Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 9.6e-206 719.9 362 100.0
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 1.5e-166 589.7 345 84.9
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 7.4e-166 587.4 345 84.6
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.4e-164 583.2 350 82.6
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 2.4e-164 582.4 343 84.0
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 5.9e-163 577.8 339 84.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 7.7e-163 577.4 348 81.6
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.5e-162 574.3 347 80.7
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.2e-161 572.0 351 80.6
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 5.5e-161 571.2 352 83.0
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 3.6e-160 568.5 348 80.2
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.7e-160 568.2 347 81.0
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 7.9e-160 567.4 348 80.7
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.0e-159 567.0 354 80.2
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.0e-159 567.0 348 80.7
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.8e-159 566.2 343 81.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.1e-158 563.5 343 80.2
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 2.0e-158 562.8 344 80.5
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 2.6e-158 562.4 343 80.5
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.6e-158 562.4 342 81.0
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 4.4e-158 561.6 344 80.2
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 4.4e-158 561.6 343 81.0
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 7.4e-158 560.8 349 80.8
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 9.7e-158 560.5 343 80.2
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 9.7e-158 560.5 341 81.2
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.7e-157 559.7 339 81.7
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 2.2e-157 559.3 335 81.5
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 6.3e-157 557.8 356 78.4
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.8e-156 556.2 344 80.5
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 4.1e-156 555.1 347 79.5
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 4.1e-156 555.1 347 77.2
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 7.0e-156 554.3 344 77.3
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.2e-155 553.5 347 79.5
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.6e-155 552.4 353 77.9
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.5e-155 551.6 343 78.4
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 7.7e-155 550.8 341 77.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.0e-154 550.4 349 79.7
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.3e-154 550.1 341 79.8
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 3.8e-154 548.5 340 77.6
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 3.8e-154 548.5 341 78.9
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.5e-153 545.8 340 76.8
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 3.2e-153 545.4 350 78.0
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.2e-153 545.4 343 78.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 5.5e-153 544.7 347 76.7
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 7.2e-153 544.3 336 78.0
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 9.4e-153 543.9 328 77.4
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.2e-152 543.5 340 75.9
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.1e-152 542.7 349 78.8
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.7e-152 541.6 340 79.1
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 6.1e-152 541.2 343 76.4
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.0e-151 540.4 342 77.5
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.8e-151 539.7 334 79.6
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.0e-151 538.9 345 75.4
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 4.0e-151 538.5 338 78.4
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.2e-150 537.0 346 77.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 2.0e-150 536.2 346 76.6
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 4.4e-150 535.0 342 75.4
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.3e-149 533.5 353 74.5
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.3e-149 533.5 345 75.1
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 4.8e-149 531.6 342 75.1
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 4.8e-149 531.6 342 75.1
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 6.3e-149 531.2 342 75.1
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.1e-148 530.4 320 79.7
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.4e-148 529.3 343 76.4
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 3.1e-148 528.9 346 75.4
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.1e-148 528.9 306 84.3
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 5.3e-148 528.1 346 75.7
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 5.3e-148 528.1 342 74.9
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 7.0e-148 527.7 344 75.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 2.7e-147 525.8 342 74.3
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.5e-147 525.4 346 74.9
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 5.9e-147 524.6 344 77.9
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.1e-145 520.4 344 75.0
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.1e-145 520.4 338 75.1
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.9e-145 519.6 391 66.5
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.2e-145 518.8 376 71.8
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 4.0e-143 511.9 349 75.6
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.2e-142 510.4 342 72.8
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.2e-141 506.1 341 75.1
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.4e-140 503.4 341 72.7
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 3.5e-139 498.8 351 70.7
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.2e-138 496.1 350 70.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 1.6e-131 473.4 319 70.5
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 7.8e-131 471.1 327 68.5
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.1e-129 467.2 334 68.0
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.8e-128 462.6 263 85.6
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.7e-128 461.8 339 70.8
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 4.3e-121 438.7 256 84.0
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 9.8e-118 427.6 311 65.6
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.7e-117 426.8 341 66.0
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 3.2e-116 422.5 531 49.9
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.2e-116 421.0 392 58.2
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.6e-115 420.2 334 67.4
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.6e-115 418.7 343 64.4
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 9.5e-113 411.0 247 84.2
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 4.4e-110 402.1 229 85.6
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 9.2e-108 394.4 343 64.1
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 3.0e-106 389.4 222 86.0
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 9.3e-92 341.3 190 84.7
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 4.6e-83 312.4 360 50.6
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.4e-79 300.8 163 83.4
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 7.1e-76 288.5 177 81.4
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.3e-69 267.7 397 39.0
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 6.5e-69 265.4 217 58.5
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.2e-61 240.4 131 84.7
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 2.9e-61 240.0 319 42.6
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.5e-54 216.1 127 80.3
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 7.9e-51 205.3 348 38.8
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 4.8e-48 196.1 354 35.6
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.2e-45 187.2 126 70.6
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.3e-41 173.3 97 86.6
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 8.2e-40 168.7 103 73.8
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 6.5e-37 159.1 84 88.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 7.2e-28 129.0 83 72.3
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.2e-25 121.7 61 88.5
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.2e-17 95.1 76 61.8
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.8e-16 90.5 56 87.5
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.1e-11 74.3 44 70.5
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 6.4e-08 62.8 64 51.6
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 3.2e-07 60.5 165 29.1
Cc11_g11300 Coffea canephora HOM05D003438 ORTHO05D004235 3.5e-06 57.0 307 23.5
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 6.0e-06 56.2 30 83.3


User provided reference genes

Program Settings