Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 3.7e-187 657.9 303 100.0
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 3.1e-157 558.5 303 81.8
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 1.1e-151 540.0 300 79.7
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 9.6e-151 537.0 302 78.5
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 6.9e-149 530.8 302 78.8
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 7.6e-148 527.3 302 77.8
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 2.2e-147 525.8 304 77.6
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 2.2e-147 525.8 302 78.8
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 2.9e-147 525.4 309 76.7
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 9.3e-146 520.4 302 78.8
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 9.3e-146 520.4 309 76.4
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 1.0e-144 516.9 302 76.2
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 1.3e-144 516.5 305 76.4
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 1.8e-144 516.2 300 76.7
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 3.0e-144 515.4 302 77.2
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 1.1e-143 513.5 302 75.2
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 1.5e-143 513.1 302 74.8
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.5e-143 513.1 302 75.8
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 1.9e-143 512.7 304 75.7
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 2.5e-143 512.3 302 75.5
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.5e-143 512.3 302 75.5
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 3.7e-142 508.4 300 76.0
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 3.1e-141 505.4 302 73.8
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 9.0e-141 503.8 300 73.7
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 1.5e-140 503.1 300 73.0
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 2.6e-140 502.3 304 73.0
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 7.6e-140 500.7 340 69.7
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 1.0e-139 500.4 302 74.2
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 1.7e-139 499.6 304 73.4
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 5.0e-139 498.0 302 72.5
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 1.1e-138 496.9 300 74.3
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 1.9e-138 496.1 345 65.5
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 5.5e-138 494.6 302 72.8
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 1.2e-137 493.4 304 71.7
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 1.6e-137 493.0 284 78.5
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 4.6e-137 491.5 300 73.0
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 1.0e-136 490.3 302 71.9
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 1.3e-136 490.0 302 72.2
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 1.3e-136 490.0 302 71.9
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 3.0e-136 488.8 300 72.7
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 3.0e-136 488.8 300 73.3
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 3.1e-133 478.8 302 70.5
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 9.1e-133 477.2 302 69.2
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 1.5e-132 476.5 304 70.4
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 2.6e-132 475.7 354 63.3
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 3.4e-132 475.3 319 68.0
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 1.0e-131 473.8 302 67.9
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 3.2e-130 468.8 274 74.8
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 1.0e-128 463.8 302 67.9
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 3.9e-128 461.8 301 71.4
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.5e-124 449.9 303 65.0
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 2.0e-124 449.5 265 75.5
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 9.4e-122 440.7 302 66.9
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 1.0e-120 437.2 285 71.2
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 3.9e-120 435.3 288 64.6
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 3.3e-119 432.2 253 77.1
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.2e-118 429.5 252 77.4
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 1.1e-117 427.2 288 65.3
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 1.4e-117 426.8 288 65.3
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 1.7e-115 419.9 305 65.6
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.4e-112 410.2 287 67.9
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.2e-111 407.1 303 61.1
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 2.0e-111 406.4 303 64.4
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 9.7e-111 404.1 302 64.6
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 1.7e-110 403.3 235 78.7
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 1.8e-109 399.8 298 60.1
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 1.0e-104 384.0 303 55.4
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 7.5e-103 377.9 240 68.8
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 6.3e-102 374.8 303 56.1
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 4.7e-97 358.6 301 54.5
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 6.4e-86 321.6 238 63.4
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 7.3e-66 255.0 328 41.5
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 2.4e-64 250.0 137 78.8
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 9.6e-58 228.0 328 37.8
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 2.1e-52 210.3 120 75.8
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 1.1e-48 198.0 127 66.9
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 9.0e-48 194.9 120 72.5
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 1.3e-43 181.0 120 62.5
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 1.3e-35 154.5 137 54.7
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 9.3e-29 131.7 281 33.5
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 1.0e-27 128.3 85 68.2
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 7.4e-26 122.1 89 66.3
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 4.2e-21 106.3 85 57.6
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 6.7e-19 99.0 60 71.7
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 1.1e-16 91.7 130 40.0
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 1.3e-09 68.2 44 65.9
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 4.8e-09 66.2 43 72.1
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 8.2e-09 65.5 41 65.9


User provided reference genes

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