Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1619 Trochodendron aralioides HOM05D000325 ORTHO05D000583 1.3e-135 486.5 267 100.0
TAR628G1362 Trochodendron aralioides HOM05D000325 ORTHO05D000583 1.4e-129 466.5 267 95.5
TAR628G0208 Trochodendron aralioides HOM05D000325 ORTHO05D000583 2.8e-122 442.2 267 88.4
TAR381G0770 Trochodendron aralioides HOM05D000325 ORTHO05D000583 2.6e-75 286.2 268 62.7
Prupe.8G049000 Prunus persica HOM05D000325 ORTHO05D000583 3.8e-50 202.6 267 48.7
Nn1g05203 Nelumbo nucifera HOM05D000325 ORTHO05D000583 1.1e-49 201.1 241 57.3
Dinv44715 Davidia involucrata HOM05D000325 ORTHO05D000583 5.1e-47 192.2 264 51.5
Dinv13074 Davidia involucrata HOM05D000325 ORTHO05D000583 6.9e-44 181.8 269 48.3
CANSAT25G1187 Cannabis sativa HOM05D000325 ORTHO05D000583 1.7e-42 177.2 269 50.2
Haze_17882 Corylus avellana HOM05D000325 ORTHO05D000583 3.8e-42 176.0 293 46.4
PSO210G5173 Papaver somniferum HOM05D000325 ORTHO05D000583 1.9e-41 173.7 271 48.0
PSO447G0148 Papaver somniferum HOM05D000325 ORTHO05D000583 2.5e-41 173.3 271 48.0
MD00G1078400 Malus domestica HOM05D000325 ORTHO05D000583 7.2e-41 171.8 264 47.7
Duzib211G0208 Durio zibethinus HOM05D000325 ORTHO05D000583 2.7e-40 169.9 267 46.1
Atru.chr13.1887 Acer truncatum HOM05D000325 ORTHO05D000583 4.6e-40 169.1 249 49.0
CSS0040428 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 1.4e-39 167.5 264 46.6
CiPaw.15G007100 Carya illinoinensis HOM05D000325 ORTHO05D000583 1.4e-39 167.5 273 46.2
QL02p034859 Quercus lobata HOM05D000325 ORTHO05D000583 1.5e-38 164.1 271 48.0
Nn5g28949 Nelumbo nucifera HOM05D000325 ORTHO05D000583 7.4e-38 161.8 254 47.2
Duzib116G0729 Durio zibethinus HOM05D000325 ORTHO05D000583 2.2e-37 160.2 274 46.0
MD10G1043300 Malus domestica HOM05D000325 ORTHO05D000583 1.1e-36 157.9 326 39.3
RcHm_v2.0_Chr6g0272921 Rosa chinensis HOM05D000325 ORTHO05D000583 1.8e-36 157.1 304 40.5
Hma1.2p1_1088F.1_g255560 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 1.2e-35 154.5 283 43.1
Thecc.08G198200 Theobroma cacao HOM05D000325 ORTHO05D000583 2.0e-35 153.7 268 47.8
CiPaw.16G005900 Carya illinoinensis HOM05D000325 ORTHO05D000583 1.7e-34 150.6 266 40.6
Potri.013G117100 Populus trichocarpa HOM05D000325 ORTHO05D000583 2.5e-33 146.7 304 37.2
Ciclev10000853m.g Citrus clementina HOM05D000325 ORTHO05D000583 3.2e-33 146.4 265 44.2
FvH4_2g12480 Fragaria vesca HOM05D000325 ORTHO05D000583 7.2e-33 145.2 267 44.2
FAN24G2200 Fragaria x ananassa HOM05D000325 ORTHO05D000583 7.2e-33 145.2 267 43.1
Lj4A110G75 Lonicera japonica HOM05D000325 ORTHO05D000583 7.2e-33 145.2 269 46.8
Manes.02G187600 Manihot esculenta HOM05D000325 ORTHO05D000583 2.1e-32 143.7 264 42.8
Manes.18G097500 Manihot esculenta HOM05D000325 ORTHO05D000583 2.1e-32 143.7 264 42.4
Gohir.A06G109400 Gossypium hirsutum HOM05D000325 ORTHO05D000583 6.1e-32 142.1 267 43.8
FAN20G2075 Fragaria x ananassa HOM05D000325 ORTHO05D000583 7.9e-32 141.7 266 43.2
FAN27G3024 Fragaria x ananassa HOM05D000325 ORTHO05D000583 1.0e-31 141.4 266 43.6
FAN15G1419 Fragaria x ananassa HOM05D000325 ORTHO05D000583 1.4e-31 141.0 266 44.0
MBI05_g01283_MAGBIO Magnolia biondii HOM05D000325 ORTHO05D000583 3.0e-31 139.8 261 41.4
