Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0034 Trochodendron aralioides HOM05D005433 ORTHO05D006675 9.2e-75 283.5 146 100.0
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 6.7e-17 91.3 81 67.9
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 3.1e-14 82.4 81 58.0
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 9.1e-14 80.9 80 57.5
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 1.2e-13 80.5 81 56.8
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 2.0e-13 79.7 73 63.0
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 1.7e-12 76.6 76 56.6
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 1.7e-12 76.6 74 59.5
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.9e-12 75.9 78 53.8
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.8e-12 75.5 78 53.8
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 3.8e-12 75.5 78 53.8
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 5.0e-12 75.1 82 56.1
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 8.5e-12 74.3 57 66.7
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 3.2e-11 72.4 77 53.2
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 5.5e-11 71.6 81 51.9
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 1.6e-10 70.1 70 58.6
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 1.6e-10 70.1 75 57.3
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.6e-10 70.1 81 50.6
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 2.7e-10 69.3 78 55.1
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 2.7e-10 69.3 71 53.5
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 4.7e-10 68.6 82 53.7
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 6.1e-10 68.2 77 54.5
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 6.1e-10 68.2 81 51.9
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 8.0e-10 67.8 80 53.8
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 1.0e-09 67.4 75 53.3
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 1.0e-09 67.4 81 51.9
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 1.4e-09 67.0 80 52.5
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 1.4e-09 67.0 50 68.0
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 2.3e-09 66.2 81 53.1
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 2.3e-09 66.2 81 50.6
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 5.2e-09 65.1 81 48.1
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 5.2e-09 65.1 76 52.6
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 5.2e-09 65.1 79 46.8
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 5.2e-09 65.1 83 51.8
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 6.7e-09 64.7 78 51.3
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 6.7e-09 64.7 81 53.1
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 1.2e-08 63.9 78 52.6
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.2e-08 63.9 76 51.3
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 1.2e-08 63.9 76 51.3
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.2e-08 63.9 82 53.7
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.5e-08 63.5 57 56.1
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 2.0e-08 63.2 40 77.5
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 2.0e-08 63.2 80 50.0
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 2.0e-08 63.2 80 48.8
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 2.6e-08 62.8 81 51.9
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.3e-08 62.4 55 56.4
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.4e-08 62.0 66 50.0
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 4.4e-08 62.0 55 56.4
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 4.4e-08 62.0 79 49.4
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 5.7e-08 61.6 82 50.0
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 5.7e-08 61.6 80 50.0
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 5.7e-08 61.6 78 50.0
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 5.7e-08 61.6 78 50.0
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 7.5e-08 61.2 67 50.7
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 9.7e-08 60.8 74 47.3
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 9.7e-08 60.8 81 49.4
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.3e-07 60.5 81 51.9
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.3e-07 60.5 81 51.9
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.3e-07 60.5 77 50.6
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 1.3e-07 60.5 79 46.8
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 1.3e-07 60.5 79 46.8
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 1.7e-07 60.1 84 53.6
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 1.7e-07 60.1 82 50.0
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 2.2e-07 59.7 72 43.1
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 2.2e-07 59.7 77 48.1
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 2.8e-07 59.3 73 45.2
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 2.8e-07 59.3 81 49.4
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 2.8e-07 59.3 81 49.4
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 2.8e-07 59.3 40 65.0
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 3.7e-07 58.9 78 46.2
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 3.7e-07 58.9 77 48.1
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 4.8e-07 58.5 73 47.9
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 6.3e-07 58.2 63 55.6
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 6.3e-07 58.2 78 46.2
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 6.3e-07 58.2 71 46.5
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 8.2e-07 57.8 61 50.8
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.1e-06 57.4 78 46.2
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.4e-06 57.0 78 44.9
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.8e-06 56.6 78 44.9
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.8e-06 56.6 81 48.1
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.4e-06 56.2 78 44.9
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 4.1e-06 55.5 63 50.8
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 4.1e-06 55.5 63 50.8
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 5.3e-06 55.1 78 44.9
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 5.3e-06 55.1 69 47.8
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 9.1e-06 54.3 75 46.7
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 9.1e-06 54.3 73 39.7
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 9.1e-06 54.3 82 48.8
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 9.1e-06 54.3 78 41.0


User provided reference genes

Program Settings