Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1609 Trochodendron aralioides HOM05D006441 ORTHO05D008203 1.6e-86 322.8 173 100.0
Nn6g34544 Nelumbo nucifera HOM05D006441 ORTHO05D008203 1.3e-51 206.8 174 68.4
GSVIVG01002450001 Vitis vinifera HOM05D006441 ORTHO05D008203 3.4e-44 182.2 175 62.3
Dinv23055 Davidia involucrata HOM05D006441 ORTHO05D008203 1.1e-37 160.6 173 56.1
CSS0036817 Camellia sinensis var. sinensis HOM05D006441 ORTHO05D008203 3.2e-34 149.1 180 56.1
PSO675G4807 Papaver somniferum HOM05D006441 ORTHO05D008203 2.7e-33 146.0 175 52.0
PSO541G6514 Papaver somniferum HOM05D006441 ORTHO05D008203 3.6e-33 145.6 175 52.6
Sopen02g036590 Solanum pennellii HOM05D006441 ORTHO05D008203 1.4e-32 143.7 176 52.3
CDE07G0466 Ceratophyllum demersum HOM05D006441 ORTHO05D008203 8.8e-32 141.0 131 55.7
Solyc02g092010.4 Solanum lycopersicum HOM05D006441 ORTHO05D008203 1.5e-31 140.2 176 51.1
PGSC0003DMG400021428 Solanum tuberosum HOM05D006441 ORTHO05D008203 1.3e-30 137.1 176 50.6
Potri.007G007700 Populus trichocarpa HOM05D006441 ORTHO05D008203 1.7e-30 136.7 117 60.7
Cfa006781 Carpinus fangiana HOM05D006441 ORTHO05D008203 2.8e-30 136.0 175 51.4
Manes.12G118300 Manihot esculenta HOM05D006441 ORTHO05D008203 4.8e-30 135.2 173 49.1
Nitab4.5_0000142g0480 Nicotiana tabacum HOM05D006441 ORTHO05D008203 4.8e-30 135.2 174 50.0
Nitab4.5_0000776g0060 Nicotiana tabacum HOM05D006441 ORTHO05D008203 4.8e-30 135.2 174 50.6
Sed0000343 Sechium edule HOM05D006441 ORTHO05D008203 1.8e-29 133.3 137 53.3
SEGI_39991 Sequoiadendron giganteum HOM05D006441 ORTHO05D008203 2.4e-29 132.9 125 56.8
CsaV3_4G008510 Cucumis sativus L. HOM05D006441 ORTHO05D008203 9.1e-29 131.0 133 58.6
Migut.H00320 Erythranthe guttata HOM05D006441 ORTHO05D008203 1.2e-28 130.6 143 51.0
CiPaw.07G037200 Carya illinoinensis HOM05D007830 ORTHO05D009947 1.5e-28 130.2 174 49.4
Thecc.01G077600 Theobroma cacao HOM05D006441 ORTHO05D008203 2.0e-28 129.8 177 46.9
MELO3C024853.2 Cucumis melo HOM05D006441 ORTHO05D008203 2.6e-28 129.4 178 50.6
ATR0019G023 Amborella trichopoda HOM05D006441 ORTHO05D008203 3.5e-28 129.0 113 59.3
Aqoxy6G02956 Aquilegia oxysepala HOM05D006441 ORTHO05D008203 5.9e-28 128.3 145 48.3
Actinidia36417 Actinidia chinensis HOM05D006441 ORTHO05D008203 1.0e-27 127.5 172 48.3
CANSAT01G2205 Cannabis sativa HOM05D006441 ORTHO05D008203 2.2e-27 126.3 157 52.2
CiPaw.07G037300 Carya illinoinensis HOM05D006441 ORTHO05D008203 2.2e-27 126.3 171 50.3
Gorai.007G227000 Gossypium raimondii HOM05D006441 ORTHO05D008203 2.2e-27 126.3 153 47.7
Lsat_1_v5_gn_3_85860 Lactuca sativa HOM05D006441 ORTHO05D008203 2.2e-27 126.3 172 48.3
Duzib147G0493 Durio zibethinus HOM05D006441 ORTHO05D008203 2.9e-27 125.9 159 47.2
QL06p038630 Quercus lobata HOM05D006441 ORTHO05D008203 2.9e-27 125.9 95 66.3
DCAR_010797 Daucus carota HOM05D006441 ORTHO05D008203 5.0e-27 125.2 139 50.4
THA.LOC104821215 Tarenaya hassleriana HOM05D006441 ORTHO05D008203 5.0e-27 125.2 120 55.0
