Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 2.6e-186 655.2 324 100.0
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 7.2e-96 354.8 271 69.0
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 6.8e-78 295.0 245 65.3
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.6e-55 220.7 240 52.5
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 9.9e-53 211.5 255 48.2
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 3.8e-52 209.5 275 45.8
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 1.6e-50 204.1 260 48.8
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.1e-48 198.0 254 45.3
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 3.3e-48 196.4 253 48.6
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 5.6e-48 195.7 265 43.4
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 1.1e-46 191.4 236 50.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 1.8e-46 190.7 246 47.2
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.8e-46 190.7 263 46.8
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 5.3e-46 189.1 260 46.5
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 1.3e-44 184.5 255 43.1
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.7e-44 184.1 264 42.0
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 4.2e-43 179.5 254 42.1
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 5.4e-43 179.1 254 42.1
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 4.6e-42 176.0 255 43.1
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 6.0e-42 175.6 252 41.7
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.3e-41 174.5 248 44.0
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 8.7e-41 171.8 249 44.2
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 2.5e-40 170.2 237 41.8
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 8.1e-39 165.2 246 44.3
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.4e-38 164.5 258 40.3
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.2e-37 161.4 278 37.1
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 1.5e-37 161.0 249 43.0
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 4.5e-37 159.5 256 44.5
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 5.8e-37 159.1 262 40.1
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 7.6e-37 158.7 240 39.2
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.0e-36 158.3 283 37.5
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.7e-36 157.5 243 44.0
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.5e-35 153.7 281 37.0
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.5e-35 153.7 281 37.0
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 4.2e-35 152.9 289 40.1
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 5.5e-35 152.5 244 42.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 5.5e-35 152.5 263 37.3
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 9.3e-35 151.8 243 41.2
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 1.6e-34 151.0 242 44.2
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.6e-34 151.0 230 40.0
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 2.3e-33 147.1 257 38.1
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 3.0e-33 146.7 251 40.6
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 5.1e-33 146.0 251 41.4
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 1.9e-32 144.1 245 39.2
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.5e-32 143.7 286 35.3
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 4.3e-32 142.9 268 38.4
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 4.8e-31 139.4 263 35.4
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.4e-30 137.9 249 40.6
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 2.4e-30 137.1 260 37.3
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 2.4e-30 137.1 243 37.9
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 3.1e-30 136.7 242 38.0
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 5.3e-30 136.0 281 37.7
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 6.9e-30 135.6 257 36.6
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.0e-29 134.0 234 38.9
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 4.5e-29 132.9 206 41.3
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 1.4e-27 127.9 263 35.4
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 4.2e-27 126.3 249 34.5
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.2e-26 124.8 261 34.9
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 2.1e-26 124.0 261 34.5
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 7.9e-26 122.1 307 31.3
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 7.9e-26 122.1 168 45.2
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 2.5e-24 117.1 121 51.2
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 7.4e-24 115.5 244 34.0
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 7.4e-24 115.5 265 32.1
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.4e-24 115.5 277 33.9
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 2.8e-23 113.6 244 34.8
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 8.2e-23 112.1 154 43.5
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.4e-22 111.3 293 31.7
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 4.1e-22 109.8 215 37.2
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 5.3e-22 109.4 265 33.6
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 5.3e-22 109.4 138 45.7
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 5.3e-22 109.4 239 33.1
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 3.4e-21 106.7 174 41.4
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 5.9e-21 105.9 275 35.6
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.7e-21 105.5 165 40.0
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 1.3e-20 104.8 261 33.7
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 2.2e-20 104.0 247 34.0
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.9e-20 103.6 168 43.5
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 1.1e-19 101.7 218 34.4
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 1.9e-19 100.9 220 36.4
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 3.2e-19 100.1 219 36.1
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 3.2e-19 100.1 192 39.6
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 5.5e-19 99.4 215 34.9
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 5.5e-19 99.4 291 31.6
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 5.5e-19 99.4 242 34.3
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 1.6e-18 97.8 299 29.4
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 3.6e-18 96.7 186 37.6
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 3.6e-18 96.7 192 39.1
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 4.6e-18 96.3 252 36.5
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 4.6e-18 96.3 275 33.5
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 1.0e-17 95.1 256 29.7
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.8e-17 94.4 254 33.1
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 3.9e-17 93.2 252 31.0
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 2.0e-16 90.9 137 38.7
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 3.3e-16 90.1 118 45.8
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 5.7e-16 89.4 279 30.1
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 9.7e-16 88.6 238 32.4
Nn3g18224 Nelumbo nucifera HOM05D006585 ORTHO05D007798 1.1e-14 85.1 72 63.9
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 9.1e-14 82.0 224 33.0
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 3.4e-13 80.1 258 29.8
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 5.9e-13 79.3 97 46.4
Nn1g00170 Nelumbo nucifera HOM05D006585 ORTHO05D007798 1.4e-11 74.7 52 65.4
SHI17755 Sapria himalayana HOM05D006585 ORTHO05D007798 3.2e-11 73.6 116 37.1
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 5.5e-11 72.8 187 35.3
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 9.4e-11 72.0 157 36.9
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 1.2e-10 71.6 147 36.1
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 1.6e-10 71.2 266 28.2
CDE06G0796 Ceratophyllum demersum HOM05D006585 ORTHO05D007798 1.6e-10 71.2 237 30.4
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 2.7e-10 70.5 78 51.3
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 1.0e-09 68.6 289 26.6
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 1.1e-08 65.1 107 40.2
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.6e-08 63.9 130 35.4
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 5.7e-08 62.8 99 43.4
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 9.7e-08 62.0 122 33.6
Lalb_Chr16g0392231 Lupinus albus HOM05D006585 ORTHO05D007798 8.2e-07 58.9 101 42.6


User provided reference genes

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