Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 0.0e+00 1547.7 779 100.0
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-260 902.5 725 68.3
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.6e-242 843.2 733 65.6
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.0e-220 770.8 729 60.8
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 5.6e-211 738.4 647 64.1
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 6.2e-210 734.9 818 54.6
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 8.1e-210 734.6 758 57.1
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.8e-202 709.5 722 57.9
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 5.4e-198 695.3 741 56.8
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 9.3e-198 694.5 717 57.2
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 3.5e-197 692.6 722 56.8
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 5.1e-196 688.7 735 54.0
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 2.0e-192 676.8 725 55.9
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 9.9e-192 674.5 723 54.4
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 8.4e-191 671.4 733 54.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 1.1e-187 661.0 728 54.1
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.5e-187 659.8 724 55.0
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 4.5e-184 649.0 725 55.7
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.5e-182 643.3 725 53.9
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 3.9e-180 636.0 729 54.2
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.9e-180 636.0 721 53.5
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 3.4e-176 622.9 723 52.3
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 4.5e-176 622.5 716 52.9
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 5.9e-176 622.1 726 53.6
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.2e-175 620.2 693 53.4
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.8e-172 610.5 722 51.9
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.0e-172 609.8 727 52.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 8.7e-172 608.2 716 51.7
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 5.7e-171 605.5 714 52.2
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.6e-170 604.0 780 50.1
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.2e-170 603.6 720 50.7
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 4.8e-170 602.4 726 51.5
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 8.2e-170 601.7 730 50.8
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.4e-169 600.9 727 51.3
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.4e-169 600.9 696 53.2
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.1e-169 599.4 720 51.2
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.6e-168 596.7 722 51.4
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-167 594.7 717 53.1
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.3e-167 594.3 721 50.5
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 1.3e-167 594.3 730 50.8
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.7e-167 594.0 727 50.2
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.2e-167 593.6 697 51.9
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 6.5e-167 592.0 726 52.8
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 2.7e-165 586.6 729 50.8
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.6e-165 586.3 713 51.3
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 7.9e-165 585.1 717 51.0
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.9e-165 585.1 697 50.6
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.1e-161 574.7 716 50.6
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.7e-159 567.4 724 50.4
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 3.8e-159 566.2 721 49.0
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 2.5e-158 563.5 720 48.6
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 9.4e-158 561.6 730 47.5
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.4e-156 557.8 523 61.6
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.0e-156 556.6 724 50.6
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 5.1e-156 555.8 716 50.7
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 6.7e-156 555.4 708 49.3
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 2.6e-155 553.5 735 47.2
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-154 551.2 721 50.1
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.8e-154 550.1 713 50.5
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 6.3e-154 548.9 792 46.5
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 9.1e-153 545.0 718 48.9
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 3.5e-152 543.1 722 47.9
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 5.9e-152 542.3 716 46.8
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.3e-151 541.2 721 47.3
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.9e-151 540.0 752 45.6
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.9e-150 537.3 713 46.3
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-150 536.6 717 49.9
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.2e-150 536.6 645 53.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.2e-149 534.6 736 47.0
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.1e-149 532.3 720 45.6
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.0e-149 531.9 711 46.3
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.4e-148 531.2 722 46.4
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 5.2e-148 529.3 722 46.3
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.1e-147 528.1 725 47.6
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 5.7e-147 525.8 837 44.3
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.1e-145 521.5 717 46.3
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 7.0e-145 518.8 717 46.9
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 8.5e-143 511.9 730 46.0
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 3.2e-142 510.0 740 45.8
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 5.5e-142 509.2 734 47.0
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 3.6e-141 506.5 635 49.1
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.6e-141 506.5 726 44.5
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 3.6e-141 506.5 715 46.0
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 8.0e-141 505.4 647 49.3
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.2e-140 502.7 720 44.7
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.3e-138 498.0 725 44.7
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.7e-138 497.7 734 44.8
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.2e-138 497.3 665 46.6
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 8.3e-138 495.4 720 45.4
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 7.0e-137 492.3 725 45.7
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 9.1e-137 491.9 787 42.2
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.0e-135 488.4 726 44.6
