Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.4e-37 159.1 75 100.0
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.0e-24 116.3 57 93.0
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 2.2e-24 115.2 57 91.2
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 6.5e-24 113.6 57 93.0
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 6.5e-24 113.6 57 89.5
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 3.2e-23 111.3 57 86.0
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 4.2e-23 110.9 57 89.5
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 4.2e-23 110.9 57 89.5
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.2e-23 110.2 57 89.5
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.2e-22 109.4 57 89.5
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.2e-22 109.4 57 89.5
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 3.6e-22 107.8 57 87.7
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 3.6e-22 107.8 57 87.7
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.7e-22 107.5 57 87.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 4.7e-22 107.5 56 87.5
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 8.0e-22 106.7 56 87.5
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 8.0e-22 106.7 57 82.5
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 8.0e-22 106.7 56 87.5
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.0e-21 106.3 57 86.0
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.0e-21 106.3 56 85.7
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.0e-21 106.3 56 85.7
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.4e-21 105.9 56 87.5
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 1.4e-21 105.9 57 87.7
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.8e-21 105.5 57 86.0
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.8e-21 105.5 57 86.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 2.3e-21 105.1 56 85.7
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.3e-21 105.1 57 86.0
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.3e-21 105.1 57 87.7
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 3.0e-21 104.8 57 87.7
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 3.9e-21 104.4 56 85.7
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 5.2e-21 104.0 57 84.2
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 6.7e-21 103.6 57 84.2
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 8.8e-21 103.2 56 85.7
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 8.8e-21 103.2 57 86.0
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 3.3e-20 101.3 56 83.9
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.3e-20 101.3 56 82.1
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 4.4e-20 100.9 57 84.2
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 5.7e-20 100.5 57 82.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 5.7e-20 100.5 56 85.7
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.4e-20 100.1 56 83.9
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.4e-20 100.1 56 83.9
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 7.4e-20 100.1 56 83.9
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 7.4e-20 100.1 56 83.9
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 9.7e-20 99.8 57 82.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.3e-19 99.4 56 82.1
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.3e-19 99.4 56 83.9
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.3e-19 99.4 56 83.9
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.3e-19 99.4 56 83.9
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.3e-19 99.4 57 84.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 2.2e-19 98.6 56 82.1
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.8e-19 98.2 56 83.9
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 2.8e-19 98.2 56 80.4
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 80.4
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 80.4
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 80.4
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 80.4
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 80.4
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 80.4
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 4.8e-19 97.4 56 78.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 6.3e-19 97.1 57 78.9
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 6.3e-19 97.1 56 80.4
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.3e-19 97.1 56 78.6
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 6.3e-19 97.1 56 78.6
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 8.2e-19 96.7 57 77.2
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 8.2e-19 96.7 58 75.9
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.1e-18 96.3 56 78.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.4e-18 95.9 56 78.6
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 3.1e-18 94.7 56 80.4
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 3.1e-18 94.7 56 76.8
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 7.0e-18 93.6 56 80.4
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 3.5e-17 91.3 42 90.5
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 3.5e-17 91.3 56 76.8
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 3.5e-17 91.3 57 71.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.5e-17 90.9 57 70.2
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 3.8e-16 87.8 43 90.7
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 1.1e-15 86.3 43 88.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.5e-15 85.9 57 71.9
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.9e-15 85.5 88 55.7
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 2.7e-14 81.6 45 77.8
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.7e-14 81.6 57 63.2
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 3.6e-14 81.3 51 70.6
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 6.1e-14 80.5 57 59.6
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 8.0e-14 80.1 41 80.5
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 1.8e-13 79.0 42 81.0
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.3e-13 78.6 81 53.1
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 1.2e-12 76.3 56 57.1
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.6e-12 75.1 81 49.4
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 3.4e-12 74.7 57 56.1
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 3.4e-12 74.7 56 62.5
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.8e-10 68.9 56 58.9
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.0e-10 67.0 74 52.7
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 7.7e-09 63.5 43 65.1
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.0e-08 63.2 35 82.9
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 2.2e-08 62.0 56 57.1
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 8.5e-08 60.1 31 87.1
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 2.5e-07 58.5 29 89.7
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 4.2e-07 57.8 29 86.2
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.2e-07 57.8 39 69.2
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.6e-06 55.8 29 82.8
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 2.1e-06 55.5 67 46.3


User provided reference genes

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