FAN23G0818 Fragaria x ananassa HOM05D006441 ORTHO05D008203 1.1e-26 124.0 174 46.0
Gohir.D11G211300 Gossypium hirsutum HOM05D006441 ORTHO05D008203 1.1e-26 124.0 153 47.1
FvH4_1g18350 Fragaria vesca HOM05D006441 ORTHO05D008203 1.5e-26 123.6 174 46.6
FAN19G0231 Fragaria x ananassa HOM05D006441 ORTHO05D008203 1.5e-26 123.6 174 46.0
COL.COLO4_11626 Corchorus olitorius HOM05D006441 ORTHO05D008203 2.5e-26 122.9 151 47.7
MSTRG.23600 Avicennia marina HOM05D006441 ORTHO05D008203 5.5e-26 121.7 119 53.8
EL10Ac6g15582 Beta vulgaris HOM05D006441 ORTHO05D008203 5.5e-26 121.7 106 56.6
Eucgr.H02336 Eucalyptus grandis HOM05D006441 ORTHO05D008203 5.5e-26 121.7 94 66.0
MD02G1190600 Malus domestica HOM05D006441 ORTHO05D008203 7.2e-26 121.3 171 49.1
CARHR158800 Cardamine hirsuta HOM05D006441 ORTHO05D008203 9.4e-26 120.9 138 50.0
Gohir.A11G211600 Gossypium hirsutum HOM05D006441 ORTHO05D008203 9.4e-26 120.9 153 47.1
Ciclev10025205m.g Citrus clementina HOM05D006441 ORTHO05D008203 1.6e-25 120.2 142 46.5
HanXRQChr12g0377011 Helianthus annuus HOM05D006441 ORTHO05D008203 1.6e-25 120.2 153 47.7
Sc16g0002790 Simmondsia chinensis HOM05D006441 ORTHO05D008203 1.6e-25 120.2 114 51.8
Atru.chr3.1073 Acer truncatum HOM05D006441 ORTHO05D008203 2.1e-25 119.8 136 48.5
PGR102G2456 Punica granatum HOM05D006441 ORTHO05D008203 2.1e-25 119.8 114 56.1
SGA_v2.0_scaffold269G46276 Striga asiatica HOM05D006441 ORTHO05D008203 2.7e-25 119.4 141 51.1
AL5G29680 Arabidopsis lyrata HOM05D006441 ORTHO05D008203 4.7e-25 118.6 122 52.5
RcHm_v2.0_Chr2g0109051 Rosa chinensis HOM05D006441 ORTHO05D008203 6.1e-25 118.2 174 44.8
Lalb_Chr14g0365131 Lupinus albus HOM05D006441 ORTHO05D008203 8.0e-25 117.9 92 62.0
Zm00001eb055970 Zea mays HOM05D006441 ORTHO05D008203 1.0e-24 117.5 94 62.8
CAN.G1343.13 Capsicum annuum HOM05D006441 ORTHO05D008203 1.4e-24 117.1 121 51.2
HPP92_008937 Vanilla planifolia HOM05D006441 ORTHO05D008203 1.8e-24 116.7 191 40.8
Medtr5g089970 Medicago truncatula HOM05D006441 ORTHO05D008203 3.0e-24 115.9 90 63.3
Carub.0005s1608 Capsella rubella HOM05D006441 ORTHO05D008203 4.0e-24 115.5 177 43.5
Ca_06220_v3 Cicer arietinum L. HOM05D006441 ORTHO05D008203 4.0e-24 115.5 92 62.0
Thhalv10010236m.g Eutrema salsugineum HOM05D006441 ORTHO05D008203 4.0e-24 115.5 172 45.3
Aa31LG4G18210 Aethionema arabicum HOM05D006441 ORTHO05D008203 5.2e-24 115.2 136 48.5
Sabra07G0005900 Salix brachista HOM05D006441 ORTHO05D008203 1.1e-23 114.0 100 62.0
BcaB01g00678 Brassica carinata HOM05D006441 ORTHO05D008203 1.5e-23 113.6 146 45.2
AT3G49725 Arabidopsis thaliana HOM05D006441 ORTHO05D008203 3.3e-23 112.5 122 50.0
LjContig00049g0002658 Lotus japonicus HOM05D006441 ORTHO05D008203 3.3e-23 112.5 112 54.5
BcaC07g39436 Brassica carinata HOM05D006441 ORTHO05D008203 4.4e-23 112.1 150 44.7
Rhsim10G0094400 Rhododendron simsii HOM05D006441 ORTHO05D008203 4.4e-23 112.1 98 60.2
Psat2g019280 Pisum sativum HOM05D006441 ORTHO05D008203 7.5e-23 111.3 135 50.4