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.2e-135 487.3 913 39.1
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.1e-134 485.0 746 45.6
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.5e-134 484.6 715 46.2
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 3.2e-134 483.4 698 45.6
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.0e-132 476.9 716 44.4
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 4.0e-132 476.5 627 46.9
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.6e-131 473.8 749 45.1
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 6.3e-130 469.2 722 45.4
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-129 468.4 564 53.0
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.0e-129 465.7 787 40.5
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.4e-121 439.5 328 74.7
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 9.2e-121 438.7 653 43.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 6.6e-119 432.6 736 40.5
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 2.6e-115 420.6 707 41.6
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 4.9e-114 416.4 744 41.1
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 6.4e-114 416.0 673 43.2
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.4e-113 414.8 648 42.4
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.2e-112 411.8 711 39.1
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 2.0e-112 411.0 661 42.7
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 3.5e-112 410.2 672 43.0
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 3.9e-111 406.8 804 39.1
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.1e-110 405.2 645 41.2
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.5e-110 404.8 571 45.2
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.9e-110 404.4 687 40.5
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 5.2e-108 396.4 714 40.8
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.5e-107 394.8 664 42.0
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 2.0e-107 394.4 687 39.7
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.7e-106 391.3 727 37.6
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 4.1e-105 386.7 693 39.1
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.6e-104 384.8 688 39.5
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 7.8e-104 382.5 694 38.0
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.8e-104 382.5 582 44.5
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.9e-102 377.9 684 38.7
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.8e-101 374.0 692 38.3
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 6.2e-101 372.9 692 37.7
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 8.1e-101 372.5 694 38.0
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.3e-100 370.9 691 37.8
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 3.1e-100 370.5 873 33.2
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 3.4e-99 367.1 683 37.9
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.8e-99 366.3 736 39.1
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 7.6e-99 365.9 684 37.4
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 2.2e-98 364.4 579 41.6
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 6.4e-98 362.8 684 37.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.4e-97 361.7 693 36.7
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 1.9e-97 361.3 692 37.4
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.1e-96 357.8 725 38.1
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.1e-96 357.8 417 49.6
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 7.3e-94 349.4 689 36.9
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.1e-93 347.8 307 61.6
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 2.4e-92 344.4 580 39.8
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.8e-82 310.5 261 60.9
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.8e-79 301.6 414 46.6
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.7e-79 299.7 371 49.3
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 6.2e-77 293.1 339 52.8
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.1e-76 292.4 443 46.5
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.1e-76 292.4 625 36.8
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 5.8e-75 286.6 328 49.7
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.8e-74 283.9 307 54.4
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 6.2e-69 266.5 664 31.9
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 9.0e-68 262.7 436 43.6
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.6e-67 261.2 736 35.3
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 2.6e-67 261.2 276 50.0
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 4.5e-67 260.4 250 53.2
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.1e-57 229.2 495 38.6
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 6.7e-55 219.9 146 74.7
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 5.3e-52 210.3 142 76.1
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-46 192.2 198 57.1
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.1e-44 186.0 338 38.5
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 6.5e-42 176.8 210 49.5
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 7.4e-38 163.3 256 39.8
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.7e-34 152.1 381 31.8
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 7.2e-33 146.7 458 34.1
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.6e-32 144.4 207 43.0
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.6e-32 144.4 119 68.9
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.7e-30 137.1 153 58.2
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 6.5e-26 123.6 441 29.5
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 4.7e-24 117.5 130 58.5
TAR374G0267 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.4e-20 104.0 94 61.7
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.4e-20 104.0 67 76.1
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.1e-16 90.5 56 78.6
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.2e-15 87.4 344 31.1
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.4e-14 84.3 100 50.0
FAN06G0571 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-13 82.4 94 55.3
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 1.4e-12 79.3 156 35.9
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.1e-12 78.2 72 56.9
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.5e-11 74.3 157 35.0
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.6e-10 70.5 116 37.1
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.3e-09 67.8 87 48.3
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.3e-09 67.8 46 67.4
BraA01t01640Z Brassica rapa HOM05D002456 ORTHO05D002994 3.6e-08 64.7 197 34.0
CBR_g49744 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-06 57.0 65 49.2


User provided reference genes

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