Cpa.g.sc66.122 Carica papaya HOM05D000325 ORTHO05D000583 5.1e-31 139.0 265 43.0
CSS0031658 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 3.3e-30 136.3 232 46.6
Sabra13G0099200 Salix brachista HOM05D000325 ORTHO05D000583 1.7e-29 134.0 326 33.4
Cc10_g06150 Coffea canephora HOM05D000325 ORTHO05D000583 3.7e-29 132.9 269 40.5
Hma1.2p1_2822F.1_g329040 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 2.0e-27 127.1 282 34.0
Peaxi162Scf00267g01222 Petunia axillaris HOM05D000325 ORTHO05D000583 2.6e-27 126.7 268 40.3
Gorai.009G261900 Gossypium raimondii HOM05D000325 ORTHO05D000583 5.9e-27 125.6 252 41.3
Gohir.A05G248700 Gossypium hirsutum HOM05D000325 ORTHO05D000583 1.0e-26 124.8 260 40.8
Gohir.D05G250500 Gossypium hirsutum HOM05D000325 ORTHO05D000583 2.2e-26 123.6 252 40.9
vmacro21209 Vaccinium macrocarpon HOM05D000325 ORTHO05D000583 2.9e-26 123.2 242 43.4
Rhsim06G0087600 Rhododendron simsii HOM05D000325 ORTHO05D000583 7.2e-25 118.6 253 41.1
Solyc04g072560.3 Solanum lycopersicum HOM05D000325 ORTHO05D000583 9.4e-25 118.2 271 37.3
Glyma.16G157900 Glycine max HOM05D000325 ORTHO05D000583 4.7e-24 115.9 253 37.9
Glyma.02G075900 Glycine max HOM05D000325 ORTHO05D000583 8.0e-24 115.2 255 40.8
VMungo0464G0878 Vigna mungo HOM05D000325 ORTHO05D000583 8.0e-24 115.2 212 41.5
Potri.019G087400 Populus trichocarpa HOM05D000325 ORTHO05D000583 1.8e-23 114.0 305 33.1
Nitab4.5_0000553g0100 Nicotiana tabacum HOM05D000325 ORTHO05D000583 2.3e-23 113.6 275 37.8
CAN.G1010.19 Capsicum annuum HOM05D000325 ORTHO05D000583 3.0e-23 113.2 268 38.1
PGSC0003DMG400027555 Solanum tuberosum HOM05D000325 ORTHO05D000583 4.0e-23 112.8 270 37.4
Ca_04515_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 5.2e-23 112.5 267 40.4
Sopen04g028760 Solanum pennellii HOM05D000325 ORTHO05D000583 6.7e-23 112.1 270 35.6
Nitab4.5_0001307g0110 Nicotiana tabacum HOM05D000325 ORTHO05D000583 8.8e-23 111.7 275 37.1
Aqoxy5G01982 Aquilegia oxysepala HOM05D000325 ORTHO05D000583 2.0e-22 110.5 297 37.0
TWI32G0264 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 5.7e-22 109.0 318 35.5
Lj2g0001824 Lotus japonicus HOM05D000325 ORTHO05D000583 7.5e-22 108.6 267 40.8
Gorai.010G129400 Gossypium raimondii HOM05D000325 ORTHO05D000583 9.7e-22 108.2 186 47.3
MSTRG.24960 Avicennia marina HOM05D000325 ORTHO05D000583 3.7e-21 106.3 261 39.8
Actinidia15629 Actinidia chinensis HOM05D000325 ORTHO05D000583 4.8e-21 105.9 180 44.4
PGR102G1485 Punica granatum HOM05D000325 ORTHO05D000583 1.1e-20 104.8 259 42.9
Gohir.D06G113600 Gossypium hirsutum HOM05D000325 ORTHO05D000583 7.0e-20 102.1 232 40.1
Eucgr.F04150 Eucalyptus grandis HOM05D000325 ORTHO05D000583 1.6e-19 100.9 297 33.3
Phvul.004G086100 Phaseolus vulgaris HOM05D000325 ORTHO05D000583 1.0e-18 98.2 213 37.1
Lalb_Chr03g0035781 Lupinus albus HOM05D000325 ORTHO05D000583 2.9e-18 96.7 255 38.4
arahy.Tifrunner.gnm1.ann1.SRJ81T Arachis hypogaea HOM05D000325 ORTHO05D000583 6.5e-18 95.5 228 40.8
GSVIVG01001596001 Vitis vinifera HOM05D000325 ORTHO05D000583 6.5e-18 95.5 106 49.1
SalBow7G4286 Salvia bowleyana HOM05D000325 ORTHO05D000583 1.5e-17 94.4 215 44.2
