Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 5.4e-246 854.0 456 100.0
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 2.1e-194 682.6 456 76.1
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 7.4e-187 657.5 456 74.1
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 3.9e-180 635.2 457 71.8
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 1.5e-176 623.2 426 73.7
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 2.9e-175 619.0 459 70.8
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 1.9e-174 616.3 456 70.2
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 1.9e-171 606.3 415 74.2
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 1.6e-170 603.2 395 76.7
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 1.3e-167 593.6 459 68.6
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 8.5e-167 590.9 539 60.9
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 5.1e-156 555.1 454 64.5
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.5e-155 553.5 456 65.6
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 1.5e-152 543.5 459 63.0
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 4.5e-152 542.0 391 69.6
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 1.0e-151 540.8 457 64.8
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 6.5e-151 538.1 457 64.3
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 2.5e-150 536.2 428 66.6
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 1.2e-149 533.9 432 65.7
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 1.7e-146 523.5 400 67.5
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 2.4e-145 519.6 354 73.7
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 1.6e-144 516.9 378 70.6
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 2.5e-142 509.6 420 62.6
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 6.1e-141 505.0 393 65.4
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 1.2e-139 500.7 389 66.1
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 2.8e-138 496.1 385 64.4
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 4.8e-138 495.4 395 63.5
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 5.0e-135 485.3 426 58.7
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 4.7e-133 478.8 389 62.5
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 3.0e-132 476.1 392 63.8
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 4.8e-130 468.8 393 60.6
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 1.9e-126 456.8 398 62.3
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 3.3e-126 456.1 433 56.6
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 6.1e-125 451.8 369 63.1
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 3.0e-124 449.5 411 57.4
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 2.9e-119 433.0 392 57.7
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 2.8e-117 426.4 421 56.1
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 1.7e-114 417.2 395 56.2
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 3.7e-114 416.0 395 55.2
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 6.0e-112 408.7 419 53.0
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 6.0e-112 408.7 402 55.2
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 1.5e-110 404.1 312 67.0
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 2.1e-109 400.2 352 59.7
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 2.0e-99 367.1 292 63.7
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 7.8e-96 355.1 430 46.7
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 1.1e-92 344.7 433 42.7
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 3.5e-80 303.1 356 49.4
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 8.1e-77 292.0 307 50.8
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 3.5e-72 276.6 261 55.6
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 5.6e-62 242.7 251 49.8
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 3.8e-42 176.8 205 47.3
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 1.1e-36 158.7 195 48.2
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 4.2e-33 146.7 100 72.0
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 9.4e-33 145.6 127 55.9
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 9.7e-30 135.6 133 57.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 6.8e-15 86.3 92 54.3
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 6.3e-13 79.7 62 59.7
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 8.3e-13 79.3 51 76.5
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 1.8e-12 78.2 72 52.8
SEGI_08901 Sequoiadendron giganteum HOM05D008311 ORTHO05D384408 8.9e-07 59.3 57 47.4


User provided reference genes

Program Settings