Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 1.0e-193 679.9 343 100.0
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 1.5e-78 297.4 344 53.2
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 5.9e-72 275.4 341 50.4
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.3e-71 274.2 341 50.4
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 1.6e-69 267.3 338 51.5
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 2.2e-66 256.9 345 48.1
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 3.7e-66 256.1 345 49.3
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 1.8e-65 253.8 348 48.9
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 4.1e-65 252.7 342 46.8
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 3.5e-64 249.6 346 46.8
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 4.5e-64 249.2 340 47.1
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.9e-63 246.5 341 48.4
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 2.5e-62 243.4 347 46.7
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 3.3e-62 243.0 347 47.8
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.2e-62 242.7 341 47.8
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.2e-62 242.7 340 46.2
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 2.1e-61 240.4 342 47.1
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 9.8e-59 231.5 346 46.5
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.7e-58 230.7 341 46.3
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 2.2e-58 230.3 358 46.4
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 3.7e-58 229.6 348 46.0
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.4e-57 227.6 346 46.0
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 1.2e-56 224.6 306 48.7
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.0e-56 223.8 285 47.7
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 2.7e-56 223.4 342 45.9
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.0e-55 221.5 330 45.8
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 8.6e-55 218.4 330 45.8
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 8.6e-55 218.4 254 54.3
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 1.9e-54 217.2 364 41.5
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.3e-54 216.5 344 43.9
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.1e-53 213.8 344 43.9
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 6.8e-52 208.8 345 44.9
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.3e-50 204.5 332 42.5
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.6e-48 197.6 344 40.4
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 2.7e-48 196.8 276 47.8
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 6.0e-48 195.7 345 40.6
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 7.8e-48 195.3 367 39.5
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 5.0e-47 192.6 343 40.5
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 8.6e-47 191.8 351 39.9
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 2.3e-44 183.7 344 37.2
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 2.3e-44 183.7 337 37.4
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 4.4e-43 179.5 257 49.0
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 5.8e-43 179.1 349 38.1
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 3.2e-41 173.3 344 38.7
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 9.2e-41 171.8 339 38.9
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 3.5e-40 169.9 341 37.2
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.0e-39 168.3 341 37.0
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 3.0e-39 166.8 330 38.5
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 3.9e-39 166.4 331 38.1
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.1e-38 164.9 339 36.9
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 1.5e-38 164.5 340 38.8
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 2.5e-38 163.7 299 38.8
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 4.3e-38 162.9 347 39.2
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 7.3e-38 162.2 318 39.9
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 1.2e-37 161.4 342 38.9
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 3.6e-37 159.8 350 35.1
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 3.6e-37 159.8 342 38.9
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 4.7e-37 159.5 346 37.6
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 4.7e-37 159.5 380 36.8
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 8.1e-37 158.7 337 38.3
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.3e-36 157.1 339 34.5
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.3e-36 157.1 339 34.5
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 4.0e-36 156.4 348 39.1
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.5e-35 154.5 329 38.9
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.5e-35 154.5 328 37.8
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 3.4e-35 153.3 346 36.7
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 4.9e-34 149.4 347 36.6
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 6.4e-34 149.1 378 35.4
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.4e-33 147.9 330 34.5
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.4e-33 147.9 348 35.9
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 3.0e-31 140.2 256 39.1
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 3.9e-31 139.8 350 35.1
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 6.6e-31 139.0 330 37.9
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 1.1e-30 138.3 341 35.5
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.9e-30 137.5 368 34.2
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 7.3e-30 135.6 343 34.1
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 4.7e-29 132.9 346 34.4
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 1.8e-28 131.0 364 30.2
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 6.8e-28 129.0 339 34.2
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.9e-26 123.6 357 31.9
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 3.2e-25 120.2 245 39.6
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 4.2e-25 119.8 160 46.9
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 8.7e-23 112.1 365 28.5
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 1.8e-20 104.4 262 37.0
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 4.4e-19 99.8 330 29.7
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 8.4e-18 95.5 295 31.5
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 4.2e-17 93.2 360 25.0
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 7.1e-17 92.4 212 36.8
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 7.1e-17 92.4 349 30.4
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 2.3e-15 87.4 182 35.2
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 4.3e-14 83.2 342 27.2
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 4.3e-14 83.2 317 30.3
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 7.3e-14 82.4 88 51.1
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 2.1e-13 80.9 210 33.3
CDE04G2262 Ceratophyllum demersum HOM05D061004 ORTHO05D043845 6.4e-10 69.3 327 27.8
CDE12G0316 Ceratophyllum demersum HOM05D061004 ORTHO05D043845 6.0e-08 62.8 326 25.8
SHI07413 Sapria himalayana HOM05D007538 ORTHO05D009464 4.3e-06 56.6 108 35.2


User provided reference genes

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