Sc26g0002360 Simmondsia chinensis HOM05D000325 ORTHO05D000583 4.2e-17 92.8 265 38.1
Psat1g093520 Pisum sativum HOM05D000325 ORTHO05D000583 2.1e-16 90.5 320 35.0
MSTRG.24476 Avicennia marina HOM05D000325 ORTHO05D000583 2.7e-16 90.1 251 33.1
EL10Ac1g00867 Beta vulgaris HOM05D000325 ORTHO05D000583 2.7e-16 90.1 225 36.9
ClCG08G003020 Citrullus lanatus HOM05D000325 ORTHO05D000583 2.7e-16 90.1 321 34.0
CsaV3_6G002880 Cucumis sativus L. HOM05D000325 ORTHO05D000583 1.8e-15 87.4 314 35.0
Migut.C00220 Erythranthe guttata HOM05D000325 ORTHO05D000583 3.0e-15 86.7 254 33.1
arahy.Tifrunner.gnm1.ann1.YQZL1S Arachis hypogaea HOM05D000325 ORTHO05D000583 8.8e-15 85.1 284 35.6
MSTRG.945 Avicennia marina HOM05D000325 ORTHO05D000583 1.2e-14 84.7 256 38.7
Oeu036730.1 Olea europaea HOM05D000325 ORTHO05D000583 2.6e-14 83.6 178 44.9
Sed0013859 Sechium edule HOM05D000325 ORTHO05D000583 7.5e-14 82.0 324 34.6
MELO3C026153.2 Cucumis melo HOM05D000325 ORTHO05D000583 9.8e-14 81.6 317 33.4
TPR.G16209 Trifolium pratense HOM05D000325 ORTHO05D000583 9.8e-14 81.6 353 30.9
Oeu027228.1 Olea europaea HOM05D000325 ORTHO05D000583 3.7e-13 79.7 258 35.7
Sed0025546 Sechium edule HOM05D000325 ORTHO05D000583 3.7e-13 79.7 343 30.0
Medtr6g038150 Medicago truncatula HOM05D000325 ORTHO05D000583 1.8e-12 77.4 277 33.9
ATR0564G174 Amborella trichopoda HOM05D000325 ORTHO05D000583 1.6e-11 74.3 189 39.7
THA.LOC104816186 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 2.0e-11 73.9 197 45.7
Ah.12g063980 Amaranthus hybridus HOM05D000325 ORTHO05D000583 1.0e-10 71.6 293 32.8
TWI60G1093 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 2.9e-10 70.1 105 45.7
THA.LOC104806777 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 5.0e-10 69.3 259 35.9
CDE08G1455 Ceratophyllum demersum HOM05D000325 ORTHO05D000583 3.2e-09 66.6 209 32.1
DCAR_019987 Daucus carota HOM05D000325 ORTHO05D000583 3.2e-09 66.6 251 32.3
Hund26660 Selenicereus undatus HOM05D000325 ORTHO05D000583 7.2e-09 65.5 266 35.0
AUR62030666 Chenopodium quinoa HOM05D000325 ORTHO05D000583 2.1e-08 63.9 236 30.1
SalBow6G3856 Salvia bowleyana HOM05D000325 ORTHO05D000583 4.7e-08 62.8 224 35.3
BcaC08g43800 Brassica carinata HOM05D000325 ORTHO05D027058 2.3e-07 60.5 244 35.2
BolC6t36310H Brassica oleracea HOM05D000325 ORTHO05D000583 2.3e-07 60.5 244 35.2
SGA_v2.0_scaffold201G41421 Striga asiatica HOM05D000325 ORTHO05D000583 5.2e-07 59.3 192 38.5
SalBow6G3024 Salvia bowleyana HOM05D000325 ORTHO05D000583 8.8e-07 58.5 204 35.8
CDE02G4704 Ceratophyllum demersum HOM05D000325 ORTHO05D000583 1.5e-06 57.8 232 35.8
ECA247G1322 Erigeron canadensis HOM05D000325 ORTHO05D000583 2.0e-06 57.4 222 35.6
Os08g0175200 Oryza sativa ssp. japonica HOM05D000325 ORTHO05D000583 2.0e-06 57.4 239 32.2
HPP92_024871 Vanilla planifolia HOM05D000325 ORTHO05D000583 2.0e-06 57.4 229 34.9
Zm00001eb414760 Zea mays HOM05D000325 ORTHO05D000583 2.0e-06 57.4 244 29.5
AUR62024881 Chenopodium quinoa HOM05D000325 ORTHO05D000583 3.4e-06 56.6 270 27.0
unitig_37.g13118 Utricularia gibba HOM05D000325 ORTHO05D000583 5.7e-06 55.8 259 31.7


User provided reference genes

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