Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1722 Trochodendron aralioides HOM05D000068 ORTHO05D001847 1.3e-146 523.1 267 100.0
TAR623G0037 Trochodendron aralioides HOM05D000221 ORTHO05D000346 2.5e-17 93.6 102 55.9
TAR628G1100 Trochodendron aralioides HOM05D000068 ORTHO05D008806 2.3e-15 87.0 70 61.4
Atru.chr4.896 Acer truncatum HOM05D000068 ORTHO05D008806 1.3e-13 81.3 42 85.7
Nn5g28550 Nelumbo nucifera HOM05D000068 ORTHO05D008806 1.3e-13 81.3 58 63.8
PSO541G5701 Papaver somniferum HOM05D000068 ORTHO05D008806 1.3e-13 81.3 58 65.5
Glyma.06G153500 Glycine max HOM05D000068 ORTHO05D008806 1.7e-13 80.9 129 42.6
TAR383G0227 Trochodendron aralioides HOM05D001903 ORTHO05D001847 1.7e-13 80.9 84 61.9
Ciclev10002190m.g Citrus clementina HOM05D000068 ORTHO05D008806 2.8e-13 80.1 42 88.1
FvH4_5g28750 Fragaria vesca HOM05D000068 ORTHO05D008806 2.8e-13 80.1 58 63.8
FAN04G2941 Fragaria x ananassa HOM05D000068 ORTHO05D008806 2.8e-13 80.1 58 63.8
FAN13G1326 Fragaria x ananassa HOM05D000068 ORTHO05D008806 2.8e-13 80.1 58 63.8
FAN18G4213 Fragaria x ananassa HOM05D000068 ORTHO05D008806 2.8e-13 80.1 58 63.8
QL10p043601 Quercus lobata HOM05D000068 ORTHO05D008806 2.8e-13 80.1 58 63.8
RcHm_v2.0_Chr7g0220961 Rosa chinensis HOM05D000068 ORTHO05D008806 2.8e-13 80.1 58 63.8
EL10Ac6g15308 Beta vulgaris HOM05D000068 ORTHO05D008806 3.7e-13 79.7 58 63.8
Ca_16947_v3 Cicer arietinum L. HOM05D000068 ORTHO05D008806 6.3e-13 79.0 57 68.4
Ca_16966_v3 Cicer arietinum L. HOM05D000068 ORTHO05D008806 6.3e-13 79.0 57 68.4
Manes.13G087200 Manihot esculenta HOM05D000068 ORTHO05D008806 6.3e-13 79.0 58 63.8
Sabra05G0052100 Salix brachista HOM05D002517 ORTHO05D003040 6.3e-13 79.0 65 60.0
Potri.005G062800 Populus trichocarpa HOM05D000068 ORTHO05D008806 8.3e-13 78.6 52 67.3
PSO675G5753 Papaver somniferum HOM05D000068 ORTHO05D008806 1.1e-12 78.2 58 63.8
Rhsim10G0134600 Rhododendron simsii HOM05D000068 ORTHO05D008806 1.1e-12 78.2 58 63.8
GSVIVG01026484001 Vitis vinifera HOM05D002517 ORTHO05D003040 1.1e-12 78.2 58 62.1
Aqoxy6G00369 Aquilegia oxysepala HOM05D000068 ORTHO05D008806 1.4e-12 77.8 58 63.8
CSS0043141 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008806 1.8e-12 77.4 61 60.7
Thhalv10025967m.g Eutrema salsugineum HOM05D000068 ORTHO05D008806 1.8e-12 77.4 66 54.5
Medtr3g096300 Medicago truncatula HOM05D000068 ORTHO05D008806 1.8e-12 77.4 57 66.7
Medtr8g442660 Medicago truncatula HOM05D000068 ORTHO05D008806 1.8e-12 77.4 57 66.7
Psat5g062760 Pisum sativum HOM05D000068 ORTHO05D008806 1.8e-12 77.4 57 66.7
Prupe.8G020300 Prunus persica HOM05D000068 ORTHO05D008806 1.8e-12 77.4 58 62.1
HPP92_013930 Vanilla planifolia HOM05D000068 ORTHO05D008806 1.8e-12 77.4 58 62.1
AUR62003562 Chenopodium quinoa HOM05D000068 ORTHO05D008806 3.1e-12 76.6 58 62.1
AUR62017876 Chenopodium quinoa HOM05D000068 ORTHO05D008806 3.1e-12 76.6 58 62.1
Dinv24362 Davidia involucrata HOM05D000068 ORTHO05D008806 3.1e-12 76.6 58 62.1
Haze_25233 Corylus avellana HOM05D000068 ORTHO05D008806 4.1e-12 76.3 58 62.1
Lj1g0020952 Lotus japonicus HOM05D000068 ORTHO05D008806 4.1e-12 76.3 58 62.1
Sp7g31160 Schrenkiella parvula HOM05D000068 ORTHO05D008806 4.1e-12 76.3 66 53.0
