Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.8e-216 754.2 383 100.0
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.4e-191 672.2 383 88.8
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.0e-173 613.6 383 80.2
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.2e-168 595.9 382 78.5
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.1e-166 589.3 384 77.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 7.9e-166 587.4 377 76.7
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 6.6e-165 584.3 383 76.5
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 6.2e-163 577.8 383 77.0
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 6.2e-163 577.8 383 76.0
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.8e-162 576.2 383 74.9
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.4e-162 575.9 383 76.2
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 6.9e-162 574.3 383 75.5
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.5e-161 573.2 383 74.4
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 7.6e-161 570.9 383 75.5
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 2.4e-159 565.8 383 75.7
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 9.3e-159 563.9 393 76.3
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.2e-158 563.5 383 73.9
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.1e-158 562.8 384 75.3
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.7e-158 562.4 385 75.1
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.6e-158 561.6 383 73.6
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 4.6e-158 561.6 388 74.5
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 7.9e-158 560.8 384 73.4
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 7.9e-158 560.8 383 73.6
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.0e-157 560.5 381 74.0
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.0e-157 558.9 384 74.0
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 8.7e-157 557.4 384 72.4
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.1e-156 557.0 383 72.1
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-155 553.5 393 70.7
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.3e-155 553.5 383 72.8
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 2.1e-155 552.7 384 72.4
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.8e-155 552.4 403 70.7
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 2.8e-155 552.4 384 73.7
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 6.2e-155 551.2 383 71.8
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 8.1e-155 550.8 384 72.1
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 1.1e-154 550.4 407 68.8
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.8e-154 549.7 384 72.9
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 3.1e-154 548.9 389 71.2
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 4.0e-154 548.5 411 68.9
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 5.3e-154 548.1 383 71.8
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 9.0e-154 547.4 383 72.6
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 2.6e-153 545.8 413 67.8
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 3.4e-153 545.4 438 66.2
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 4.5e-153 545.0 384 72.7
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 7.6e-153 544.3 383 71.8
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 7.6e-153 544.3 383 72.6
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.2e-152 542.7 383 71.8
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 4.9e-152 541.6 383 71.0
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 6.5e-152 541.2 384 70.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.9e-151 539.7 366 76.0
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 2.5e-151 539.3 383 70.5
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 3.2e-151 538.9 382 70.9
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.2e-151 538.9 436 66.1
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 9.3e-151 537.3 381 71.1
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 6.0e-150 534.6 384 70.8
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.8e-149 533.1 384 71.6
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.3e-149 532.7 381 71.9
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 3.9e-149 531.9 384 69.5
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.9e-148 529.6 383 69.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 3.3e-148 528.9 383 70.0
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 3.3e-148 528.9 383 70.2
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 4.3e-148 528.5 383 69.7
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 1.3e-147 526.9 360 74.7
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.2e-147 524.2 383 71.0
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 4.1e-146 521.9 384 68.0
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 6.9e-146 521.2 383 70.0
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 9.0e-146 520.8 383 68.7
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 9.0e-146 520.8 383 68.4
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.5e-145 520.0 383 69.7
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.6e-145 519.2 414 65.2
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 4.5e-145 518.5 383 69.2
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 7.6e-145 517.7 383 70.0
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 1.7e-144 516.5 383 67.9
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.9e-144 515.8 381 69.0
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 2.9e-144 515.8 383 70.0
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.9e-144 515.8 383 69.7
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.9e-144 515.8 408 65.7
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.1e-143 513.8 436 63.8
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.9e-143 513.1 384 69.5
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 4.2e-143 511.9 383 68.4
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 9.3e-143 510.8 384 69.3
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.6e-142 510.0 383 67.1
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 2.7e-142 509.2 379 68.6
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 3.5e-142 508.8 384 69.3
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 6.1e-142 508.1 384 69.0
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 6.1e-142 508.1 384 69.0
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.3e-141 506.1 383 67.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.3e-140 502.3 384 67.4
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.2e-139 499.6 386 66.1
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 2.8e-139 499.2 386 66.3
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 2.8e-139 499.2 328 75.3
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 3.1e-138 495.7 384 65.9
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-137 493.0 383 67.4
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 3.8e-136 488.8 382 63.9
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 5.5e-135 485.0 401 64.3
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 1.0e-133 480.7 384 65.4
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.5e-132 476.1 383 64.5
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.8e-131 472.6 418 60.3
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 2.4e-130 469.5 463 55.5
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 3.9e-125 452.2 387 61.0
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 5.7e-124 448.4 335 68.1
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.4e-122 443.0 388 62.4
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.2e-121 440.7 386 61.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.4e-114 416.4 280 77.5
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.0e-112 411.0 388 59.0
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 2.6e-108 396.4 281 74.0
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.5e-79 300.8 427 43.6
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.2e-78 297.7 245 64.1
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 2.6e-68 263.5 456 37.7
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.4e-60 236.5 158 75.3
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.4e-59 231.9 158 74.7
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.4e-59 231.9 158 74.1
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 8.7e-56 221.9 342 42.4
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.1e-48 196.1 158 65.8
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 6.6e-48 195.7 148 67.6
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.5e-44 184.5 140 62.9
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.8e-43 179.9 129 68.2
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.3e-39 166.8 126 67.5
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 1.4e-34 151.4 102 63.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 5.1e-32 142.9 113 66.4
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 4.5e-28 129.8 103 56.3
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 8.7e-24 115.5 99 63.6
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 5.3e-21 106.3 90 63.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.0e-11 75.5 165 32.1
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.0e-11 75.5 124 37.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 1.0e-08 65.5 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 2.3e-08 64.3 39 76.9
GSVIVG01032303001 Vitis vinifera HOM05D002866 ORTHO05D440048 1.5e-07 61.6 33 87.9


User provided reference genes

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