Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.7e-146 521.9 254 100.0
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 3.0e-81 305.8 183 81.4
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 5.5e-75 285.0 185 77.8
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 4.5e-69 265.4 182 74.7
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.5e-67 260.4 182 72.0
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 5.7e-64 248.4 188 67.0
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 5.7e-64 248.4 182 67.6
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 7.5e-64 248.1 182 68.1
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 4.9e-63 245.4 182 66.5
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 2.4e-62 243.0 185 66.5
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 2.4e-62 243.0 183 69.4
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 5.4e-62 241.9 182 67.0
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 1.2e-61 240.7 185 68.6
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 5.9e-61 238.4 190 62.6
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 1.3e-60 237.3 182 65.9
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.7e-60 236.9 182 64.8
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 2.9e-60 236.1 185 64.9
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 5.0e-60 235.3 187 68.4
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 1.1e-59 234.2 182 65.4
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 2.5e-59 233.0 183 65.0
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 2.5e-59 233.0 185 63.8
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 3.3e-59 232.6 182 66.5
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 3.3e-59 232.6 182 64.3
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 5.6e-59 231.9 183 66.7
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 1.6e-58 230.3 185 65.9
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.6e-58 230.3 182 63.7
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 8.0e-58 228.0 182 63.7
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 1.0e-57 227.6 182 63.7
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 1.4e-57 227.3 185 63.2
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 2.3e-57 226.5 185 64.3
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.5e-56 223.8 185 64.9
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 2.0e-56 223.4 186 63.4
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 2.0e-56 223.4 184 64.1
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 4.4e-56 222.2 185 64.9
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 4.4e-56 222.2 186 65.1
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 1.3e-55 220.7 183 63.9
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 2.2e-55 219.9 188 63.3
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.9e-55 219.5 183 61.7
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 2.9e-55 219.5 184 62.5
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 2.9e-55 219.5 185 62.7
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 8.3e-55 218.0 183 61.2
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 8.3e-55 218.0 188 60.1
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 1.4e-54 217.2 183 61.2
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.4e-54 217.2 187 63.1
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 1.4e-54 217.2 184 63.0
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 3.2e-54 216.1 185 62.2
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 7.0e-54 214.9 183 60.7
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.2e-53 214.2 185 63.8
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 1.2e-53 214.2 183 65.0
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 1.2e-53 214.2 183 61.7
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.6e-53 213.8 185 60.0
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 1.6e-53 213.8 185 62.2
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 2.0e-53 213.4 187 59.9
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 2.7e-53 213.0 183 61.2
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.7e-53 213.0 183 61.2
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.5e-53 212.6 185 63.2
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 3.5e-53 212.6 185 61.1
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 4.6e-53 212.2 183 60.1
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 4.6e-53 212.2 184 61.4
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 5.9e-53 211.8 185 63.2
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 5.9e-53 211.8 187 61.0
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 2.3e-52 209.9 183 61.2
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 3.0e-52 209.5 182 59.3
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 3.0e-52 209.5 185 62.7
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 3.0e-52 209.5 188 59.0
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 3.9e-52 209.1 183 60.7
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 3.9e-52 209.1 188 61.2
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 3.9e-52 209.1 191 59.2
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 5.0e-52 208.8 228 53.9
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 6.6e-52 208.4 183 59.0
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 8.6e-52 208.0 188 58.0
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.1e-51 207.6 184 61.4
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 1.5e-51 207.2 189 63.5
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 1.5e-51 207.2 183 59.0
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.9e-51 206.8 186 62.4
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 2.5e-51 206.5 184 60.9
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 3.3e-51 206.1 182 59.9
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 4.3e-51 205.7 198 57.1
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 4.3e-51 205.7 206 56.8
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 5.6e-51 205.3 182 58.8
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 1.6e-50 203.8 184 59.2
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 2.8e-50 203.0 191 58.1
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 3.6e-50 202.6 182 58.8
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 1.0e-49 201.1 185 58.4
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.2e-48 197.6 180 58.9
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 1.2e-48 197.6 188 58.5
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 1.5e-48 197.2 186 57.5
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 3.4e-48 196.1 186 58.6