TAR626G1723 Trochodendron aralioides HOM05D001903 ORTHO05D001847 4.1e-12 76.3 66 65.2
BcaC09g52159 Brassica carinata HOM05D000068 ORTHO05D008806 5.4e-12 75.9 62 56.5
DCAR_014337 Daucus carota HOM05D000068 ORTHO05D008806 5.4e-12 75.9 61 60.7
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 7.0e-12 75.5 61 59.0
Lalb_Chr11g0068451 Lupinus albus HOM05D000068 ORTHO05D008806 7.0e-12 75.5 57 63.2
PGR102G3263 Punica granatum HOM05D000068 ORTHO05D008806 7.0e-12 75.5 73 52.1
MD10G1016500 Malus domestica HOM05D000068 ORTHO05D008806 9.1e-12 75.1 58 60.3
Cpa.g.sc42.158 Carica papaya HOM05D000068 ORTHO05D008806 1.2e-11 74.7 42 78.6
Gohir.A05G384700 Gossypium hirsutum HOM05D000068 ORTHO05D008806 1.2e-11 74.7 42 76.2
Gohir.D04G030800 Gossypium hirsutum HOM05D000068 ORTHO05D008806 1.2e-11 74.7 42 76.2
Gorai.012G035000 Gossypium raimondii HOM05D000068 ORTHO05D008806 1.2e-11 74.7 42 76.2
TAR626G0355 Trochodendron aralioides HOM05D001903 ORTHO05D001847 1.2e-11 74.7 66 63.6
CANSAT01G0584 Cannabis sativa HOM05D000068 ORTHO05D008806 1.6e-11 74.3 58 58.6
Eucgr.H04964 Eucalyptus grandis HOM05D000068 ORTHO05D008806 1.6e-11 74.3 42 78.6
MBI18_g24470_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D008806 1.6e-11 74.3 58 62.1
A01p04820 Brassica napus HOM05D000068 ORTHO05D008806 2.0e-11 73.9 62 54.8
BraA01t00465Z Brassica rapa HOM05D000068 ORTHO05D008806 2.0e-11 73.9 62 54.8
TPR.G28227 Trifolium pratense HOM05D000068 ORTHO05D008806 2.0e-11 73.9 42 81.0
ATR0624G077 Amborella trichopoda HOM05D000068 ORTHO05D008806 2.7e-11 73.6 42 78.6
C01p05230 Brassica napus HOM05D000068 ORTHO05D008806 2.7e-11 73.6 62 53.2
BolC1t00502H Brassica oleracea HOM05D000068 ORTHO05D008806 2.7e-11 73.6 62 53.2
Thecc.01G131800 Theobroma cacao HOM05D000068 ORTHO05D008806 2.7e-11 73.6 42 73.8
CARHR241520 Cardamine hirsuta HOM05D000068 ORTHO05D008806 3.5e-11 73.2 61 55.7
HanXRQChr13g0410651 Helianthus annuus HOM05D000068 ORTHO05D008806 3.5e-11 73.2 58 56.9
THA.LOC104807155 Tarenaya hassleriana HOM05D000068 ORTHO05D008806 3.5e-11 73.2 61 59.0
CiPaw.04G082400 Carya illinoinensis HOM05D000068 ORTHO05D008806 4.5e-11 72.8 58 58.6
Duzib147G0127 Durio zibethinus HOM05D000068 ORTHO05D008806 4.5e-11 72.8 42 73.8
Phvul.009G150700 Phaseolus vulgaris HOM05D000068 ORTHO05D008806 4.5e-11 72.8 50 74.0
arahy.Tifrunner.gnm1.ann1.83XS31 Arachis hypogaea HOM05D000068 ORTHO05D008806 5.9e-11 72.4 58 58.6
COL.COLO4_35740 Corchorus olitorius HOM05D000068 ORTHO05D008806 5.9e-11 72.4 42 73.8
Hma1.2p1_0476F.1_g160870 Hydrangea macrophylla HOM05D000068 ORTHO05D008806 5.9e-11 72.4 41 78.0
Os01g0770500 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D008806 7.7e-11 72.0 57 61.4
VMungo1309G2028 Vigna mungo HOM05D000068 ORTHO05D008806 7.7e-11 72.0 50 74.0
AL7G18110 Arabidopsis lyrata HOM05D000068 ORTHO05D008806 1.0e-10 71.6 61 54.1
AT4G33460 Arabidopsis thaliana HOM05D000068 ORTHO05D008806 1.0e-10 71.6 61 54.1
Nn2g12060 Nelumbo nucifera HOM05D001903 ORTHO05D001847 1.0e-10 71.6 69 59.4
Hund04412 Selenicereus undatus HOM05D000068 ORTHO05D008806 1.0e-10 71.6 58 56.9
Lj2C606G6 Lonicera japonica HOM05D000068 ORTHO05D008806 1.3e-10 71.2 58 56.9
Lsat_1_v5_gn_9_89500 Lactuca sativa HOM05D000068 ORTHO05D008806 1.7e-10 70.9 58 56.9