FAN26G0165 Fragaria x ananassa HOM05D006441 ORTHO05D008203 1.3e-22 110.5 162 46.9
Cc07_g07440 Coffea canephora HOM05D006441 ORTHO05D008203 2.8e-22 109.4 177 45.8
TPR.G19350 Trifolium pratense HOM05D006441 ORTHO05D008203 2.8e-22 109.4 109 55.0
Sp5g12360 Schrenkiella parvula HOM05D006441 ORTHO05D008203 1.1e-21 107.5 172 43.6
Hund16422 Selenicereus undatus HOM05D006441 ORTHO05D008203 1.1e-21 107.5 105 54.3
TWI53G1431 Tripterygium wilfordii HOM05D006441 ORTHO05D008203 1.1e-21 107.5 171 45.0
Haze_03978 Corylus avellana HOM05D006441 ORTHO05D008203 5.3e-21 105.1 157 47.1
Os03g0727900 Oryza sativa ssp. japonica HOM05D006441 ORTHO05D008203 1.3e-19 100.5 93 55.9
vmacro05378 Vaccinium macrocarpon HOM05D006441 ORTHO05D008203 3.8e-19 99.0 172 44.2
ClCG07G009760 Citrullus lanatus HOM05D006441 ORTHO05D008203 1.5e-18 97.1 109 53.2
Phvul.008G200200 Phaseolus vulgaris HOM05D006441 ORTHO05D008203 5.5e-18 95.1 86 59.3
RcHm_v2.0_Chr1g0321821 Rosa chinensis HOM05D006441 ORTHO05D008203 2.1e-17 93.2 146 45.2
BraA06t24888Z Brassica rapa HOM05D006441 ORTHO05D008203 2.7e-17 92.8 144 43.8
BolC8t50089H Brassica oleracea HOM05D006441 ORTHO05D008203 3.6e-17 92.4 138 42.8
BcaB08g36690 Brassica carinata HOM05D006441 ORTHO05D008203 6.1e-17 91.7 89 52.8
ECA246G2498 Erigeron canadensis HOM05D006441 ORTHO05D008203 8.0e-17 91.3 114 47.4
VMungo0647G1795 Vigna mungo HOM05D006441 ORTHO05D008203 8.0e-17 91.3 86 57.0
CANSAT01G2889 Cannabis sativa HOM05D006441 ORTHO05D008203 1.0e-16 90.9 78 57.7
THA.LOC104810646 Tarenaya hassleriana HOM05D006441 ORTHO05D008203 1.4e-16 90.5 70 62.9
Ah.03g140760 Amaranthus hybridus HOM05D006441 ORTHO05D008203 4.0e-16 89.0 122 43.4
unitig_899.g14592 Utricularia gibba HOM05D006441 ORTHO05D008203 8.8e-16 87.8 78 57.7
Glyma.02G280500 Glycine max HOM05D006441 ORTHO05D008203 3.4e-15 85.9 83 56.6
AUR62007550 Chenopodium quinoa HOM05D006441 ORTHO05D008203 7.5e-15 84.7 159 40.3
Lj4A166T80 Lonicera japonica HOM05D006441 ORTHO05D008203 1.7e-14 83.6 116 44.8
C08p24750 Brassica napus HOM05D006441 ORTHO05D008203 1.8e-13 80.1 151 39.7
A06p17970 Brassica napus HOM05D006441 ORTHO05D008203 2.4e-13 79.7 157 40.8
Prupe.6G215400 Prunus persica HOM05D006441 ORTHO05D008203 4.1e-13 79.0 156 41.0
arahy.Tifrunner.gnm1.ann1.FY2PML Arachis hypogaea HOM05D006441 ORTHO05D008203 1.6e-12 77.0 131 43.5
Mapoly0061s0091 Marchantia polymorpha HOM05D006441 ORTHO05D008203 7.7e-12 74.7 100 41.0
arahy.Tifrunner.gnm1.ann1.H9DIKV Arachis hypogaea HOM05D006441 ORTHO05D008203 1.7e-11 73.6 131 42.0
SMO117G0055 Selaginella moellendorffii HOM05D006441 ORTHO05D008203 2.2e-11 73.2 86 47.7
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 8.5e-11 71.2 86 46.5
Peaxi162Scf00096g01848 Petunia axillaris HOM05D006441 ORTHO05D008203 1.1e-10 70.9 68 57.4
Oeu011414.1 Olea europaea HOM05D006441 ORTHO05D008203 1.7e-06 57.0 41 63.4


User provided reference genes

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