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 5.8e-48 195.3 185 56.8
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 5.8e-48 195.3 188 55.9
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 7.5e-48 194.9 186 56.5
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 7.5e-48 194.9 194 55.2
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 9.8e-48 194.5 194 57.2
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 8.3e-47 191.4 189 58.2
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 3.2e-46 189.5 185 56.2
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 1.2e-45 187.6 201 54.7
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 7.8e-45 184.9 195 57.9
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 1.3e-44 184.1 205 52.7
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 1.5e-43 180.6 185 55.1
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 1.9e-43 180.3 190 53.7
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 5.6e-43 178.7 186 57.0
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 5.6e-43 178.7 184 53.8
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 2.8e-42 176.4 182 53.8
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 1.1e-41 174.5 184 54.9
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 5.2e-41 172.2 188 52.7
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 5.2e-41 172.2 203 51.7
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 6.8e-41 171.8 147 59.9
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 8.9e-41 171.4 182 54.4
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 2.0e-40 170.2 190 54.7
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.6e-40 169.9 182 53.8
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 7.5e-40 168.3 193 53.9
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 7.5e-40 168.3 188 51.1
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 2.9e-39 166.4 183 51.4
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 3.7e-39 166.0 192 53.6
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 6.4e-39 165.2 190 50.0
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 6.4e-39 165.2 224 49.6
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 4.1e-38 162.5 189 50.3
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.2e-37 161.0 202 52.0
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.2e-37 161.0 186 49.5
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 2.7e-37 159.8 200 46.5
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 4.6e-37 159.1 182 51.1
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 1.0e-36 157.9 182 51.6
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.7e-36 157.1 182 48.4
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 3.0e-36 156.4 192 50.5
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 1.1e-35 154.5 218 43.1
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.5e-35 154.1 182 48.9
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 3.3e-35 152.9 191 49.7
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 3.3e-35 152.9 183 53.0
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 4.3e-35 152.5 195 47.7
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 4.3e-35 152.5 191 46.6
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 4.3e-35 152.5 186 46.8
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 1.2e-34 151.0 183 49.7
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 2.0e-32 143.7 188 45.2
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 3.4e-32 142.9 149 52.3
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 5.8e-32 142.1 186 45.7
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 5.8e-32 142.1 183 48.6
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 2.9e-31 139.8 173 48.0
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 3.8e-31 139.4 183 46.4
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 4.9e-31 139.0 185 45.9
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 8.4e-31 138.3 205 41.5
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 1.9e-30 137.1 182 43.4
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 1.9e-30 137.1 182 43.4
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 2.4e-30 136.7 182 43.4
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 2.4e-30 136.7 182 44.5
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 9.2e-30 134.8 182 42.9
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 2.7e-29 133.3 186 45.7
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 4.6e-29 132.5 188 46.3
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 7.8e-29 131.7 196 45.9
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.3e-28 131.0 186 43.5
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 2.3e-28 130.2 188 45.7
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 3.0e-28 129.8 184 44.0
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 5.1e-28 129.0 182 44.0
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 1.5e-27 127.5 184 43.5
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 2.5e-27 126.7 182 43.4
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 7.3e-27 125.2 186 44.6
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 1.6e-26 124.0 209 41.6
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 2.4e-25 120.2 192 43.2
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 5.2e-25 119.0 204 39.7
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 6.9e-25 118.6 200 45.0
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 3.4e-24 116.3 95 64.2
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 2.2e-23 113.6 182 40.1
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 4.9e-23 112.5 198 41.9
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.1e-22 111.3 147 46.3
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 6.6e-20 102.1 193 38.9
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 3.1e-17 93.2 90 56.7
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 9.9e-16 88.2 147 44.9
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 3.8e-15 86.3 190 38.9
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 3.8e-15 86.3 206 36.9
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 6.4e-15 85.5 157 39.5
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 1.1e-14 84.7 145 44.1
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 6.0e-13 79.0 153 38.6
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 1.3e-12 77.8 143 37.8
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 3.0e-12 76.6 169 39.6
MBI01_g34161_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 5.6e-11 72.4 135 38.5
HPP92_002804 Vanilla planifolia HOM05D003947 ORTHO05D004614 4.0e-09 66.2 120 38.3


User provided reference genes

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