Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 0.0e+00 1384.0 719 100.0
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 9.4e-205 717.6 738 55.3
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 3.3e-197 692.6 726 55.4
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.8e-188 662.9 733 51.6
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 3.1e-163 579.7 732 48.9
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 3.0e-158 563.1 804 45.1
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 3.9e-158 562.8 739 49.4
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 1.1e-157 561.2 741 45.9
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.2e-154 551.2 790 46.1
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 8.7e-150 535.0 718 47.5
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 1.1e-147 528.1 739 44.8
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.0e-146 523.9 735 45.3
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.7e-145 520.8 744 43.4
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 3.2e-144 516.5 739 45.7
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 1.1e-141 508.1 924 40.3
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.4e-139 500.4 727 44.0
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 8.4e-137 491.9 794 42.6
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 1.9e-136 490.7 733 42.6
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 9.3e-136 488.4 731 41.5
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 9.6e-133 478.4 803 41.7
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 2.1e-132 477.2 733 42.6
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 8.2e-132 475.3 733 43.0
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 8.2e-132 475.3 681 45.4
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 8.2e-132 475.3 724 41.9
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 6.9e-131 472.2 738 43.4
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 9.0e-131 471.9 730 41.2
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.2e-129 467.2 674 45.5
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 8.4e-129 465.3 751 41.1
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 5.5e-128 462.6 738 40.1
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 7.2e-128 462.2 752 41.6
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 4.6e-127 459.5 726 41.5
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 4.6e-127 459.5 893 38.0
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.3e-126 458.0 726 41.3
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.0e-126 456.8 727 41.5
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.1e-120 438.3 727 40.9
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 2.5e-120 437.2 727 41.5
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 3.2e-120 436.8 717 40.6
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 7.2e-120 435.6 734 40.1
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 2.3e-118 430.6 734 40.2
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 3.9e-118 429.9 740 39.1
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 5.1e-118 429.5 729 40.1
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 1.1e-117 428.3 738 39.7
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.4e-115 421.4 672 42.1
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 9.1e-115 418.7 735 37.6
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 1.2e-114 418.3 578 46.7
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 2.6e-114 417.2 734 39.6
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.9e-112 411.0 679 41.4
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 6.1e-111 406.0 812 38.4
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 2.3e-110 404.1 721 38.1
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 3.0e-110 403.7 733 36.6
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 4.4e-109 399.8 740 38.4
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 4.4e-109 399.8 740 38.4
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 3.7e-108 396.7 836 36.7
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.6e-106 391.3 753 37.3
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 5.9e-106 389.4 733 37.7
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 1.7e-105 387.9 799 37.0
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 3.8e-105 386.7 757 37.6
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 5.0e-105 386.3 607 43.0
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 8.5e-105 385.6 738 37.5
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 1.1e-104 385.2 712 38.9
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 1.5e-104 384.8 752 38.8
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 1.9e-104 384.4 735 37.4
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 1.2e-103 381.7 683 39.4
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 2.1e-103 380.9 736 37.8
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 2.1e-103 380.9 736 37.8
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 2.1e-103 380.9 736 37.8
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 2.1e-103 380.9 739 36.5
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 8.0e-103 379.0 763 37.1
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 3.0e-102 377.1 687 41.8
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 1.3e-100 371.7 695 39.1
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.4e-99 367.5 723 38.2
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.4e-99 367.5 760 34.6
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 9.1e-99 365.5 734 37.1
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.0e-97 362.1 345 58.0
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 8.5e-97 359.0 719 36.2
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 2.5e-96 357.5 808 34.2
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 2.1e-95 354.4 736 37.1
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 5.9e-90 336.3 740 33.2
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.1e-88 332.0 761 33.2
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 8.0e-87 325.9 731 34.6
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 4.4e-85 320.1 668 34.4
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 4.9e-84 316.6 506 38.9
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.3e-81 308.5 439 48.1
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 3.8e-81 307.0 355 49.6
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 1.2e-77 295.4 749 31.6
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 3.2e-75 287.3 187 82.9
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 7.8e-74 282.7 671 34.0
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 5.2e-70 270.0 279 53.4
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 1.9e-67 261.5 683 33.5
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 1.2e-66 258.8 417 40.5
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 5.6e-64 250.0 276 47.8
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.1e-54 217.6 273 46.5
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 6.8e-54 216.5 517 33.1
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 1.3e-49 202.2 230 50.0
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 2.3e-49 201.4 695 27.6
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 5.4e-43 180.3 163 64.4
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 6.0e-42 176.8 390 34.4
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 1.3e-36 159.1 525 28.6
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 3.8e-36 157.5 156 58.3
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 3.2e-35 154.5 341 36.4
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.6e-34 152.1 137 64.2
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 6.0e-34 150.2 563 28.2
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.1e-32 146.0 345 32.8
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.6e-31 142.1 156 55.1
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.4e-27 129.0 312 33.3
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 4.6e-26 124.0 317 32.5
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 4.3e-24 117.5 624 25.3
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 1.3e-23 115.9 330 29.4
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 1.3e-20 105.9 166 41.0
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 8.4e-20 103.2 173 43.9
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 5.7e-16 90.5 90 53.3
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 9.0e-14 83.2 378 24.3
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 1.2e-13 82.8 128 39.1
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 3.8e-12 77.8 618 20.9
SEGI_32981 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.0e-09 69.7 249 27.7
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 1.5e-08 65.9 157 36.3
GSVIVG01012998001 Vitis vinifera HOM05D006140 ORTHO05D007834 3.3e-08 64.7 58 60.3
Os02g0128300 Oryza sativa ssp. japonica HOM05D006140 ORTHO05D007834 5.7e-08 63.9 157 27.4
CBR_g24386 Chara braunii HOM05D006140 ORTHO05D007834 3.7e-07 61.2 152 29.6
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 1.8e-06 58.9 185 24.9
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 2.4e-06 58.5 56 51.8


User provided reference genes

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