Carub.0007s0703 Capsella rubella HOM05D000068 ORTHO05D008806 2.2e-10 70.5 61 54.1
CDE08G1570 Ceratophyllum demersum HOM05D000068 ORTHO05D008806 2.2e-10 70.5 58 55.2
PGSC0003DMG400008062 Solanum tuberosum HOM05D000068 ORTHO05D008806 2.9e-10 70.1 42 71.4
MELO3C023222.2 Cucumis melo HOM05D000068 ORTHO05D008806 3.8e-10 69.7 42 76.2
CsaV3_2G019520 Cucumis sativus L. HOM05D006783 ORTHO05D008330 3.8e-10 69.7 42 76.2
Peaxi162Scf00270g01114 Petunia axillaris HOM05D000068 ORTHO05D008806 3.8e-10 69.7 42 71.4
Solyc11g069260.2 Solanum lycopersicum HOM05D000068 ORTHO05D008806 3.8e-10 69.7 42 71.4
Sopen11g027990 Solanum pennellii HOM05D000068 ORTHO05D008806 3.8e-10 69.7 42 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3399 Anthoceros agrestis HOM05D000068 ORTHO05D008806 5.0e-10 69.3 57 61.4
ClCG02G000320 Citrullus lanatus HOM05D000068 ORTHO05D008806 5.0e-10 69.3 42 76.2
SalBow2G0003 Salvia bowleyana HOM05D000068 ORTHO05D008806 6.5e-10 68.9 58 53.4
ECA240G0800 Erigeron canadensis HOM05D000068 ORTHO05D008806 8.5e-10 68.6 42 71.4
TAR636G0973 Trochodendron aralioides HOM05D001903 ORTHO05D001847 8.5e-10 68.6 64 59.4
arahy.Tifrunner.gnm1.ann1.5B35UI Arachis hypogaea HOM05D000068 ORTHO05D008806 1.1e-09 68.2 66 53.0
vmacro12800 Vaccinium macrocarpon HOM05D000068 ORTHO05D008806 1.1e-09 68.2 61 59.0
CAN.G631.13 Capsicum annuum HOM05D000068 ORTHO05D008806 1.5e-09 67.8 42 69.0
Migut.B00255 Erythranthe guttata HOM05D000068 ORTHO05D008806 1.5e-09 67.8 58 53.4
Oeu042293.1 Olea europaea HOM05D000068 ORTHO05D008806 1.5e-09 67.8 42 69.0
SalBow6G1059 Salvia bowleyana HOM05D000068 ORTHO05D008806 1.5e-09 67.8 58 53.4
SalBow6G3488 Salvia bowleyana HOM05D000068 ORTHO05D008806 1.5e-09 67.8 58 53.4
MSTRG.20097 Avicennia marina HOM05D000068 ORTHO05D008806 3.2e-09 66.6 42 71.4
Sed0026696 Sechium edule HOM05D000068 ORTHO05D008806 3.2e-09 66.6 42 73.8
Mapoly0113s0007 Marchantia polymorpha HOM05D000068 ORTHO05D008806 4.2e-09 66.2 42 69.0
Nitab4.5_0010225g0030 Nicotiana tabacum HOM05D000068 ORTHO05D008806 4.2e-09 66.2 42 69.0
Pp3c3_29910 Physcomitrium patens HOM05D000068 ORTHO05D008806 4.2e-09 66.2 60 53.3
unitig_61.g25997 Utricularia gibba HOM05D000068 ORTHO05D008806 5.5e-09 65.9 42 66.7
SGA_v2.0_scaffold32G13151 Striga asiatica HOM05D000068 ORTHO05D008806 9.4e-09 65.1 42 66.7
Sc16g0003810 Simmondsia chinensis HOM05D000068 ORTHO05D008806 1.6e-08 64.3 75 48.0
Cre03.g164150 Chlamydomonas reinhardtii HOM05D000068 ORTHO05D008806 3.6e-08 63.2 61 52.5
Nn8g39477 Nelumbo nucifera HOM05D001903 ORTHO05D001847 4.7e-08 62.8 64 53.1
Cc07_g18510 Coffea canephora HOM05D000068 ORTHO05D008806 6.1e-08 62.4 42 66.7
TAR625G1235 Trochodendron aralioides HOM05D001903 ORTHO05D001847 8.0e-08 62.0 59 55.9
SMO147G0198 Selaginella moellendorffii HOM05D000068 ORTHO05D008806 5.2e-07 59.3 85 48.2
MCO05G724 Micromonas commoda HOM05D000068 ORTHO05D008806 6.8e-07 58.9 47 53.2
Duzib187G1121 Durio zibethinus HOM05D001903 ORTHO05D001847 3.4e-06 56.6 67 52.2
Duzib168G0350 Durio zibethinus HOM05D001903 ORTHO05D001847 4.4e-06 56.2 67 49.3
Cpa.g.sc46.11 Carica papaya HOM05D001903 ORTHO05D001847 9.8e-06 55.1 69 50.7


User provided reference genes

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