ORTHO05D000140 1.3e-53 213.8 126 84.9
TAR636G3616 Trochodendron aralioides HOM05D024515 ORTHO05D012445 1.1e-41 174.1 166 57.8
TAR636G1919 Trochodendron aralioides HOM05D024515 ORTHO05D012445 5.8e-35 151.8 93 82.8
TAR636G3496 Trochodendron aralioides HOM05D003659 ORTHO05D004298 5.7e-14 82.0 59 69.5
Sopen10g020570 Solanum pennellii HOM05D003487 ORTHO05D000140 3.4e-11 72.8 170 33.5
PSO339G4446 Papaver somniferum HOM05D000665 ORTHO05D012445 2.9e-10 69.7 165 31.5
Hma1.2p1_1819F.1_g304060 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 5.0e-10 68.9 166 34.9
Cc01_g06590 Coffea canephora HOM05D000665 ORTHO05D000140 8.5e-10 68.2 131 30.5
Nn1g03604 Nelumbo nucifera HOM05D042748 ORTHO05D025800 1.4e-09 67.4 121 37.2
Haze_23288 Corylus avellana HOM05D000665 ORTHO05D000140 2.5e-09 66.6 158 29.1
Haze_23291 Corylus avellana HOM05D000665 ORTHO05D000140 2.5e-09 66.6 158 29.1
Nn2g14680 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.5e-09 66.6 156 27.6
Aqoxy1G00439 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 3.2e-09 66.2 180 30.0
QL01p016365 Quercus lobata HOM05D000665 ORTHO05D000140 3.2e-09 66.2 171 26.9
Dinv29316 Davidia involucrata HOM05D000001 ORTHO05D000003 9.4e-09 64.7 169 28.4
Nn8g40887 Nelumbo nucifera HOM05D000665 ORTHO05D000140 9.4e-09 64.7 147 32.0
Potri.001G014200 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.6e-08 63.9 162 29.0
Sopen09g020440 Solanum pennellii HOM05D003487 ORTHO05D000140 1.6e-08 63.9 161 32.9
TAR636G2225 Trochodendron aralioides HOM05D003487 ORTHO05D000140 2.1e-08 63.5 155 28.4
Hma1.2p1_0854F.1_g228980 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 3.6e-08 62.8 155 33.5
CAN.G687.22 Capsicum annuum HOM05D000541 ORTHO05D000137 6.1e-08 62.0 148 31.8
Cc11_g14620 Coffea canephora HOM05D003487 ORTHO05D000140 6.1e-08 62.0 163 28.8
Potri.011G163248 Populus trichocarpa HOM05D003487 ORTHO05D000140 6.1e-08 62.0 161 31.1
Potri.015G008050 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.4e-07 60.8 161 30.4
Aqoxy5G00862 Aquilegia oxysepala HOM05D011109 ORTHO05D012445 1.8e-07 60.5 164 28.0
Sopen06g011790 Solanum pennellii HOM05D003487 ORTHO05D000140 1.8e-07 60.5 161 31.1
Potri.002G206500 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.3e-07 60.1 161 29.2
Potri.009G022650 Populus trichocarpa HOM05D003487 ORTHO05D000140 3.0e-07 59.7 163 31.3
Aqoxy4G02942 Aquilegia oxysepala HOM05D011109 ORTHO05D012445 5.1e-07 58.9 163 28.2
Potri.012G061366 Populus trichocarpa HOM05D003487 ORTHO05D000140 5.1e-07 58.9 164 30.5
Solyc12g036870.3 Solanum lycopersicum HOM05D003487 ORTHO05D000140 5.1e-07 58.9 161 29.8
Hma1.2p1_0619F.1_g190440 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 6.7e-07 58.5 164 31.1
Aqoxy5G01384 Aquilegia oxysepala HOM05D011109 ORTHO05D012445 8.8e-07 58.2 163 28.2
Nn7g37837 Nelumbo nucifera HOM05D019910 ORTHO05D000140 8.8e-07 58.2 104 34.6
Potri.006G196716 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.8e-07 58.2 161 29.2
Aqoxy1G02665 Aquilegia oxysepala HOM05D011109 ORTHO05D012445 1.1e-06 57.8 163 28.2
Hma1.2p1_0065F.1_g035600 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 1.1e-06 57.8 175 29.7
vmacro02377 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 1.1e-06 57.8 159 29.6
Nn1g06804 Nelumbo nucifera HOM05D014125 ORTHO05D000140 1.5e-06 57.4 163 25.2
QL06p004451 Quercus lobata HOM05D003487 ORTHO05D000140 1.5e-06 57.4 161 28.0
Thecc.09G253400 Theobroma cacao HOM05D000665 ORTHO05D000140 1.5e-06 57.4 158 27.2
Solyc10g018645.1 Solanum lycopersicum HOM05D003487 ORTHO05D000140 2.0e-06 57.0 161 29.8
Hma1.2p1_0148F.1_g065930 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 2.6e-06 56.6 152 30.3
Hma1.2p1_0825F.1_g224780 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.6e-06 56.6 155 30.3
QL08p053984 Quercus lobata HOM05D000034 ORTHO05D000037 2.6e-06 56.6 162 29.6
Rhsim13G0204800 Rhododendron simsii HOM05D000665 ORTHO05D000140 2.6e-06 56.6 138 29.7
vmacro11918 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 2.6e-06 56.6 159 29.6
Hma1.2p1_0496F.1_g166260 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 4.4e-06 55.8 154 30.5
Potri.006G202550 Populus trichocarpa HOM05D003487 ORTHO05D000140 4.4e-06 55.8 162 29.6
Aqoxy1G02676 Aquilegia oxysepala HOM05D003487 ORTHO05D000140 5.7e-06 55.5 156 26.9
Nitab4.5_0006735g0070 Nicotiana tabacum HOM05D003487 ORTHO05D000140 5.7e-06 55.5 150 29.3
CAN.G1245.14 Capsicum annuum HOM05D003487 ORTHO05D000140 7.4e-06 55.1 154 31.2
Potri.006G146100 Populus trichocarpa HOM05D003487 ORTHO05D000140 7.4e-06 55.1 159 28.9
Nitab4.5_0003364g0100 Nicotiana tabacum HOM05D003487 ORTHO05D000140 9.7e-06 54.7 157 29.3
QL05p002211 Quercus lobata HOM05D000034 ORTHO05D000037 9.7e-06 54.7 156 30.1
QL11p035081 Quercus lobata HOM05D000034 ORTHO05D000037 9.7e-06 54.7 156 30.1


User provided reference genes

Program Settings